SNR18 Literature

Primary Literature 9 references

Download References (.nbib)

van Nues RW and Watkins NJ (2017) Unusual C΄/D΄ motifs enable box C/D snoRNPs to modify multiple sites in the same rRNA target region. Nucleic Acids Res 45(4):2016-2028 PMID:28204564
Rothé B, et al. (2014) Characterization of the interaction between protein Snu13p/15.5K and the Rsa1p/NUFIP factor and demonstration of its functional importance for snoRNP assembly. Nucleic Acids Res 42(3):2015-36 PMID:24234454
Piekna-Przybylska D, et al. (2007) New bioinformatic tools for analysis of nucleotide modifications in eukaryotic rRNA. RNA 13(3):305-12 PMID:17283215
Lafontaine DL and Tollervey D (2000) Synthesis and assembly of the box C+D small nucleolar RNPs. Mol Cell Biol 20(8):2650-9 PMID:10733567
Lafontaine DL and Tollervey D (1999) Nop58p is a common component of the box C+D snoRNPs that is required for snoRNA stability. RNA 5(3):455-67 PMID:10094313
Lowe TM and Eddy SR (1999) A computational screen for methylation guide snoRNAs in yeast. Science 283(5405):1168-71 PMID:10024243
Samarsky DA and Fournier MJ (1999) A comprehensive database for the small nucleolar RNAs from Saccharomyces cerevisiae. Nucleic Acids Res 27(1):161-4 PMID:9847166
Petfalski E, et al. (1998) Processing of the precursors to small nucleolar RNAs and rRNAs requires common components. Mol Cell Biol 18(3):1181-9 PMID:9488433
Kiss-László Z, et al. (1996) Site-specific ribose methylation of preribosomal RNA: a novel function for small nucleolar RNAs. Cell 85(7):1077-88 PMID:8674114

Related Literature

Additional Literature 22 references

Download References (.nbib)

Losh JS, et al. (2015) Interaction between the RNA-dependent ATPase and poly(A) polymerase subunits of the TRAMP complex is mediated by short peptides and important for snoRNA processing. Nucleic Acids Res 43(3):1848-58 PMID:25589546
- SGD Paper
- DOI full text
- PMC full text
- PubMed
Peres da Silva R, et al. (2015) Extracellular vesicle-mediated export of fungal RNA. Sci Rep 5:7763 PMID:25586039
- SGD Paper
- DOI full text
- PMC full text
- PubMed
Cruz JA and Westhof E (2011) Identification and annotation of noncoding RNAs in Saccharomycotina. C R Biol 334(8-9):671-8 PMID:21819949
- SGD Paper
- DOI full text
- PubMed
van Nues RW, et al. (2011) Box C/D snoRNP catalysed methylation is aided by additional pre-rRNA base-pairing. EMBO J 30(12):2420-30 PMID:21556049
- SGD Paper
- DOI full text
- PMC full text
- PubMed
Mitrovich QM, et al. (2010) Evolution of yeast noncoding RNAs reveals an alternative mechanism for widespread intron loss. Science 330(6005):838-41 PMID:21051641
- SGD Paper
- DOI full text
- PMC full text
- PubMed
Preti M, et al. (2010) The telomere-binding protein Tbf1 demarcates snoRNA gene promoters in Saccharomyces cerevisiae. Mol Cell 38(4):614-20 PMID:20513435
- SGD Paper
- DOI full text
- PubMed
Azzouz N, et al. (2009) The CCR4-NOT complex physically and functionally interacts with TRAMP and the nuclear exosome. PLoS One 4(8):e6760 PMID:19707589
- SGD Paper
- DOI full text
- PMC full text
- PubMed
Ozsolak F, et al. (2009) Direct RNA sequencing. Nature 461(7265):814-8 PMID:19776739
- SGD Paper
- DOI full text
- PubMed
Coughlin DJ, et al. (2008) Genome-wide search for yeast RNase P substrates reveals role in maturation of intron-encoded box C/D small nucleolar RNAs. Proc Natl Acad Sci U S A 105(34):12218-23 PMID:18713869
- SGD Paper
- DOI full text
- PMC full text
- PubMed
Grzechnik P and Kufel J (2008) Polyadenylation linked to transcription termination directs the processing of snoRNA precursors in yeast. Mol Cell 32(2):247-58 PMID:18951092
- SGD Paper
- DOI full text
- PMC full text
- PubMed
Hatin I, et al. (2007) Fine-tuning of translation termination efficiency in Saccharomyces cerevisiae involves two factors in close proximity to the exit tunnel of the ribosome. Genetics 177(3):1527-37 PMID:17483428
- SGD Paper
- DOI full text
- PMC full text
- PubMed
Vincenti S, et al. (2007) The position of yeast snoRNA-coding regions within host introns is essential for their biosynthesis and for efficient splicing of the host pre-mRNA. RNA 13(1):138-50 PMID:17135484
- SGD Paper
- DOI full text
- PMC full text
- PubMed
Guglielmi B and Werner M (2002) The yeast homolog of human PinX1 is involved in rRNA and small nucleolar RNA maturation, not in telomere elongation inhibition. J Biol Chem 277(38):35712-9 PMID:12107183
- SGD Paper
- DOI full text
- PubMed
Dunbar DA, et al. (2000) Fibrillarin-associated box C/D small nucleolar RNAs in Trypanosoma brucei. Sequence conservation and implications for 2'-O-ribose methylation of rRNA. J Biol Chem 275(19):14767-76 PMID:10747997
- SGD Paper
- DOI full text
- PubMed
Villa T, et al. (2000) Identification of a novel element required for processing of intron-encoded box C/D small nucleolar RNAs in Saccharomyces cerevisiae. Mol Cell Biol 20(4):1311-20 PMID:10648617
- SGD Paper
- DOI full text
- PMC full text
- PubMed
van Hoof A, et al. (2000) Yeast exosome mutants accumulate 3'-extended polyadenylated forms of U4 small nuclear RNA and small nucleolar RNAs. Mol Cell Biol 20(2):441-52 PMID:10611222
- SGD Paper
- DOI full text
- PMC full text
- PubMed
Allmang C, et al. (1999) Functions of the exosome in rRNA, snoRNA and snRNA synthesis. EMBO J 18(19):5399-410 PMID:10508172
- SGD Paper
- DOI full text
- PMC full text
- PubMed
Chanfreau G, et al. (1998) Yeast RNase III as a key processing enzyme in small nucleolar RNAs metabolism. J Mol Biol 284(4):975-88 PMID:9837720
- SGD Paper
- DOI full text
- PubMed
Villa T, et al. (1998) Processing of the intron-encoded U18 small nucleolar RNA in the yeast Saccharomyces cerevisiae relies on both exo- and endonucleolytic activities. Mol Cell Biol 18(6):3376-83 PMID:9584178
- SGD Paper
- DOI full text
- PMC full text
- PubMed
Wu P, et al. (1998) Nop5p is a small nucleolar ribonucleoprotein component required for pre-18 S rRNA processing in yeast. J Biol Chem 273(26):16453-63 PMID:9632712
- SGD Paper
- DOI full text
- PMC full text
- PubMed
Balakin AG, et al. (1996) The RNA world of the nucleolus: two major families of small RNAs defined by different box elements with related functions. Cell 86(5):823-34 PMID:8797828
- SGD Paper
- DOI full text
- PubMed
Riedel N, et al. (1986) Small nuclear RNAs from Saccharomyces cerevisiae: unexpected diversity in abundance, size, and molecular complexity. Proc Natl Acad Sci U S A 83(21):8097-101 PMID:3534883
- SGD Paper
- DOI full text
- PMC full text
- PubMed

Reviews 12 references

Download References (.nbib)

Sharma S and Entian KD (2022) Chemical Modifications of Ribosomal RNA. Methods Mol Biol 2533:149-166 PMID:35796987
Nizhnikov AA, et al. (2014) Modulation of efficiency of translation termination in Saccharomyces cerevisiae. Prion 8(3):247-60 PMID:25486049
Roy K and Chanfreau GF (2012) The Diverse Functions of Fungal RNase III Enzymes in RNA Metabolism. Enzymes 31:213-35 PMID:27166447
Reichow SL, et al. (2007) The structure and function of small nucleolar ribonucleoproteins. Nucleic Acids Res 35(5):1452-64 PMID:17284456
Hopper AK (2006) Cellular dynamics of small RNAs. Crit Rev Biochem Mol Biol 41(1):3-19 PMID:16455518
Hage AE and Tollervey D (2004) A surfeit of factors: why is ribosome assembly so much more complicated in eukaryotes than bacteria? RNA Biol 1(1):10-5 PMID:17194932
Fatica A and Tollervey D (2003) Insights into the structure and function of a guide RNP. Nat Struct Biol 10(4):237-9 PMID:12660717
Perumal K and Reddy R (2002) The 3' end formation in small RNAs. Gene Expr 10(1-2):59-78 PMID:11868988
Lafontaine DL and Tollervey D (2001) The function and synthesis of ribosomes. Nat Rev Mol Cell Biol 2(7):514-20 PMID:11433365
Filipowicz W, et al. (1999) Structure and biogenesis of small nucleolar RNAs acting as guides for ribosomal RNA modification. Acta Biochim Pol 46(2):377-89 PMID:10547039
- SGD Paper
- PubMed
Lafontaine DL and Tollervey D (1998) Birth of the snoRNPs: the evolution of the modification-guide snoRNAs. Trends Biochem Sci 23(10):383-8 PMID:9810226
Tollervey D and Kiss T (1997) Function and synthesis of small nucleolar RNAs. Curr Opin Cell Biol 9(3):337-42 PMID:9159079

Gene Ontology Literature 4 references

Download References (.nbib)

Costa AR, et al. (2019) Proteasome inhibition prevents cell death induced by the chemotherapeutic agent cisplatin downstream of DNA damage. DNA Repair (Amst) 73:28-33 PMID:30502926
Lafontaine DL and Tollervey D (2000) Synthesis and assembly of the box C+D small nucleolar RNPs. Mol Cell Biol 20(8):2650-9 PMID:10733567
Lafontaine DL and Tollervey D (1999) Nop58p is a common component of the box C+D snoRNPs that is required for snoRNA stability. RNA 5(3):455-67 PMID:10094313
Kiss-László Z, et al. (1996) Site-specific ribose methylation of preribosomal RNA: a novel function for small nucleolar RNAs. Cell 85(7):1077-88 PMID:8674114

Interaction Literature 2 references

Download References (.nbib)

Bhutada P, et al. (2022) Rbp95 binds to 25S rRNA helix H95 and cooperates with the Npa1 complex during early pre-60S particle maturation. Nucleic Acids Res 50(17):10053-10077 PMID:36018804
Delaveau T, et al. (2016) Tma108, a putative M1 aminopeptidase, is a specific nascent chain-associated protein in Saccharomyces cerevisiae. Nucleic Acids Res 44(18):8826-8841 PMID:27580715

SNR18 / YNCA0003W Literature

Primary Literature 9 references

Related Literature

Additional Literature 22 references

Reviews 12 references

Gene Ontology Literature 4 references

Interaction Literature 2 references

Regulation Literature 0 references

High-Throughput Literature 1 reference

Primary Literature Literature that either focuses on the gene or contains information about function, biological role, cellular location, phenotype, regulation, structure, or disease homologs in other species for the gene or gene product. 9 references

Related Literature Genes that share literature (indicated by the purple circles) with the specified gene (indicated by yellow circle).

Additional Literature Papers that show experimental evidence for the gene or describe homologs in other species, but for which the gene is not the paper’s principal focus. 22 references

Reviews 12 references

Gene Ontology Literature Paper(s) associated with one or more GO (Gene Ontology) terms in SGD for the specified gene. 4 references

Interaction Literature Paper(s) associated with evidence supporting a physical or genetic interaction between the specified gene and another gene in SGD. Currently, all interaction evidence is obtained from BioGRID. 2 references

Regulation Literature Paper(s) associated with one or more pieces of regulation evidence in SGD, as found on the Regulation page. 0 references

High-Throughput Literature Paper(s) associated with one or more pieces of high-throughput evidence in SGD. 1 reference

Primary Literature 9 references

Related Literature

Additional Literature 22 references

Gene Ontology Literature 4 references

Interaction Literature 2 references

Regulation Literature 0 references

High-Throughput Literature 1 reference