Huang MY, et al. (2022) Short homology-directed repair using optimized Cas9 in the pathogen Cryptococcus neoformans enables rapid gene deletion and tagging. Genetics 220(1) PMID:34791226
Burke JE, et al. (2019) A Non-Dicer RNase III and Four Other Novel Factors Required for RNAi-Mediated Transposon Suppression in the Human Pathogenic Yeast Cryptococcus neoformans. G3 (Bethesda) 9(7):2235-2244 PMID:31092606
Brown JC and Madhani HD (2012) Approaching the functional annotation of fungal virulence factors using cross-species genetic interaction profiling. PLoS Genet 8(12):e1003168 PMID:23300468
Xu M, et al. (2012) Timing of transcriptional quiescence during gametogenesis is controlled by global histone H3K4 demethylation. Dev Cell 23(5):1059-71 PMID:23123093
Charles GM, et al. (2011) Site-specific acetylation mark on an essential chromatin-remodeling complex promotes resistance to replication stress. Proc Natl Acad Sci U S A 108(26):10620-5 PMID:21673141
Bao MZ, et al. (2010) Multisite phosphorylation of the Saccharomyces cerevisiae filamentous growth regulator Tec1 is required for its recognition by the E3 ubiquitin ligase adaptor Cdc4 and its subsequent destruction in vivo. Eukaryot Cell 9(1):31-6 PMID:19897738
McCullagh E, et al. (2010) Coordinate control of gene expression noise and interchromosomal interactions in a MAP kinase pathway. Nat Cell Biol 12(10):954-62 PMID:20852627
Hwang WW and Madhani HD (2009) Nonredundant requirement for multiple histone modifications for the early anaphase release of the mitotic exit regulator Cdc14 from nucleolar chromatin. PLoS Genet 5(8):e1000588 PMID:19662160
Shock TR, et al. (2009) Hog1 mitogen-activated protein kinase (MAPK) interrupts signal transduction between the Kss1 MAPK and the Tec1 transcription factor to maintain pathway specificity. Eukaryot Cell 8(4):606-16 PMID:19218425
Breslow DK, et al. (2008) A comprehensive strategy enabling high-resolution functional analysis of the yeast genome. Nat Methods 5(8):711-8 PMID:18622397
Raisner RM and Madhani HD (2008) Genomewide screen for negative regulators of sirtuin activity in Saccharomyces cerevisiae reveals 40 loci and links to metabolism. Genetics 179(4):1933-44 PMID:18689887
Tompa R and Madhani HD (2007) Histone H3 lysine 36 methylation antagonizes silencing in Saccharomyces cerevisiae independently of the Rpd3S histone deacetylase complex. Genetics 175(2):585-93 PMID:17179083
Venkatasubrahmanyam S, et al. (2007) Genome-wide, as opposed to local, antisilencing is mediated redundantly by the euchromatic factors Set1 and H2A.Z. Proc Natl Acad Sci U S A 104(42):16609-14 PMID:17925448
Madhani HD (2006) Functional analysis of protein kinase networks in living cells: beyond "knock-outs" and "knock-downs". Methods 40(3):251-4 PMID:16884918
Schwartz MA and Madhani HD (2006) Control of MAPK signaling specificity by a conserved residue in the MEK-binding domain of the yeast scaffold protein Ste5. Curr Genet 49(6):351-63 PMID:16463042
Kung C, et al. (2005) Chemical genomic profiling to identify intracellular targets of a multiplex kinase inhibitor. Proc Natl Acad Sci U S A 102(10):3587-92 PMID:15738404
Bao MZ, et al. (2004) Pheromone-dependent destruction of the Tec1 transcription factor is required for MAP kinase signaling specificity in yeast. Cell 119(7):991-1000 PMID:15620357
Kobor MS, et al. (2004) A protein complex containing the conserved Swi2/Snf2-related ATPase Swr1p deposits histone variant H2A.Z into euchromatin. PLoS Biol 2(5):E131 PMID:15045029
Hwang WW, et al. (2003) A conserved RING finger protein required for histone H2B monoubiquitination and cell size control. Mol Cell 11(1):261-6 PMID:12535538
Madhani HD, et al. (1999) Effectors of a developmental mitogen-activated protein kinase cascade revealed by expression signatures of signaling mutants. Proc Natl Acad Sci U S A 96(22):12530-5 PMID:10535956
Madhani HD and Guthrie C (1994) Genetic interactions between the yeast RNA helicase homolog Prp16 and spliceosomal snRNAs identify candidate ligands for the Prp16 RNA-dependent ATPase. Genetics 137(3):677-87 PMID:8088513