Protein abundance data, domains, shared domains with other proteins, protein sequence retrieval for various strains, sequence-based physico-chemical properties, protein modification sites, and external identifiers for the protein.
Contains experimentally-derived protein half-life data obtained using stable isotope labeling by amino acids (SILAC) coupled with mass spectrometry. This section also contains protein abundance data for both untreated and treated cells obtained from over 20 studies. These data have been normalized and converted to a common unit of molecules per cell.
|Evidence ID||Analyze ID||Gene||Gene Systematic Name||Experiment||Result||Reference|
|Evidence ID||Analyze ID||Gene||Gene Systematic Name||Abundance (molecules/cell)||Media||Treatment||Treatment time||Fold Change||Visualization||Strain background||Original Reference||Reference|
Collection of computationally identified domains and motifs, as determined by InterProScan analysis; includes protein coordinates for the domain, a domain Description, a Source and corresponding accession ID, and the number of S. cerevisiae genes that share the same domain.
|Evidence ID||Analyze ID||Gene||Gene Systematic Name||Protein Coordinates||Accession ID||Description||Source||No. of Genes with Domain|
Visual representation of the locations of the domains within the protein, as listed in the Domains and Classification table. Each row displays the domain(s) derived from a different Source, with domains color-coded according to this Source.
Scroll over a domain to view its exact coordinates and its Description.
Curated mutant alleles for the specified gene, listed alphabetically. Click on the allele name to open the allele page. Click "SGD search" to view all alleles in search results. Click "YeastMine" to view all alleles in YeastMine.
Protein sequence for the given gene in S288C and other strains, when available. Use the pull-down menu under "Strain" to select the sequence for a specific strain. The displayed sequence can be downloaded in FASTA format as a .txt file. Amino acids displayed in blue represent modification sites. More detailed evidence for these modification sites is presented in the Post-translational Modifications table, located just below the protein sequence.
This locus is not translated into a protein.
* Blue amino acids indicate modification sites. More information below.
Modification sites for the protein in the selected strain, based on the presence of a residue in the specific strain, as inferred from experimental evidence.
Calculated protein properties, including amino acid composition, length, coding region calculations, and atomic composition.
Sort table using the arrow to the right of a column header to sort by that column; download all properties as a .txt file using the "Download Properties" button.
|Molecular Weight (Da):|
|Isoelectric Point (pl):|
|Codon Adaptation Index:|
|Frequence of Optimal Codons:|
|Hydropathicity of Protein:|
|ALL Cys residues appear as half cystines:|
|NO Cys residues appear as half cystines:|
Data not found or not available for
List of external identifiers for the protein from various database sources.
|Alias ID||External ID||Source|