SNR48 Literature

Primary Literature 7 references

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Ismail S, et al. (2022) Emergence of the primordial pre-60S from the 90S pre-ribosome. Cell Rep 39(1):110640 PMID:35385737
Hildreth AE, et al. (2020) The nucleosome DNA entry-exit site is important for transcription termination and prevention of pervasive transcription. Elife 9 PMID:32845241
van Nues RW and Watkins NJ (2017) Unusual C΄/D΄ motifs enable box C/D snoRNPs to modify multiple sites in the same rRNA target region. Nucleic Acids Res 45(4):2016-2028 PMID:28204564
Tomson BN, et al. (2013) Effects of the Paf1 complex and histone modifications on snoRNA 3'-end formation reveal broad and locus-specific regulation. Mol Cell Biol 33(1):170-82 PMID:23109428
Piekna-Przybylska D, et al. (2007) New bioinformatic tools for analysis of nucleotide modifications in eukaryotic rRNA. RNA 13(3):305-12 PMID:17283215
Lowe TM and Eddy SR (1999) A computational screen for methylation guide snoRNAs in yeast. Science 283(5405):1168-71 PMID:10024243
Samarsky DA and Fournier MJ (1999) A comprehensive database for the small nucleolar RNAs from Saccharomyces cerevisiae. Nucleic Acids Res 27(1):161-4 PMID:9847166

Related Literature

Additional Literature 15 references

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Lee KY, et al. (2020) A crucial RNA-binding lysine residue in the Nab3 RRM domain undergoes SET1 and SET3-responsive methylation. Nucleic Acids Res 48(6):2897-2911 PMID:31960028
Roy K, et al. (2016) Common genomic elements promote transcriptional and DNA replication roadblocks. Genome Res 26(10):1363-1375 PMID:27540088
Peres da Silva R, et al. (2015) Extracellular vesicle-mediated export of fungal RNA. Sci Rep 5:7763 PMID:25586039
Cruz JA and Westhof E (2011) Identification and annotation of noncoding RNAs in Saccharomycotina. C R Biol 334(8-9):671-8 PMID:21819949
van Nues RW, et al. (2011) Box C/D snoRNP catalysed methylation is aided by additional pre-rRNA base-pairing. EMBO J 30(12):2420-30 PMID:21556049
Mitrovich QM, et al. (2010) Evolution of yeast noncoding RNAs reveals an alternative mechanism for widespread intron loss. Science 330(6005):838-41 PMID:21051641
Preti M, et al. (2010) The telomere-binding protein Tbf1 demarcates snoRNA gene promoters in Saccharomyces cerevisiae. Mol Cell 38(4):614-20 PMID:20513435
Singh N, et al. (2009) The Ess1 prolyl isomerase is required for transcription termination of small noncoding RNAs via the Nrd1 pathway. Mol Cell 36(2):255-66 PMID:19854134
Gaudin C, et al. (2006) Structure of an AAGU tetraloop and its contribution to substrate selection by yeast RNase III. J Mol Biol 363(2):322-31 PMID:16979185
Ghazal G and Elela SA (2006) Characterization of the reactivity determinants of a novel hairpin substrate of yeast RNase III. J Mol Biol 363(2):332-44 PMID:16962133
Ghazal G, et al. (2005) Genome-wide prediction and analysis of yeast RNase III-dependent snoRNA processing signals. Mol Cell Biol 25(8):2981-94 PMID:15798187
Carroll KL, et al. (2004) Identification of cis elements directing termination of yeast nonpolyadenylated snoRNA transcripts. Mol Cell Biol 24(14):6241-52 PMID:15226427
Barneche F, et al. (2000) Fibrillarin genes encode both a conserved nucleolar protein and a novel small nucleolar RNA involved in ribosomal RNA methylation in Arabidopsis thaliana. J Biol Chem 275(35):27212-20 PMID:10829025
Dunbar DA, et al. (2000) Fibrillarin-associated box C/D small nucleolar RNAs in Trypanosoma brucei. Sequence conservation and implications for 2'-O-ribose methylation of rRNA. J Biol Chem 275(19):14767-76 PMID:10747997
Balakin AG, et al. (1996) The RNA world of the nucleolus: two major families of small RNAs defined by different box elements with related functions. Cell 86(5):823-34 PMID:8797828

Reviews 11 references

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Mitterer V and Pertschy B (2022) RNA folding and functions of RNA helicases in ribosome biogenesis. RNA Biol 19(1):781-810 PMID:35678541
Sharma S and Entian KD (2022) Chemical Modifications of Ribosomal RNA. Methods Mol Biol 2533:149-166 PMID:35796987
Reichow SL, et al. (2007) The structure and function of small nucleolar ribonucleoproteins. Nucleic Acids Res 35(5):1452-64 PMID:17284456
Hopper AK (2006) Cellular dynamics of small RNAs. Crit Rev Biochem Mol Biol 41(1):3-19 PMID:16455518
Hage AE and Tollervey D (2004) A surfeit of factors: why is ribosome assembly so much more complicated in eukaryotes than bacteria? RNA Biol 1(1):10-5 PMID:17194932
Fatica A and Tollervey D (2003) Insights into the structure and function of a guide RNP. Nat Struct Biol 10(4):237-9 PMID:12660717
Perumal K and Reddy R (2002) The 3' end formation in small RNAs. Gene Expr 10(1-2):59-78 PMID:11868988
Lafontaine DL and Tollervey D (2001) The function and synthesis of ribosomes. Nat Rev Mol Cell Biol 2(7):514-20 PMID:11433365
Filipowicz W, et al. (1999) Structure and biogenesis of small nucleolar RNAs acting as guides for ribosomal RNA modification. Acta Biochim Pol 46(2):377-89 PMID:10547039
- SGD Paper
- PubMed
Lafontaine DL and Tollervey D (1998) Birth of the snoRNPs: the evolution of the modification-guide snoRNAs. Trends Biochem Sci 23(10):383-8 PMID:9810226
Tollervey D and Kiss T (1997) Function and synthesis of small nucleolar RNAs. Curr Opin Cell Biol 9(3):337-42 PMID:9159079

Gene Ontology Literature 2 references

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Costa AR, et al. (2019) Proteasome inhibition prevents cell death induced by the chemotherapeutic agent cisplatin downstream of DNA damage. DNA Repair (Amst) 73:28-33 PMID:30502926
Lowe TM and Eddy SR (1999) A computational screen for methylation guide snoRNAs in yeast. Science 283(5405):1168-71 PMID:10024243

Interaction Literature 2 references

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Porter DF, et al. (2015) Target selection by natural and redesigned PUF proteins. Proc Natl Acad Sci U S A 112(52):15868-73 PMID:26668354
Creamer TJ, et al. (2011) Transcriptome-wide binding sites for components of the Saccharomyces cerevisiae non-poly(A) termination pathway: Nrd1, Nab3, and Sen1. PLoS Genet 7(10):e1002329 PMID:22028667

SNR48 / YNCG0026W Literature

Primary Literature 7 references

Related Literature

Additional Literature 15 references

Reviews 11 references

Gene Ontology Literature 2 references

Phenotype Literature 1 reference

Interaction Literature 2 references

Primary Literature Literature that either focuses on the gene or contains information about function, biological role, cellular location, phenotype, regulation, structure, or disease homologs in other species for the gene or gene product. 7 references

Related Literature Genes that share literature (indicated by the purple circles) with the specified gene (indicated by yellow circle).

Additional Literature Papers that show experimental evidence for the gene or describe homologs in other species, but for which the gene is not the paper’s principal focus. 15 references

Reviews 11 references

Gene Ontology Literature Paper(s) associated with one or more GO (Gene Ontology) terms in SGD for the specified gene. 2 references

Phenotype Literature Paper(s) associated with one or more pieces of classical phenotype evidence in SGD for the specified gene. 1 reference

Interaction Literature Paper(s) associated with evidence supporting a physical or genetic interaction between the specified gene and another gene in SGD. Currently, all interaction evidence is obtained from BioGRID. 2 references

Primary Literature 7 references

Related Literature

Additional Literature 15 references

Gene Ontology Literature 2 references

Phenotype Literature 1 reference

Interaction Literature 2 references