Phenotype annotations for a gene are curated single mutant phenotypes that require an observable (e.g., "cell shape"), a qualifier (e.g., "abnormal"), a mutant type (e.g., null), strain background, and a reference. In addition, annotations are classified as classical genetics or high-throughput (e.g., large scale survey, systematic mutation set). Whenever possible, allele information and additional details are provided.
A phenotype is defined as an observable (e.g., apoptosis) and a qualifier (e.g., increased). There may be more than one row with the same phenotype if that phenotype was observed in separate studies or in different conditions, strains, alleles, etc.
15 entries for 6 phenotypesIncrease the total number of rows showing on this page using the pull-down located below the table, or use the page scroll at the table's top right to browse through the table's pages; use the arrows to the right of a column header to sort by that column; filter the table using the "Filter" box at the top of the table; click on the small "i" buttons located within a cell for an annotation to view further details.
| Phenotype | Experiment Type | Mutant Information | Strain Background | Chemical | Details | Reference |
|---|---|---|---|---|---|---|
| chromosome/plasmid maintenance: decreased | heterozygous diploid, systematic mutation set | null Allele: prp8-Δ | S288C | Assay: diploid bimater (BiM) assay Details: haploinsufficiency results in chromosome instability (CIN); scored >= 2 standard deviations above the mean | Choy JS, et al. (2013) PMID:23825022 | |
| cold sensitivity: increased | classical genetics | reduction of function Allele: prp8-R1753K | Other | Temperature: reduced temperature, 16 °C | van der Feltz C, et al. (2021) PMID:33547186 | |
| cold sensitivity: increased | classical genetics | reduction of function Allele: prp8-E1960K | Other | Temperature: reduced temperature, 23 °C | van der Feltz C, et al. (2021) PMID:33547186 | |
| heat sensitivity: increased | classical genetics | conditional | Other | Temperature: elevated temperature, 36 °C | Hartwell LH, et al. (1970) PMID:5488085 | |
| heat sensitivity: increased | classical genetics | reduction of function Allele: prp8-R1753K | Other | Temperature: elevated temperature, 37 °C | van der Feltz C, et al. (2021) PMID:33547186 | |
| heat sensitivity: increased | classical genetics | conditional Allele: prp8-1 | Other | Temperature: elevated temperature, 33 °C | Pleiss JA, et al. (2007) PMID:17388687 | |
| heat sensitivity: increased | classical genetics | reduction of function Allele: prp8-H2387P corresponds to human prp8-H2309P implicated in retinitis pigmentosa | Other | Temperature: elevated temperature, 37 °C | Mayerle M and Guthrie C (2016) PMID:26968627 | |
| inviable | classical genetics | null Allele: prp8-Δ | Other | Jackson SP, et al. (1988) PMID:2835658 | ||
| RNA accumulation: increased Reporter: actin pre-mRNA | classical genetics | conditional Allele: prp8-(rna8-1) | Other | Temperature: elevated temperature, 36 °C | Jackson SP, et al. (1988) PMID:2835658 | |
| RNA accumulation: increased Reporter: pre-mRNA | classical genetics | reduction of function Allele: prp8-S2197F corresponds to human prp8-S2117F implicated in retinitis pigmentosa | Other | Details: indicative of broad splicing defect | Mayerle M and Guthrie C (2016) PMID:26968627 |
This diagram displays phenotype observables (purple squares) that are shared between the given gene (yellow circle) and other genes (gray circles) based on the number of phenotype observables shared (adjustable using the slider at the bottom).
Click on a gene or phenotype observable name to go to its specific page within SGD; drag any of the gene or observable objects around within the visualization for easier viewing; click “Reset” to automatically redraw the diagram; filter the genes that share observable terms with the given gene by the number of terms they share by clicking anywhere on the slider bar or dragging the tab to the desired filter number.
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