Reference: Davis-Kaplan SR, et al. (2006) PKR1 encodes an assembly factor for the yeast V-type ATPase. J Biol Chem 281(42):32025-35

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Abstract


Deletion of the yeast gene PKR1 (YMR123W) results in an inability to grow on iron-limited medium. Pkr1p is localized to the membrane of the endoplasmic reticulum. Cells lacking Pkr1p show reduced levels of the V-ATPase subunit Vph1p due to increased turnover of the protein in mutant cells. Reduced levels of the V-ATPase lead to defective copper loading of Fet3p, a component of the high affinity iron transport system. Levels of Vph1p in cells lacking Pkr1p are similar to cells unable to assemble a functional V-ATPase due to lack of a V0 subunit or an endoplasmic reticulum (ER) assembly factor. However, unlike yeast mutants lacking a V0 subunit or a V-ATPase assembly factor, low levels of Vph1p present in cells lacking Pkr1p are assembled into a V-ATPase complex, which exits the ER and is present on the vacuolar membrane. The V-ATPase assembled in the absence of Pkr1p is fully functional because the mutant cells are able to weakly acidify their vacuoles. Finally, overexpression of the V-ATPase assembly factor Vma21p suppresses the growth and acidification defects of pkr1Delta cells. Our data indicate that Pkr1p functions together with the other V-ATPase assembly factors in the ER to efficiently assemble the V-ATPase membrane sector.

Reference Type
Journal Article | Research Support, N.I.H., Extramural
Authors
Davis-Kaplan SR, Compton MA, Flannery AR, Ward DM, Kaplan J, Stevens TH, Graham LA
Primary Lit For
VPH1 | PKR1 | Vacuolar proton translocating ATPase complex, vacuole variant
Additional Lit For
VMA21

Gene Ontology Annotations 3 entries for 1 gene


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Gene/ComplexQualifierGene Ontology TermAnnotation ExtensionEvidenceSourceAssigned On
PKR1involved invacuolar proton-transporting V-type ATPase complex assemblyIMPSGD2013-08-07
PKR1located inendoplasmic reticulum membraneIDASGD2022-08-26
PKR1involved invacuolar proton-transporting V-type ATPase complex assemblyIGI with VMA1SGD2013-08-07
Showing 1 to 3 of 3 entries

Interaction Annotations


Genetic Interactions

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Interactor Interactor Allele Assay Annotation Action Phenotype SGA score P-value Source Reference

Physical Interactions 2 entries for 3 genes

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InteractorInteractorAssayAnnotationActionModification
VMA2VMA1Affinity Capture-Westernmanually curatedBait-HitNo Modification
VMA2VPH1Affinity Capture-Westernmanually curatedBait-HitNo Modification
Showing 1 to 2 of 2 entries