Literature Help
YNCG0046W Literature
All manually curated literature for the specified gene, organized by relevance to the gene and by
association with specific annotations to the gene in SGD. SGD gathers references via a PubMed search for
papers whose titles or abstracts contain “yeast” or “cerevisiae;” these papers are reviewed manually and
linked to relevant genes and literature topics by SGD curators.
- Unique References
- 27
- Aliases
-
tT(UGU)G2
,
tRNA-Thr
Primary Literature
Literature that either focuses on the gene or contains information about function, biological role,
cellular location, phenotype, regulation, structure, or disease homologs in other species for the gene
or gene product.
No primary literature curated.
Download References (.nbib)
- Bąkowska-Żywicka K, et al. (2016) tRNA-derived short RNAs bind to Saccharomyces cerevisiae ribosomes in a stress-dependent manner and inhibit protein synthesis in vitro. FEMS Yeast Res 16(6) PMID:27609601
- Kumar Y and Bhargava P (2013) A unique nucleosome arrangement, maintained actively by chromatin remodelers facilitates transcription of yeast tRNA genes. BMC Genomics 14:402 PMID:23767421
- Chan PP and Lowe TM (2009) GtRNAdb: a database of transfer RNA genes detected in genomic sequence. Nucleic Acids Res 37(Database issue):D93-7 PMID:18984615
- Hani J and Feldmann H (1998) tRNA genes and retroelements in the yeast genome. Nucleic Acids Res 26(3):689-96 PMID:9443958
- Lowe TM and Eddy SR (1997) tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence. Nucleic Acids Res 25(5):955-64 PMID:9023104
- Percudani R, et al. (1997) Transfer RNA gene redundancy and translational selection in Saccharomyces cerevisiae. J Mol Biol 268(2):322-30 PMID:9159473
Related Literature
Genes that share literature (indicated by the purple circles) with the specified gene (indicated by yellow circle).
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Additional Literature
Papers that show experimental evidence for the gene or describe homologs in other species, but
for which the gene is not the paper’s principal focus.
No additional literature curated.
Download References (.nbib)
- Strassler SE, et al. (2023) tRNA m1G9 modification depends on substrate-specific RNA conformational changes induced by the methyltransferase Trm10. J Biol Chem 299(12):105443 PMID:37949221
- Nagarajavel V, et al. (2013) Global 'bootprinting' reveals the elastic architecture of the yeast TFIIIB-TFIIIC transcription complex in vivo. Nucleic Acids Res 41(17):8135-43 PMID:23856458
- Yukawa Y, et al. (2011) A common sequence motif involved in selection of transcription start sites of Arabidopsis and budding yeast tRNA genes. Genomics 97(3):166-72 PMID:21147216
- Ouameur AA, et al. (2010) Probing tRNA interaction with biogenic polyamines. RNA 16(10):1968-79 PMID:20729276
- Thompson DM, et al. (2008) tRNA cleavage is a conserved response to oxidative stress in eukaryotes. RNA 14(10):2095-103 PMID:18719243
- Cieśla M, et al. (2007) Maf1 is involved in coupling carbon metabolism to RNA polymerase III transcription. Mol Cell Biol 27(21):7693-702 PMID:17785443
- Jakó E, et al. (2007) In silico detection of tRNA sequence features characteristic to aminoacyl-tRNA synthetase class membership. Nucleic Acids Res 35(16):5593-609 PMID:17704131
- Goodenbour JM and Pan T (2006) Diversity of tRNA genes in eukaryotes. Nucleic Acids Res 34(21):6137-46 PMID:17088292
- Marck C, et al. (2006) The RNA polymerase III-dependent family of genes in hemiascomycetes: comparative RNomics, decoding strategies, transcription and evolutionary implications. Nucleic Acids Res 34(6):1816-35 PMID:16600899
- Giuliodori S, et al. (2003) A composite upstream sequence motif potentiates tRNA gene transcription in yeast. J Mol Biol 333(1):1-20 PMID:14516739
- Nameki N (1995) Identity elements of tRNA(Thr) towards Saccharomyces cerevisiae threonyl-tRNA synthetase. Nucleic Acids Res 23(15):2831-6 PMID:7659504
Reviews
No reviews curated.
Gene Ontology Literature
Paper(s) associated with one or more GO (Gene Ontology) terms in SGD for the specified gene.
No gene ontology literature curated.
Download References (.nbib)
- Costa AR, et al. (2019) Proteasome inhibition prevents cell death induced by the chemotherapeutic agent cisplatin downstream of DNA damage. DNA Repair (Amst) 73:28-33 PMID:30502926
- Bąkowska-Żywicka K, et al. (2016) tRNA-derived short RNAs bind to Saccharomyces cerevisiae ribosomes in a stress-dependent manner and inhibit protein synthesis in vitro. FEMS Yeast Res 16(6) PMID:27609601
- Lowe TM and Eddy SR (1997) tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence. Nucleic Acids Res 25(5):955-64 PMID:9023104
Interaction Literature
Paper(s) associated with evidence supporting a physical or genetic interaction between the
specified gene and another gene in SGD. Currently, all interaction evidence is obtained from
BioGRID.
No interaction literature curated.
Regulation Literature
Paper(s) associated with one or more pieces of regulation evidence in SGD, as found on the
Regulation page.
No regulation literature curated.
High-Throughput Literature
Paper(s) associated with one or more pieces of high-throughput evidence in SGD.
No high-throughput literature curated.