YGL177W


Systematic Name
YGL177W
SGD ID
SGD:S000003145
Feature Type
ORF , Dubious
Description
Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data 1
Comparative Info

Homologs

Homology calls are sourced from the Alliance of Genome Resources. Many aspects of data integration presented at the Alliance require a common set of orthology relationships among genes for the organisms represented, including human. The Alliance provides the results of all methods that have been benchmarked by the Quest for Orthologs Consortium (QfO). The homolog inferences from the different methods have been integrated using the DRSC Integrative Ortholog Prediction Tool (DIOPT), which integrates a number of existing methods including those used by the Alliance: Ensembl Compara, HGNC, Hieranoid, InParanoid, OMA, OrthoFinder, OrthoInspector, PANTHER, PhylomeDB, Roundup, TreeFam, and ZFIN.


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Species Gene ID Gene name Source

Functional Complementation

Information about cross-species functional complementation between yeast and other species, curated by SGD and the Princeton Protein Orthology Database (P-POD).


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Gene Species Gene ID Strain background Direction Details Source Reference

Fungal Homologs

Fungal Homology calls are sourced from YeastMine, which compiles fungal homology calls from FungiDB, CGD, Panther, PomBase, TreeFam, HomoloGene, and SGD.


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Species Gene ID Gene name Description Source

External Identifiers

List of external identifiers for the protein from various database sources.


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External ID Source

Resources


Homologs

AGD | Fungal Orthogroups | FungiDB | PhylomeDB | YGOB | YOGY

Protein Databases

GPMDB | Pfam domains | SUPERFAMILY | TopologYeast

Localization

CYCLoPs | dHITS | LoQAtE | YeastGFP | YeastRGB | YPL+

Post-translational Modifications

PhosphoPep

S288C only

BLASTN | BLASTP | Design Primers | Restriction Fragment Map | Restriction Fragment Sizes | Six-Frame Translation

S288C vs. other species

BLASTN vs. fungi | BLASTP vs. fungi

S288C vs. other strains

Strain Alignment | Variant Viewer