Reference: Chen Z, et al. (2021) TORC1 Determines Fab1 Lipid Kinase Function at Signaling Endosomes and Vacuoles. Curr Biol 31(2):297-309.e8

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Abstract


Organelles of the endomembrane system maintain their identity and integrity during growth or stress conditions by homeostatic mechanisms that regulate membrane flux and biogenesis. At lysosomes and endosomes, the Fab1 lipid kinase complex and the nutrient-regulated target of rapamycin complex 1 (TORC1) control the integrity of the endolysosomal homeostasis and cellular metabolism. Both complexes are functionally connected as Fab1-dependent generation of PI(3,5)P2 supports TORC1 activity. Here, we identify Fab1 as a target of TORC1 on signaling endosomes, which are distinct from multivesicular bodies, and provide mechanistic insight into their crosstalk. Accordingly, TORC1 can phosphorylate Fab1 proximal to its PI3P-interacting FYVE domain, which causes Fab1 to shift to signaling endosomes, where it generates PI(3,5)P2. This, in turn, regulates (1) vacuole morphology, (2) recruitment of TORC1 and the TORC1-regulatory Rag GTPase-containing EGO complex to signaling endosomes, and (3) TORC1 activity. Thus, our study unravels a regulatory feedback loop between TORC1 and the Fab1 complex that controls signaling at endolysosomes.

Reference Type
Journal Article | Research Support, Non-U.S. Gov't
Authors
Chen Z, Malia PC, Hatakeyama R, Nicastro R, Hu Z, Péli-Gulli MP, Gao J, Nishimura T, Eskes E, Stefan CJ, ... Show all
Primary Lit For
EGO complex
Additional Lit For
fab1-3A | fab1-5A | fab1-6A | fab1-6D

Regulation Annotations 2 entries for 3 genes


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RegulatorTargetDirectionRegulation OfHappens DuringMethodEvidence
TORC1 serine/threonine-protein kinase complex, TOR1 variantFAB1protein activityhigh-throughputexperimental evidence
TORC1 serine/threonine-protein kinase complex, TOR1 variantSCH9protein activityhigh-throughputexperimental evidence
Showing 1 to 2 of 2 entries

Post-translational Modifications6 entries for 6 sites


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ProteinSiteModificationModifier
FAB1S125phosphorylated residueTORC1 serine/threonine-protein kinase complex, TOR1 variant
FAB1S155phosphorylated residueTORC1 serine/threonine-protein kinase complex, TOR1 variant
FAB1S204phosphorylated residueTORC1 serine/threonine-protein kinase complex, TOR1 variant
FAB1S208phosphorylated residueTORC1 serine/threonine-protein kinase complex, TOR1 variant
FAB1S210phosphorylated residueTORC1 serine/threonine-protein kinase complex, TOR1 variant
SCH9T723phosphorylated residueTORC1 serine/threonine-protein kinase complex, TOR1 variant
Showing 1 to 6 of 6 entries

Interaction Annotations


Genetic Interactions

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Interactor Interactor Allele Assay Annotation Action Phenotype SGA score P-value Source Reference

Physical Interactions 3 entries for 4 genes

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InteractorInteractorAssayAnnotationActionModification
FAB1TOR1Biochemical Activitymanually curatedHit-Baitphosphorylated residue

BiFC

KOG1FAB1PCAmanually curatedHit-BaitNo Modification
TOR1TCO89Biochemical Activitymanually curatedBait-Hitphosphorylated residue
Showing 1 to 3 of 3 entries