Phenotype Help

BRL1 / YHR036W Phenotype

Phenotype annotations for a gene are curated single mutant phenotypes that require an observable (e.g., "cell shape"), a qualifier (e.g., "abnormal"), a mutant type (e.g., null), strain background, and a reference. In addition, annotations are classified as classical genetics or high-throughput (e.g., large scale survey, systematic mutation set). Whenever possible, allele information and additional details are provided.


Summary
Essential gene in reference strain S288C; conditional mutant is heat and cold sensitive, and slow growing at permissive temperature; repressible mutant has a G1 delay; conditional mutant is sensitive to sterol biosynthesis inhibitors and membrane fluidizing agents, accumulating ergosterol, sterol precursors and monounsaturated fatty acids at permissive temperatures; conditional mutant is defective in the nuclear export of poly(A)+ mRNA, and mislocalizes nuclear pore complex (NPC) cytoplasmic filament proteins; conditional mutant has a nuclear morphology defect with abnormal nuclear envelope, and an abnormal lipid particle arrangement with a circular pattern of droplets surrounding the nucleus; conditional mutant has a strong chromosomal instability phenotype; overexpression results in enhanced pseudohyphal and invasive growth

Annotations

A phenotype is defined as an observable (e.g., apoptosis) and a qualifier (e.g., increased). There may be more than one row with the same phenotype if that phenotype was observed in separate studies or in different conditions, strains, alleles, etc.

73 entries for 20 phenotypes


Increase the total number of rows showing on this page using the pull-down located below the table, or use the page scroll at the table's top right to browse through the table's pages; use the arrows to the right of a column header to sort by that column; filter the table using the "Filter" box at the top of the table; click on the small "i" buttons located within a cell for an annotation to view further details.

PhenotypeExperiment TypeMutant InformationStrain BackgroundChemicalDetailsReference
cell cycle progression in G1 phase: abnormal
large-scale surveyrepressibleS288CDetails: accumulation of cells with a 1C DNA content indicative of a G1 arrest or delay
Yu L, et al. (2006) PMID:16943325
chemical compound accumulation: increased
classical geneticsconditional
Allele: brl1-1
Other ergosterolTemperature: permissive temperature, 24 °C
Lone MA, et al. (2015) PMID:26432634
chemical compound accumulation: increased
classical geneticsconditional
Allele: brl1-1
Other oleic acidTemperature: reduced temperature, 16 °C
Details: similar results with brl1-2
Lone MA, et al. (2015) PMID:26432634
chemical compound accumulation: increased
classical geneticsconditional
Allele: brl1-1
Other sterol esterTemperature: permissive temperature, 24 °C
Details: similar results with brl1-2
Lone MA, et al. (2015) PMID:26432634
chemical compound accumulation: increased
classical geneticsconditional
Allele: brl1-1
Other lanosterolTemperature: permissive temperature, 24 °C
Details: similar results with brl1-2
Lone MA, et al. (2015) PMID:26432634
chemical compound accumulation: increased
classical geneticsconditional
Allele: brl1-1
Other episterolTemperature: permissive temperature, 24 °C
Details: similar results with brl1-2
Lone MA, et al. (2015) PMID:26432634
chemical compound accumulation: increased
classical geneticsconditional
Allele: brl1-1
Other palmitoleic acidTemperature: reduced temperature, 16 °C
Details: similar results with brl1-2
Lone MA, et al. (2015) PMID:26432634
chemical compound accumulation: increased
classical geneticsconditional
Allele: brl1-1
Other tetradecanoic acidTemperature: reduced temperature, 16 °C
Details: similar results with brl1-2
Lone MA, et al. (2015) PMID:26432634
chemical compound accumulation: increased
classical geneticsconditional
Allele: brl1-1
Other myristoleic acidTemperature: reduced temperature, 16 °C
Details: similar results with brl1-2
Lone MA, et al. (2015) PMID:26432634
chemical compound accumulation: increased
classical geneticsconditional
Allele: brl1-1
Other zymosterolTemperature: permissive temperature, 24 °C
Details: similar results with brl1-2
Lone MA, et al. (2015) PMID:26432634
Showing 1 to 10 of 73 entries

Shared Phenotypes

This diagram displays phenotype observables (purple squares) that are shared between the given gene (yellow circle) and other genes (gray circles) based on the number of phenotype observables shared (adjustable using the slider at the bottom).


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Click on a gene or phenotype observable name to go to its specific page within SGD; drag any of the gene or observable objects around within the visualization for easier viewing; click “Reset” to automatically redraw the diagram; filter the genes that share observable terms with the given gene by the number of terms they share by clicking anywhere on the slider bar or dragging the tab to the desired filter number.


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