Interaction Help

HIF1 / YLL022C Interactions

Interaction annotations are curated by BioGRID and include physical or genetic interactions observed between at least two genes. An interaction annotation is composed of the interaction type, name of the interactor, assay type (e.g., Two-Hybrid), annotation type (e.g., manual or high-throughput), and a reference. Experimental details, phenotype, modification, and multiple mutant information are included when available.


Source: All physical and genetic interaction annotations listed in SGD are curated by BioGRID.

Genetic Interactions

An interaction is defined as an experimentally observed physical or genetic interaction between two genes. There may be more than one row listed for the same interactor if the interaction between it and the given gene was observed in separate studies. All interactions listed in SGD are curated by BioGRID.


Genetic Interactions

Increase the total number of rows showing on this page by using the pull-down located below the table, or use the page scroll at the table's top right to browse through the table's pages; use the arrows to the right of a column header to sort by that column; filter the table using the "Filter" box at the top of the table; click on the small "i" buttons located within a cell for an annotation to view further details about experiment type and any other genes involved in the interaction.

Interactor Interactor Allele Assay Annotation Action Phenotype SGA score P-value Source Reference

Physical Interactions

An interaction is defined as an experimentally observed physical or genetic interaction between two genes. There may be more than one row listed for the same interactor if the interaction between it and the given gene was observed in separate studies. All interactions listed in SGD are curated by BioGRID.


Physical Interactions 94 entries for 40 genes

Increase the total number of rows showing on this page by using the pull-down located below the table, or use the page scroll at the table's top right to browse through the table's pages; use the arrows to the right of a column header to sort by that column; filter the table using the "Filter" box at the top of the table; click on the small "i" buttons located within a cell for an annotation to view further details about experiment type and any other genes involved in the interaction.

InteractorAssayAnnotationActionModificationReference
ASF1Affinity Capture-Westernmanually curatedHitNo ModificationFillingham J, et al. (2008) PMID:18458063
ASF1Affinity Capture-MSmanually curatedHitNo ModificationCampos EI, et al. (2010) PMID:20953179
ASF1Affinity Capture-Westernmanually curatedHitNo ModificationDannah NS, et al. (2018) PMID:29661843
CDC48Affinity Capture-MShigh-throughputBaitNo ModificationKrogan NJ, et al. (2006) PMID:16554755

hit proteins identified by MudPIT analysis

CMR1Co-fractionationhigh-throughputHitNo ModificationGilmore JM, et al. (2012) PMID:22199229
CRN1Affinity Capture-MShigh-throughputBaitNo ModificationKrogan NJ, et al. (2006) PMID:16554755
CSE4Affinity Capture-MShigh-throughputHitNo ModificationRanjitkar P, et al. (2010) PMID:21070971
ESA1Biochemical Activitymanually curatedHitmonoacetylated residueLin YY, et al. (2009) PMID:19303850
GCN5Affinity Capture-MSmanually curatedHitNo ModificationVicente-Muñoz S, et al. (2014) PMID:25473596
HAT1Affinity Capture-MShigh-throughputHitNo ModificationGavin AC, et al. (2002) PMID:11805826
Showing 1 to 10 of 94 entries

Interaction Network

This diagram displays physical (purple lines) and genetic (green lines) interactions between the given gene (yellow circle) and its interactors (gray circles) based on the number of experiments supporting each interaction (adjustable using the slider at the bottom). Interactions between the interactors for a given gene are also shown.


Reset

Click on a gene to go to its specific page within SGD; drag any of the gene objects around within the visualization for easier viewing; filter by interaction type (genetic or physical) using the radio buttons; click “Reset” to automatically redraw the diagram; filter the number of interactors displayed by adjusting the number of experiments supporting a gene's interaction with the given gene by clicking anywhere on the slider bar or dragging the tab to the desired filter number.

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Resources


BioGRID | CYC2008 | DIP | GeneMANIA | IMP | InterologFinder | ModelArchive | TheCellMap

HTB1