Literature Help
ZIP2 / YGL249W Literature
All manually curated literature for the specified gene, organized by relevance to the gene and by
association with specific annotations to the gene in SGD. SGD gathers references via a PubMed search for
papers whose titles or abstracts contain “yeast” or “cerevisiae;” these papers are reviewed manually and
linked to relevant genes and literature topics by SGD curators.
Primary Literature
Literature that either focuses on the gene or contains information about function, biological role,
cellular location, phenotype, regulation, structure, or disease homologs in other species for the gene
or gene product.
No primary literature curated.
Download References (.nbib)
- Arora K and Corbett KD (2019) The conserved XPF:ERCC1-like Zip2:Spo16 complex controls meiotic crossover formation through structure-specific DNA binding. Nucleic Acids Res 47(5):2365-2376 PMID:30566683
- Segura-Wang M, et al. (2017) Systematic Identification of Determinants for Single-Strand Annealing-Mediated Deletion Formation in Saccharomyces cerevisiae. G3 (Bethesda) 7(10):3269-3279 PMID:28818866
- Voelkel-Meiman K, et al. (2016) Synaptonemal Complex Proteins of Budding Yeast Define Reciprocal Roles in MutSγ-Mediated Crossover Formation. Genetics 203(3):1091-103 PMID:27184389
- Voelkel-Meiman K, et al. (2015) Separable Crossover-Promoting and Crossover-Constraining Aspects of Zip1 Activity during Budding Yeast Meiosis. PLoS Genet 11(6):e1005335 PMID:26114667
- Humphryes N, et al. (2013) The Ecm11-Gmc2 complex promotes synaptonemal complex formation through assembly of transverse filaments in budding yeast. PLoS Genet 9(1):e1003194 PMID:23326245
- Tkach JM, et al. (2012) Dissecting DNA damage response pathways by analysing protein localization and abundance changes during DNA replication stress. Nat Cell Biol 14(9):966-76 PMID:22842922
- Gelfand B, et al. (2011) Regulated antisense transcription controls expression of cell-type-specific genes in yeast. Mol Cell Biol 31(8):1701-9 PMID:21300780
- Newnham L, et al. (2010) The synaptonemal complex protein, Zip1, promotes the segregation of nonexchange chromosomes at meiosis I. Proc Natl Acad Sci U S A 107(2):781-5 PMID:20080752
- Ottosson LG, et al. (2010) Sulfate assimilation mediates tellurite reduction and toxicity in Saccharomyces cerevisiae. Eukaryot Cell 9(10):1635-47 PMID:20675578
- Chan AC, et al. (2009) Temperature-dependent modulation of chromosome segregation in msh4 mutants of budding yeast. PLoS One 4(10):e7284 PMID:19816584
- Macqueen AJ and Roeder GS (2009) Fpr3 and Zip3 ensure that initiation of meiotic recombination precedes chromosome synapsis in budding yeast. Curr Biol 19(18):1519-26 PMID:19765989
- Chen SY, et al. (2008) Global analysis of the meiotic crossover landscape. Dev Cell 15(3):401-415 PMID:18691940
- Tsubouchi T, et al. (2008) Initiation of meiotic chromosome synapsis at centromeres in budding yeast. Genes Dev 22(22):3217-26 PMID:19056898
- Jessop L, et al. (2006) Meiotic chromosome synapsis-promoting proteins antagonize the anti-crossover activity of sgs1. PLoS Genet 2(9):e155 PMID:17002499
- Tsubouchi T, et al. (2006) The meiosis-specific zip4 protein regulates crossover distribution by promoting synaptonemal complex formation together with zip2. Dev Cell 10(6):809-19 PMID:16740482
- Peoples-Holst TL and Burgess SM (2005) Multiple branches of the meiotic recombination pathway contribute independently to homolog pairing and stable juxtaposition during meiosis in budding yeast. Genes Dev 19(7):863-74 PMID:15805472
- Perry J, et al. (2005) Bioinformatic analyses implicate the collaborating meiotic crossover/chiasma proteins Zip2, Zip3, and Spo22/Zip4 in ubiquitin labeling. Proc Natl Acad Sci U S A 102(49):17594-9 PMID:16314568
- Börner GV, et al. (2004) Crossover/noncrossover differentiation, synaptonemal complex formation, and regulatory surveillance at the leptotene/zygotene transition of meiosis. Cell 117(1):29-45 PMID:15066280
- Novak JE, et al. (2001) The budding yeast Msh4 protein functions in chromosome synapsis and the regulation of crossover distribution. Genetics 158(3):1013-25 PMID:11454751
- Agarwal S and Roeder GS (2000) Zip3 provides a link between recombination enzymes and synaptonemal complex proteins. Cell 102(2):245-55 PMID:10943844
- Bailis JM, et al. (2000) Bypass of a meiotic checkpoint by overproduction of meiotic chromosomal proteins. Mol Cell Biol 20(13):4838-48 PMID:10848609
- San-Segundo PA and Roeder GS (1999) Pch2 links chromatin silencing to meiotic checkpoint control. Cell 97(3):313-24 PMID:10319812
- Chua PR and Roeder GS (1998) Zip2, a meiosis-specific protein required for the initiation of chromosome synapsis. Cell 93(3):349-59 PMID:9590170
Related Literature
Genes that share literature (indicated by the purple circles) with the specified gene (indicated by yellow circle).
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Additional Literature
Papers that show experimental evidence for the gene or describe homologs in other species, but
for which the gene is not the paper’s principal focus.
No additional literature curated.
Download References (.nbib)
- Park ZM, et al. (2023) Kar4 is required for the normal pattern of meiotic gene expression. PLoS Genet 19(8):e1010898 PMID:37639444
- Nandanan KG, et al. (2021) Regulation of Msh4-Msh5 association with meiotic chromosomes in budding yeast. Genetics 219(2) PMID:34849874
- Zhang Q, et al. (2019) SPO16 binds SHOC1 to promote homologous recombination and crossing-over in meiotic prophase I. Sci Adv 5(1):eaau9780 PMID:30746471
- De Muyt A, et al. (2018) A meiotic XPF-ERCC1-like complex recognizes joint molecule recombination intermediates to promote crossover formation. Genes Dev 32(3-4):283-296 PMID:29440262
- Guiraldelli MF, et al. (2018) SHOC1 is a ERCC4-(HhH)2-like protein, integral to the formation of crossover recombination intermediates during mammalian meiosis. PLoS Genet 14(5):e1007381 PMID:29742103
- Zhang Q, et al. (2018) Evolutionarily-conserved MZIP2 is essential for crossover formation in mammalian meiosis. Commun Biol 1:147 PMID:30272023
- Lardenois A, et al. (2015) Global alterations of the transcriptional landscape during yeast growth and development in the absence of Ume6-dependent chromatin modification. Mol Genet Genomics 290(5):2031-46 PMID:25957495
- Macaisne N, et al. (2011) SHOC1 and PTD form an XPF-ERCC1-like complex that is required for formation of class I crossovers. J Cell Sci 124(Pt 16):2687-91 PMID:21771883
- Scannell DR, et al. (2011) The Awesome Power of Yeast Evolutionary Genetics: New Genome Sequences and Strain Resources for the Saccharomyces sensu stricto Genus. G3 (Bethesda) 1(1):11-25 PMID:22384314
- Chuong H and Dawson DS (2010) Meiotic cohesin promotes pairing of nonhomologous centromeres in early meiotic prophase. Mol Biol Cell 21(11):1799-809 PMID:20375150
- Zhu Z, et al. (2010) Cyclin-dependent kinase promotes formation of the synaptonemal complex in yeast meiosis. Genes Cells 15(10):1036-50 PMID:20825495
- Hontz RD, et al. (2009) Genetic identification of factors that modulate ribosomal DNA transcription in Saccharomyces cerevisiae. Genetics 182(1):105-19 PMID:19270272
- McCue PP and Phang JM (2008) Identification of human intracellular targets of the medicinal Herb St. John's Wort by chemical-genetic profiling in yeast. J Agric Food Chem 56(22):11011-7 PMID:18975972
- Fung JC, et al. (2004) Imposition of crossover interference through the nonrandom distribution of synapsis initiation complexes. Cell 116(6):795-802 PMID:15035982
- Briza P, et al. (2002) Systematic analysis of sporulation phenotypes in 624 non-lethal homozygous deletion strains of Saccharomyces cerevisiae. Yeast 19(5):403-22 PMID:11921089
- Seol JH, et al. (2001) Skp1 forms multiple protein complexes, including RAVE, a regulator of V-ATPase assembly. Nat Cell Biol 3(4):384-91 PMID:11283612
Reviews
No reviews curated.
Download References (.nbib)
- Grey C and de Massy B (2022) Coupling crossover and synaptonemal complex in meiosis. Genes Dev 36(1-2):4-6 PMID:35022326
- Láscarez-Lagunas L, et al. (2020) SnapShot: Meiosis - Prophase I. Cell 181(6):1442-1442.e1 PMID:32531249
- Hong S, et al. (2019) The nature of meiotic chromosome dynamics and recombination in budding yeast. J Microbiol 57(4):221-231 PMID:30671743
- Pyatnitskaya A, et al. (2019) Crossing and zipping: molecular duties of the ZMM proteins in meiosis. Chromosoma 128(3):181-198 PMID:31236671
- Chakraborty P, et al. (2018) Genome wide analysis of meiotic recombination in yeast: For a few SNPs more. IUBMB Life 70(8):743-752 PMID:29934971
- Gao J and Colaiácovo MP (2018) Zipping and Unzipping: Protein Modifications Regulating Synaptonemal Complex Dynamics. Trends Genet 34(3):232-245 PMID:29290403
- Till P, et al. (2018) A current view on long noncoding RNAs in yeast and filamentous fungi. Appl Microbiol Biotechnol 102(17):7319-7331 PMID:29974182
- Obeso D, et al. (2014) Couples, pairs, and clusters: mechanisms and implications of centromere associations in meiosis. Chromosoma 123(1-2):43-55 PMID:24126501
- Phadnis N, et al. (2011) New and old ways to control meiotic recombination. Trends Genet 27(10):411-21 PMID:21782271
- Székvölgyi L and Nicolas A (2010) From meiosis to postmeiotic events: homologous recombination is obligatory but flexible. FEBS J 277(3):571-89 PMID:20015080
- Stahl FW and Housworth EA (2009) Methods for analysis of crossover interference in Saccharomyces cerevisiae. Methods Mol Biol 557:35-53 PMID:19799175
- Holloman WK, et al. (2008) The homologous recombination system of Ustilago maydis. Fungal Genet Biol 45 Suppl 1(Suppl 1):S31-9 PMID:18502156
- Lynn A, et al. (2007) ZMM proteins during meiosis: crossover artists at work. Chromosome Res 15(5):591-605 PMID:17674148
- Hochwagen A and Amon A (2006) Checking your breaks: surveillance mechanisms of meiotic recombination. Curr Biol 16(6):R217-28 PMID:16546077
- de Carvalho CE and Colaiácovo MP (2006) SUMO-mediated regulation of synaptonemal complex formation during meiosis. Genes Dev 20(15):1986-92 PMID:16882975
- Anuradha S and Muniyappa K (2005) Molecular aspects of meiotic chromosome synapsis and recombination. Prog Nucleic Acid Res Mol Biol 79:49-132 PMID:16096027
- Bishop DK and Zickler D (2004) Early decision; meiotic crossover interference prior to stable strand exchange and synapsis. Cell 117(1):9-15 PMID:15066278
Gene Ontology Literature
Paper(s) associated with one or more GO (Gene Ontology) terms in SGD for the specified gene.
No gene ontology literature curated.
Download References (.nbib)
- Arora K and Corbett KD (2019) The conserved XPF:ERCC1-like Zip2:Spo16 complex controls meiotic crossover formation through structure-specific DNA binding. Nucleic Acids Res 47(5):2365-2376 PMID:30566683
- Humphryes N, et al. (2013) The Ecm11-Gmc2 complex promotes synaptonemal complex formation through assembly of transverse filaments in budding yeast. PLoS Genet 9(1):e1003194 PMID:23326245
- Tkach JM, et al. (2012) Dissecting DNA damage response pathways by analysing protein localization and abundance changes during DNA replication stress. Nat Cell Biol 14(9):966-76 PMID:22842922
- Peoples-Holst TL and Burgess SM (2005) Multiple branches of the meiotic recombination pathway contribute independently to homolog pairing and stable juxtaposition during meiosis in budding yeast. Genes Dev 19(7):863-74 PMID:15805472
- Börner GV, et al. (2004) Crossover/noncrossover differentiation, synaptonemal complex formation, and regulatory surveillance at the leptotene/zygotene transition of meiosis. Cell 117(1):29-45 PMID:15066280
- Chua PR and Roeder GS (1998) Zip2, a meiosis-specific protein required for the initiation of chromosome synapsis. Cell 93(3):349-59 PMID:9590170
Phenotype Literature
Paper(s) associated with one or more pieces of classical phenotype evidence in SGD for the specified gene.
No phenotype literature curated.
Download References (.nbib)
- Ottosson LG, et al. (2010) Sulfate assimilation mediates tellurite reduction and toxicity in Saccharomyces cerevisiae. Eukaryot Cell 9(10):1635-47 PMID:20675578
- Chan AC, et al. (2009) Temperature-dependent modulation of chromosome segregation in msh4 mutants of budding yeast. PLoS One 4(10):e7284 PMID:19816584
- Börner GV, et al. (2004) Crossover/noncrossover differentiation, synaptonemal complex formation, and regulatory surveillance at the leptotene/zygotene transition of meiosis. Cell 117(1):29-45 PMID:15066280
- Chua PR and Roeder GS (1998) Zip2, a meiosis-specific protein required for the initiation of chromosome synapsis. Cell 93(3):349-59 PMID:9590170
Interaction Literature
Paper(s) associated with evidence supporting a physical or genetic interaction between the
specified gene and another gene in SGD. Currently, all interaction evidence is obtained from
BioGRID.
No interaction literature curated.
Download References (.nbib)
- Michaelis AC, et al. (2023) The social and structural architecture of the yeast protein interactome. Nature 624(7990):192-200 PMID:37968396
- Mishra PK, et al. (2023) Misregulation of cell cycle-dependent methylation of budding yeast CENP-A contributes to chromosomal instability. Mol Biol Cell 34(10):ar99 PMID:37436802
- Gutiérrez-Santiago F, et al. (2022) A High-Copy Suppressor Screen Reveals a Broad Role of Prefoldin-like Bud27 in the TOR Signaling Pathway in Saccharomyces cerevisiae. Genes (Basel) 13(5) PMID:35627133
- Pyatnitskaya A, et al. (2022) The Zip4 protein directly couples meiotic crossover formation to synaptonemal complex assembly. Genes Dev 36(1-2):53-69 PMID:34969823
- Arora K and Corbett KD (2019) The conserved XPF:ERCC1-like Zip2:Spo16 complex controls meiotic crossover formation through structure-specific DNA binding. Nucleic Acids Res 47(5):2365-2376 PMID:30566683
- De Muyt A, et al. (2018) A meiotic XPF-ERCC1-like complex recognizes joint molecule recombination intermediates to promote crossover formation. Genes Dev 32(3-4):283-296 PMID:29440262
- Kuzmin E, et al. (2018) Systematic analysis of complex genetic interactions. Science 360(6386) PMID:29674565
- Makrantoni V, et al. (2017) A Functional Link Between Bir1 and the Saccharomyces cerevisiae Ctf19 Kinetochore Complex Revealed Through Quantitative Fitness Analysis. G3 (Bethesda) 7(9):3203-3215 PMID:28754723
- Babour A, et al. (2016) The Chromatin Remodeler ISW1 Is a Quality Control Factor that Surveys Nuclear mRNP Biogenesis. Cell 167(5):1201-1214.e15 PMID:27863241
- Costanzo M, et al. (2016) A global genetic interaction network maps a wiring diagram of cellular function. Science 353(6306) PMID:27708008
- Costanzo M, et al. (2010) The genetic landscape of a cell. Science 327(5964):425-31 PMID:20093466
- Batisse J, et al. (2009) Purification of nuclear poly(A)-binding protein Nab2 reveals association with the yeast transcriptome and a messenger ribonucleoprotein core structure. J Biol Chem 284(50):34911-7 PMID:19840948
- Colomina N, et al. (2008) Whi3, a developmental regulator of budding yeast, binds a large set of mRNAs functionally related to the endoplasmic reticulum. J Biol Chem 283(42):28670-9 PMID:18667435
- Collins SR, et al. (2007) Functional dissection of protein complexes involved in yeast chromosome biology using a genetic interaction map. Nature 446(7137):806-10 PMID:17314980
- Novak JE, et al. (2001) The budding yeast Msh4 protein functions in chromosome synapsis and the regulation of crossover distribution. Genetics 158(3):1013-25 PMID:11454751
- Seol JH, et al. (2001) Skp1 forms multiple protein complexes, including RAVE, a regulator of V-ATPase assembly. Nat Cell Biol 3(4):384-91 PMID:11283612
- Agarwal S and Roeder GS (2000) Zip3 provides a link between recombination enzymes and synaptonemal complex proteins. Cell 102(2):245-55 PMID:10943844
- Bailis JM, et al. (2000) Bypass of a meiotic checkpoint by overproduction of meiotic chromosomal proteins. Mol Cell Biol 20(13):4838-48 PMID:10848609
- Uetz P, et al. (2000) A comprehensive analysis of protein-protein interactions in Saccharomyces cerevisiae. Nature 403(6770):623-7 PMID:10688190
- San-Segundo PA and Roeder GS (1999) Pch2 links chromatin silencing to meiotic checkpoint control. Cell 97(3):313-24 PMID:10319812
Regulation Literature
Paper(s) associated with one or more pieces of regulation evidence in SGD, as found on the
Regulation page.
No regulation literature curated.
Post-translational Modifications Literature
Paper(s) associated with one or more pieces of post-translational modifications evidence in SGD.
No post-translational modifications literature curated.
High-Throughput Literature
Paper(s) associated with one or more pieces of high-throughput evidence in SGD.
No high-throughput literature curated.
Download References (.nbib)
- Harris A and Ünal E (2023) The transcriptional regulator Ume6 is a major driver of early gene expression during gametogenesis. Genetics 225(2) PMID:37431893
- Hendry JA, et al. (2015) Leveraging DNA damage response signaling to identify yeast genes controlling genome stability. G3 (Bethesda) 5(5):997-1006 PMID:25721128
- Gaupel AC, et al. (2014) High throughput screening identifies modulators of histone deacetylase inhibitors. BMC Genomics 15(1):528 PMID:24968945
- de Castro PA, et al. (2011) Molecular characterization of propolis-induced cell death in Saccharomyces cerevisiae. Eukaryot Cell 10(3):398-411 PMID:21193549
- Breslow DK, et al. (2008) A comprehensive strategy enabling high-resolution functional analysis of the yeast genome. Nat Methods 5(8):711-8 PMID:18622397
- McCue PP and Phang JM (2008) Identification of human intracellular targets of the medicinal Herb St. John's Wort by chemical-genetic profiling in yeast. J Agric Food Chem 56(22):11011-7 PMID:18975972
- Lum PY, et al. (2004) Discovering modes of action for therapeutic compounds using a genome-wide screen of yeast heterozygotes. Cell 116(1):121-37 PMID:14718172
- Briza P, et al. (2002) Systematic analysis of sporulation phenotypes in 624 non-lethal homozygous deletion strains of Saccharomyces cerevisiae. Yeast 19(5):403-22 PMID:11921089
- Deutschbauer AM, et al. (2002) Parallel phenotypic analysis of sporulation and postgermination growth in Saccharomyces cerevisiae. Proc Natl Acad Sci U S A 99(24):15530-5 PMID:12432101
- Giaever G, et al. (2002) Functional profiling of the Saccharomyces cerevisiae genome. Nature 418(6896):387-91 PMID:12140549