Author: Yu G

References 28 references

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Yu G, et al. (2023) Genome-wide probing of eukaryotic nascent RNA structure elucidates cotranscriptional folding and its antimutagenic effect. Nat Commun 14(1):5853 PMID:37730811
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Yu G and Klionsky DJ (2022) Life and Death Decisions-The Many Faces of Autophagy in Cell Survival and Cell Death. Biomolecules 12(7) PMID:35883421
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Mo N, et al. (2021) Bidirectional Genetic Control of Phenotypic Heterogeneity and Its Implication for Cancer Drug Resistance. Mol Biol Evol 38(5):1874-1887 PMID:33355660
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Yu G, et al. (2020) NMFGO: Gene Function Prediction via Nonnegative Matrix Factorization with Gene Ontology. IEEE/ACM Trans Comput Biol Bioinform 17(1):238-249 PMID:30059316
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Yu G, et al. (2019) Yeast R2TP Interacts with Extended Termini of Client Protein Nop58p. Sci Rep 9(1):20228 PMID:31882871
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Liang Z, et al. (2018) The N⁶-adenine methylation in yeast genome profiled by single-molecule technology. J Genet Genomics 45(4):223-225 PMID:29685735
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Yu G, et al. (2018) The multistructural forms of box C/D ribonucleoprotein particles. RNA 24(12):1625-1633 PMID:30254138
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Tian S, et al. (2017) Pih1p-Tah1p Puts a Lid on Hexameric AAA+ ATPases Rvb1/2p. Structure 25(10):1519-1529.e4 PMID:28919439
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Wang J, et al. (2017) Protein-Protein Interactions Prediction Using a Novel Local Conjoint Triad Descriptor of Amino Acid Sequences. Int J Mol Sci 18(11) PMID:29117139
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Yu G, et al. (2017) HashGO: hashing gene ontology for protein function prediction. Comput Biol Chem 71:264-273 PMID:29031869
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Yu G, et al. (2017) NoGOA: predicting noisy GO annotations using evidences and sparse representation. BMC Bioinformatics 18(1):350 PMID:28732468
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Wang N, et al. (2016) Mathematical modelling of transcriptional heterogeneity identifies novel markers and subpopulations in complex tissues. Sci Rep 6:18909 PMID:26739359
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Yu G, et al. (2016) Predicting Protein Function via Semantic Integration of Multiple Networks. IEEE/ACM Trans Comput Biol Bioinform 13(2):220-32 PMID:26800544
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Yu G, et al. (2015) Predicting protein function via downward random walks on a gene ontology. BMC Bioinformatics 16:271 PMID:26310806
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Yu G, et al. (2015) Integrating multiple networks for protein function prediction. BMC Syst Biol 9 Suppl 1(Suppl 1):S3 PMID:25707434
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Yu G, et al. (2012) clusterProfiler: an R package for comparing biological themes among gene clusters. OMICS 16(5):284-7 PMID:22455463
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Yu G, et al. (2010) GOSemSim: an R package for measuring semantic similarity among GO terms and gene products. Bioinformatics 26(7):976-8 PMID:20179076
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Swiston J, et al. (1995) Differential expression of CAP and CAP2 in adult rat tissues. Gene 165(2):273-7 PMID:8522189
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Yu G, et al. (1995) The essential transcription factor, Mcm1, is a downstream target of Sln1, a yeast "two-component" regulator. J Biol Chem 270(15):8739-43 PMID:7721779
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Yu G, et al. (1994) The Schizosaccharomyces pombe pka1 gene, encoding a homolog of cAMP-dependent protein kinase. Gene 151(1-2):215-20 PMID:7828877
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Yu G, et al. (1994) Comparison of human CAP and CAP2, homologs of the yeast adenylyl cyclase-associated proteins. J Cell Sci 107 ( Pt 6):1671-8 PMID:7962207
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Yu G and Fassler JS (1993) SPT13 (GAL11) of Saccharomyces cerevisiae negatively regulates activity of the MCM1 transcription factor in Ty1 elements. Mol Cell Biol 13(1):63-71 PMID:8380229
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