Phenotype Help

REC102 / YLR329W Phenotype

Phenotype annotations for a gene are curated single mutant phenotypes that require an observable (e.g., "cell shape"), a qualifier (e.g., "abnormal"), a mutant type (e.g., null), strain background, and a reference. In addition, annotations are classified as classical genetics or high-throughput (e.g., large scale survey, systematic mutation set). Whenever possible, allele information and additional details are provided.



Annotations

A phenotype is defined as an observable (e.g., apoptosis) and a qualifier (e.g., increased). There may be more than one row with the same phenotype if that phenotype was observed in separate studies or in different conditions, strains, alleles, etc.

12 entries for 10 phenotypes


Increase the total number of rows showing on this page using the pull-down located below the table, or use the page scroll at the table's top right to browse through the table's pages; use the arrows to the right of a column header to sort by that column; filter the table using the "Filter" box at the top of the table; click on the small "i" buttons located within a cell for an annotation to view further details.

PhenotypeExperiment TypeMutant InformationStrain BackgroundChemicalDetailsReference
competitive fitness: decreased
competitive growth

fitness profiling using complete deletion alleles

null
Allele: rec102-Δ
S288CMedia: minimal medium
Details: Relative fitness score: 0.836
Breslow DK, et al. (2008) PMID:18622397
competitive fitness: decreased
systematic mutation setnull
Allele: rec102-Δ
S288CMedia: synthetic oak exudate medium, OAK
Qian W, et al. (2012) PMID:23103169
protein/peptide accumulation: decreased
Reporter: Rec104p
homozygous diploidnull
Allele: rec102-Δ
SK1Details: 4 hours in meiosis
Kee K, et al. (2004) PMID:15044957
protein/peptide distribution: abnormal
Reporter: Rec104p
homozygous diploidnull
Allele: rec102-Δ
SK1Details: decreased localization to chromatin during meiosis
Kee K, et al. (2004) PMID:15044957
protein/peptide modification: decreased
Reporter: Rec104p
homozygous diploidnull
Allele: rec102-Δ
SK1Details: 3 hrs in meiosis
Kee K, et al. (2004) PMID:15044957
resistance to chemicals: decreased
systematic mutation setnull
Allele: rec102-Δ
S288C nickel sulfateArita A, et al. (2009) PMID:19917080
resistance to chemicals: decreased
systematic mutation setnull
Allele: rec102-Δ
S288C CG-1521Gaupel AC, et al. (2014) PMID:24968945
spore germination: decreased
classical geneticsreduction of functionOtherMalone RE, et al. (1991) PMID:2060778
sporulation: decreased
homozygous diploidreduction of functionOtherMalone RE, et al. (1991) PMID:2060778
UV resistance: increased
homozygous diploid, competitive growthnull
Allele: rec102-Δ
S288CRadiation: UV irradiation, 288 J/cm2
Brown JA, et al. (2006) PMID:16738548
Showing 1 to 10 of 12 entries

Shared Phenotypes

This diagram displays phenotype observables (purple squares) that are shared between the given gene (yellow circle) and other genes (gray circles) based on the number of phenotype observables shared (adjustable using the slider at the bottom).


Reset

Click on a gene or phenotype observable name to go to its specific page within SGD; drag any of the gene or observable objects around within the visualization for easier viewing; click “Reset” to automatically redraw the diagram; filter the genes that share observable terms with the given gene by the number of terms they share by clicking anywhere on the slider bar or dragging the tab to the desired filter number.


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