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  • Author: Shukla A
  • References

Author: Shukla A


References 23 references


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  • Arimbasseri AG, et al. (2024) Increased histone acetylation is the signature of repressed state on the genes transcribed by RNA polymerase III. Gene 893:147958 PMID:37923095
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  • Klöckner C, et al. (2022) Bi-allelic variants in CHKA cause a neurodevelopmental disorder with epilepsy and microcephaly. Brain 145(6):1916-1923 PMID:35202461
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  • Maiti A, et al. (2021) Cigarette smoke affects ESCRT-mediated vacuolar activity in Saccharomyces cerevisiae. Toxicol Lett 338:97-104 PMID:33309995
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  • Shukla A, et al. (2020) Transcription-dependent enrichment of the yeast FACT complex influences nucleosome dynamics on the RNA polymerase III-transcribed genes. RNA 27(3):273-90 PMID:33277439
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  • Bhalla P, et al. (2019) Yeast PAF1 complex counters the pol III accumulation and replication stress on the tRNA genes. Sci Rep 9(1):12892 PMID:31501524
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  • Deshpande AA, et al. (2018) A Genetic Screen for Investigating the Human Lysosomal CystineTransporter, Cystinosin. Sci Rep 8(1):3442 PMID:29467429
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  • Shukla A and Bhargava P (2018) Regulation of tRNA gene transcription by the chromatin structure and nucleosome dynamics. Biochim Biophys Acta Gene Regul Mech 1861(4):295-309 PMID:29313808
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  • Belagal P, et al. (2016) Decoding the principles underlying the frequency of association with nucleoli for RNA polymerase III-transcribed genes in budding yeast. Mol Biol Cell 27(20):3164-3177 PMID:27559135
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  • Durairaj G, et al. (2014) Sus1p facilitates pre-initiation complex formation at the SAGA-regulated genes independently of histone H2B de-ubiquitylation. J Mol Biol 426(16):2928-2941 PMID:24911582
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  • Albert B, et al. (2013) Systematic characterization of the conformation and dynamics of budding yeast chromosome XII. J Cell Biol 202(2):201-10 PMID:23878273
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  • Shukla A, et al. (2012) Sgf29p facilitates the recruitment of TATA box binding protein but does not alter SAGA's global structural integrity in vivo. Biochemistry 51(2):706-14 PMID:22224423
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  • Lahudkar S, et al. (2011) The mRNA cap-binding complex stimulates the formation of pre-initiation complex at the promoter via its interaction with Mot1p in vivo. Nucleic Acids Res 39(6):2188-209 PMID:21075799
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  • Durairaj G, et al. (2010) Regulation of chromatin assembly/disassembly by Rtt109p, a histone H3 Lys56-specific acetyltransferase, in vivo. J Biol Chem 285(40):30472-9 PMID:20668333
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  • Malik S, et al. (2010) Rad26p, a transcription-coupled repair factor, is recruited to the site of DNA lesion in an elongating RNA polymerase II-dependent manner in vivo. Nucleic Acids Res 38(5):1461-77 PMID:20007604
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  • Malik S, et al. (2009) The 19 s proteasome subcomplex establishes a specific protein interaction network at the promoter for stimulated transcriptional initiation in vivo. J Biol Chem 284(51):35714-24 PMID:19843524
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  • Shukla A, et al. (2009) Stimulation of mRNA export by an F-box protein, Mdm30p, in vivo. J Mol Biol 389(2):238-47 PMID:19376128
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  • Lee JS, et al. (2007) Histone crosstalk between H2B monoubiquitination and H3 methylation mediated by COMPASS. Cell 131(6):1084-96 PMID:18083099
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  • Shukla A and Bhaumik SR (2007) H2B-K123 ubiquitination stimulates RNAPII elongation independent of H3-K4 methylation. Biochem Biophys Res Commun 359(2):214-20 PMID:17543890
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  • Wood A, et al. (2007) Ctk complex-mediated regulation of histone methylation by COMPASS. Mol Cell Biol 27(2):709-20 PMID:17088385
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  • Shukla A, et al. (2006) Functional analysis of H2B-Lys-123 ubiquitination in regulation of H3-Lys-4 methylation and recruitment of RNA polymerase II at the coding sequences of several active genes in vivo. J Biol Chem 281(28):19045-54 PMID:16675445
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  • Shukla A, et al. (2006) SAGA-associated Sgf73p facilitates formation of the preinitiation complex assembly at the promoters either in a HAT-dependent or independent manner in vivo. Nucleic Acids Res 34(21):6225-32 PMID:17090597
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  • Shukla A, et al. (2006) Ubp8p, a histone deubiquitinase whose association with SAGA is mediated by Sgf11p, differentially regulates lysine 4 methylation of histone H3 in vivo. Mol Cell Biol 26(9):3339-52 PMID:16611979
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  • Shukla A and Guptasarma P (2004) Folding of beta/alpha-unit scrambled forms of S. cerevisiae triosephosphate isomerase: Evidence for autonomy of substructure formation and plasticity of hydrophobic and hydrogen bonding interactions in core of (beta/alpha)8-barrel. Proteins 55(3):548-57 PMID:15103619
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