Literature Help
FLR1 / YBR008C Literature
All manually curated literature for the specified gene, organized by relevance to the gene and by
association with specific annotations to the gene in SGD. SGD gathers references via a PubMed search for
papers whose titles or abstracts contain “yeast” or “cerevisiae;” these papers are reviewed manually and
linked to relevant genes and literature topics by SGD curators.
Primary Literature
Literature that either focuses on the gene or contains information about function, biological role,
cellular location, phenotype, regulation, structure, or disease homologs in other species for the gene
or gene product.
No primary literature curated.
Download References (.nbib)
- Choi JE, et al. (2022) Yap1-mediated Flr1 expression reveals crosstalk between oxidative stress signaling and caffeine resistance in Saccharomyces cerevisiae. Front Microbiol 13:1026780 PMID:36504777
- Ottilie S, et al. (2022) Adaptive laboratory evolution in S. cerevisiae highlights role of transcription factors in fungal xenobiotic resistance. Commun Biol 5(1):128 PMID:35149760
- Nicastro R, et al. (2021) Indole-3-acetic acid is a physiological inhibitor of TORC1 in yeast. PLoS Genet 17(3):e1009414 PMID:33690632
- van Dijk M, et al. (2021) RNA sequencing reveals metabolic and regulatory changes leading to more robust fermentation performance during short-term adaptation of Saccharomyces cerevisiae to lignocellulosic inhibitors. Biotechnol Biofuels 14(1):201 PMID:34654441
- Zhao B, et al. (2018) Discovery of Pyruvate Kinase as a Novel Target of New Fungicide Candidate 3-(4-Methyl-1,2,3-thiadiazolyl)-6-trichloromethyl-[1,2,4]-triazolo-[3,4- b][1,3,4]-thiadizole. J Agric Food Chem 66(46):12439-12452 PMID:30350975
- Yofe I, et al. (2016) One library to make them all: streamlining the creation of yeast libraries via a SWAp-Tag strategy. Nat Methods 13(4):371-378 PMID:26928762
- Dejos C, et al. (2013) The MFS-type efflux pump Flr1 induced by Yap1 promotes canthin-6-one resistance in yeast. FEBS Lett 587(18):3045-51 PMID:23912082
- Mira NP, et al. (2012) Characterization of complex regulatory networks and identification of promoter regulatory elements in yeast: "in silico" and "wet-lab" approaches. Methods Mol Biol 809:27-48 PMID:22113266
- Tkach JM, et al. (2012) Dissecting DNA damage response pathways by analysing protein localization and abundance changes during DNA replication stress. Nat Cell Biol 14(9):966-76 PMID:22842922
- Dias PJ, et al. (2010) Evolution of the 12-spanner drug:H+ antiporter DHA1 family in hemiascomycetous yeasts. OMICS 14(6):701-10 PMID:21114408
- Sundström L, et al. (2010) Identification of Saccharomyces cerevisiae genes involved in the resistance to phenolic fermentation inhibitors. Appl Biochem Biotechnol 161(1-8):106-15 PMID:19847383
- Teixeira MC, et al. (2010) Refining current knowledge on the yeast FLR1 regulatory network by combined experimental and computational approaches. Mol Biosyst 6(12):2471-81 PMID:20938527
- Verwaal R, et al. (2010) Heterologous carotenoid production in Saccharomyces cerevisiae induces the pleiotropic drug resistance stress response. Yeast 27(12):983-98 PMID:20632327
- Lelandais G, et al. (2008) Genome adaptation to chemical stress: clues from comparative transcriptomics in Saccharomyces cerevisiae and Candida glabrata. Genome Biol 9(11):R164 PMID:19025642
- Teixeira MC, et al. (2008) Yeast adaptation to mancozeb involves the up-regulation of FLR1 under the coordinate control of Yap1, Rpn4, Pdr3, and Yrr1. Biochem Biophys Res Commun 367(2):249-55 PMID:18086556
- Iwahashi Y, et al. (2006) Mechanisms of patulin toxicity under conditions that inhibit yeast growth. J Agric Food Chem 54(5):1936-42 PMID:16506856
- Kim JH, et al. (2006) Gene targets for fungal and mycotoxin control. Mycotoxin Res 22(1):3-8 PMID:23605494
- Li XC, et al. (2006) Capisterones A and B, which enhance fluconazole activity in Saccharomyces cerevisiae, from the marine green alga Penicillus capitatus. J Nat Prod 69(4):542-6 PMID:16643022
- Romero C, et al. (2006) Expression of FLR1 transporter requires phospholipase C and is repressed by Mediator. J Biol Chem 281(9):5677-85 PMID:16352614
- Srikanth CV, et al. (2005) Acetaminophen toxicity and resistance in the yeast Saccharomyces cerevisiae. Microbiology (Reading) 151(Pt 1):99-111 PMID:15632430
- Nguyên DT, et al. (2001) Multiple Yap1p-binding sites mediate induction of the yeast major facilitator FLR1 gene in response to drugs, oxidants, and alkylating agents. J Biol Chem 276(2):1138-45 PMID:11056165
- Tenreiro S, et al. (2001) Transcriptional activation of FLR1 gene during Saccharomyces cerevisiae adaptation to growth with benomyl: role of Yap1p and Pdr3p. Biochem Biophys Res Commun 280(1):216-22 PMID:11162502
- Jungwirth H, et al. (2000) Diazaborine resistance in yeast involves the efflux pumps Ycf1p and Flr1p and is enhanced by a gain-of-function allele of gene YAP1. Eur J Biochem 267(15):4809-16 PMID:10903515
- Brôco N, et al. (1999) FLR1 gene (ORF YBR008c) is required for benomyl and methotrexate resistance in Saccharomyces cerevisiae and its benomyl-induced expression is dependent on pdr3 transcriptional regulator. Yeast 15(15):1595-608 PMID:10572257
- Oskouian B and Saba JD (1999) YAP1 confers resistance to the fatty acid synthase inhibitor cerulenin through the transporter Flr1p in Saccharomyces cerevisiae. Mol Gen Genet 261(2):346-53 PMID:10102370
- Alarco AM, et al. (1997) AP1-mediated multidrug resistance in Saccharomyces cerevisiae requires FLR1 encoding a transporter of the major facilitator superfamily. J Biol Chem 272(31):19304-13 PMID:9235926
- Goffeau A, et al. (1997) Multidrug-resistant transport proteins in yeast: complete inventory and phylogenetic characterization of yeast open reading frames with the major facilitator superfamily. Yeast 13(1):43-54 PMID:9046086
Related Literature
Genes that share literature (indicated by the purple circles) with the specified gene (indicated by yellow circle).
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Additional Literature
Papers that show experimental evidence for the gene or describe homologs in other species, but
for which the gene is not the paper’s principal focus.
No additional literature curated.
Download References (.nbib)
- Holyavkin C, et al. (2023) Genomic, transcriptomic, and metabolic characterization of 2-Phenylethanol-resistant Saccharomyces cerevisiae obtained by evolutionary engineering. Front Microbiol 14:1148065 PMID:37113225
- Lanz MC, et al. (2021) In-depth and 3-dimensional exploration of the budding yeast phosphoproteome. EMBO Rep 22(2):e51121 PMID:33491328
- Feldman D, et al. (2019) Identification and manipulation of Neurospora crassa genes involved in sensitivity to furfural. Biotechnol Biofuels 12:210 PMID:31508149
- Van Dalfsen KM, et al. (2018) Global Proteome Remodeling during ER Stress Involves Hac1-Driven Expression of Long Undecoded Transcript Isoforms. Dev Cell 46(2):219-235.e8 PMID:30016623
- Naranjo S, et al. (2015) Dissecting the Genetic Basis of a Complex cis-Regulatory Adaptation. PLoS Genet 11(12):e1005751 PMID:26713447
- Dias PJ and Sá-Correia I (2014) Phylogenetic and syntenic analyses of the 12-spanner drug:H(+) antiporter family 1 (DHA1) in pathogenic Candida species: evolution of MDR1 and FLU1 genes. Genomics 104(1):45-57 PMID:24907457
- Barghash A and Helms V (2013) Transferring functional annotations of membrane transporters on the basis of sequence similarity and sequence motifs. BMC Bioinformatics 14:343 PMID:24283849
- Kodo N, et al. (2013) Salicylic acid resistance is conferred by a novel YRR1 mutation in Saccharomyces cerevisiae. Biochem Biophys Res Commun 434(1):42-7 PMID:23545261
- Galdieri L, et al. (2012) Facilitated assembly of the preinitiation complex by separated tail and head/middle modules of the mediator. J Mol Biol 415(3):464-74 PMID:22137896
- Suzuki T and Iwahashi Y (2012) Comprehensive gene expression analysis of type B trichothecenes. J Agric Food Chem 60(37):9519-27 PMID:22897823
- Teixeira MC, et al. (2012) Increased expression of the yeast multidrug resistance ABC transporter Pdr18 leads to increased ethanol tolerance and ethanol production in high gravity alcoholic fermentation. Microb Cell Fact 11:98 PMID:22839110
- Venturi V, et al. (2012) The protein synthesis inhibitors mycalamides A and E have limited susceptibility toward the drug efflux network. J Biochem Mol Toxicol 26(3):94-100 PMID:22162108
- Vizoso-Vázquez A, et al. (2012) Ixr1p and the control of the Saccharomyces cerevisiae hypoxic response. Appl Microbiol Biotechnol 94(1):173-84 PMID:22189861
- Westman JO, et al. (2012) Encapsulation-induced stress helps Saccharomyces cerevisiae resist convertible Lignocellulose derived inhibitors. Int J Mol Sci 13(9):11881-11894 PMID:23109889
- Calçada D, et al. (2011) Quantitative modeling of the Saccharomyces cerevisiae FLR1 regulatory network using an S-system formalism. J Bioinform Comput Biol 9(5):613-30 PMID:21976379
- Jossé L, et al. (2011) Transcriptomic and phenotypic analysis of the effects of T-2 toxin on Saccharomyces cerevisiae: evidence of mitochondrial involvement. FEMS Yeast Res 11(1):133-50 PMID:21114626
- Monteiro PT, et al. (2011) Qualitative modelling and formal verification of the FLR1 gene mancozeb response in Saccharomyces cerevisiae. IET Syst Biol 5(5):308-16 PMID:22010757
- Dias PJ, et al. (2010) Insights into the mechanisms of toxicity and tolerance to the agricultural fungicide mancozeb in yeast, as suggested by a chemogenomic approach. OMICS 14(2):211-27 PMID:20337531
- García-López MC, et al. (2010) Overexpression of SNG1 causes 6-azauracil resistance in Saccharomyces cerevisiae. Curr Genet 56(3):251-63 PMID:20424846
- Yu L, et al. (2010) Allicin-induced global gene expression profile of Saccharomyces cerevisiae. Appl Microbiol Biotechnol 88(1):219-29 PMID:20617313
- Gordon JL, et al. (2009) Additions, losses, and rearrangements on the evolutionary route from a reconstructed ancestor to the modern Saccharomyces cerevisiae genome. PLoS Genet 5(5):e1000485 PMID:19436716
- Roberts GG and Hudson AP (2009) Rsf1p is required for an efficient metabolic shift from fermentative to glycerol-based respiratory growth in S. cerevisiae. Yeast 26(2):95-110 PMID:19235764
- Salin H, et al. (2008) Structure and properties of transcriptional networks driving selenite stress response in yeasts. BMC Genomics 9:333 PMID:18627600
- Trott A, et al. (2008) Activation of heat shock and antioxidant responses by the natural product celastrol: transcriptional signatures of a thiol-targeted molecule. Mol Biol Cell 19(3):1104-12 PMID:18199679
- Chen KH, et al. (2007) The bZip transcription factor Cgap1p is involved in multidrug resistance and required for activation of multidrug transporter gene CgFLR1 in Candida glabrata. Gene 386(1-2):63-72 PMID:17046176
- Godard P, et al. (2007) Effect of 21 different nitrogen sources on global gene expression in the yeast Saccharomyces cerevisiae. Mol Cell Biol 27(8):3065-86 PMID:17308034
- Iwahashi H, et al. (2007) Evaluation of toxicity of the mycotoxin citrinin using yeast ORF DNA microarray and Oligo DNA microarray. BMC Genomics 8:95 PMID:17408496
- Jacobs JL, et al. (2007) Identification of functional, endogenous programmed -1 ribosomal frameshift signals in the genome of Saccharomyces cerevisiae. Nucleic Acids Res 35(1):165-74 PMID:17158156
- De Hertogh B, et al. (2006) Emergence of species-specific transporters during evolution of the hemiascomycete phylum. Genetics 172(2):771-81 PMID:16118182
- Seol JH, et al. (2006) Different roles of histone H3 lysine 4 methylation in chromatin maintenance. Biochem Biophys Res Commun 349(2):463-70 PMID:16959218
- Lucau-Danila A, et al. (2005) Early expression of yeast genes affected by chemical stress. Mol Cell Biol 25(5):1860-8 PMID:15713640
- Haugen AC, et al. (2004) Integrating phenotypic and expression profiles to map arsenic-response networks. Genome Biol 5(12):R95 PMID:15575969
- Wehrschütz-Sigl E, et al. (2004) The transporters Pdr5p and Snq2p mediate diazaborine resistance and are under the control of the gain-of-function allele PDR1-12. Eur J Biochem 271(6):1145-52 PMID:15009193
- Lucau-Danila A, et al. (2003) Competitive promoter occupancy by two yeast paralogous transcription factors controlling the multidrug resistance phenomenon. J Biol Chem 278(52):52641-50 PMID:14512416
- Hoenicka J, et al. (2002) The SCR1 gene from Schwanniomyces occidentalis encodes a highly hydrophobic polypeptide, which confers ribosomal resistance to cycloheximide. Yeast 19(9):735-43 PMID:12112229
- Le Crom S, et al. (2002) New insights into the pleiotropic drug resistance network from genome-wide characterization of the YRR1 transcription factor regulation system. Mol Cell Biol 22(8):2642-9 PMID:11909958
- Teng SC, et al. (2002) Induction of global stress response in Saccharomyces cerevisiae cells lacking telomerase. Biochem Biophys Res Commun 291(3):714-21 PMID:11855849
- Alarco AM and Raymond M (1999) The bZip transcription factor Cap1p is involved in multidrug resistance and oxidative stress response in Candida albicans. J Bacteriol 181(3):700-8 PMID:9922230
- Jelinsky SA and Samson LD (1999) Global response of Saccharomyces cerevisiae to an alkylating agent. Proc Natl Acad Sci U S A 96(4):1486-91 PMID:9990050
- Rieger KJ, et al. (1999) Chemotyping of yeast mutants using robotics. Yeast 15(10B):973-86 PMID:10407277
Reviews
No reviews curated.
Download References (.nbib)
- Zbieralski K, et al. (2024) Multilevel Regulation of Membrane Proteins in Response to Metal and Metalloid Stress: A Lesson from Yeast. Int J Mol Sci 25(8) PMID:38674035
- Topaloğlu A, et al. (2023) From Saccharomyces cerevisiae to Ethanol: Unlocking the Power of Evolutionary Engineering in Metabolic Engineering Applications. J Fungi (Basel) 9(10) PMID:37888240
- Banerjee A, et al. (2022) How fungal multidrug transporters mediate hyper resistance through DNA amplification and mutation. Mol Microbiol 118(1-2):3-15 PMID:35611562
- Cámara E, et al. (2022) Data mining of Saccharomyces cerevisiae mutants engineered for increased tolerance towards inhibitors in lignocellulosic hydrolysates. Biotechnol Adv 57:107947 PMID:35314324
- Menegon YA, et al. (2022) How adaptive laboratory evolution can boost yeast tolerance to lignocellulosic hydrolyses. Curr Genet 68(3-4):319-342 PMID:35362784
- Carregosa D, et al. (2021) Overview of Beneficial Effects of (Poly)phenol Metabolites in the Context of Neurodegenerative Diseases on Model Organisms. Nutrients 13(9) PMID:34578818
- Knorre DA, et al. (2020) Do Multiple Drug Resistance Transporters Interfere with Cell Functioning under Normal Conditions? Biochemistry (Mosc) 85(12):1560-1569 PMID:33705294
- Cunha JT, et al. (2019) Molecular and physiological basis of Saccharomyces cerevisiae tolerance to adverse lignocellulose-based process conditions. Appl Microbiol Biotechnol 103(1):159-175 PMID:30397768
- Simaan H, et al. (2019) Oxidant-Sensing Pathways in the Responses of Fungal Pathogens to Chemical Stress Signals. Front Microbiol 10:567 PMID:30941117
- Caspeta L, et al. (2015) Modifying Yeast Tolerance to Inhibitory Conditions of Ethanol Production Processes. Front Bioeng Biotechnol 3:184 PMID:26618154
- Dos Santos SC, et al. (2014) MFS transporters required for multidrug/multixenobiotic (MD/MX) resistance in the model yeast: understanding their physiological function through post-genomic approaches. Front Physiol 5:180 PMID:24847282
- Dos Santos SC, et al. (2012) Yeast toxicogenomics: genome-wide responses to chemical stresses with impact in environmental health, pharmacology, and biotechnology. Front Genet 3:63 PMID:22529852
- Laluce C, et al. (2012) Advances and developments in strategies to improve strains of Saccharomyces cerevisiae and processes to obtain the lignocellulosic ethanol--a review. Appl Biochem Biotechnol 166(8):1908-26 PMID:22391693
- Lushchak VI (2011) Adaptive response to oxidative stress: Bacteria, fungi, plants and animals. Comp Biochem Physiol C Toxicol Pharmacol 153(2):175-90 PMID:20959147
- Lushchak VI (2010) Oxidative stress in yeast. Biochemistry (Mosc) 75(3):281-96 PMID:20370606
- Sá-Correia I, et al. (2009) Drug:H+ antiporters in chemical stress response in yeast. Trends Microbiol 17(1):22-31 PMID:19062291
- Panwar SL, et al. (2008) Membrane homoeostasis and multidrug resistance in yeast. Biosci Rep 28(4):217-28 PMID:18754755
- Gbelska Y, et al. (2006) Evolution of gene families: the multidrug resistance transporter genes in five related yeast species. FEMS Yeast Res 6(3):345-55 PMID:16630275
- Sá-Correia I and Tenreiro S (2002) The multidrug resistance transporters of the major facilitator superfamily, 6 years after disclosure of Saccharomyces cerevisiae genome sequence. J Biotechnol 98(2-3):215-26 PMID:12141988
Gene Ontology Literature
Paper(s) associated with one or more GO (Gene Ontology) terms in SGD for the specified gene.
No gene ontology literature curated.
Download References (.nbib)
- Yofe I, et al. (2016) One library to make them all: streamlining the creation of yeast libraries via a SWAp-Tag strategy. Nat Methods 13(4):371-378 PMID:26928762
- Tkach JM, et al. (2012) Dissecting DNA damage response pathways by analysing protein localization and abundance changes during DNA replication stress. Nat Cell Biol 14(9):966-76 PMID:22842922
- Jungwirth H, et al. (2000) Diazaborine resistance in yeast involves the efflux pumps Ycf1p and Flr1p and is enhanced by a gain-of-function allele of gene YAP1. Eur J Biochem 267(15):4809-16 PMID:10903515
- Brôco N, et al. (1999) FLR1 gene (ORF YBR008c) is required for benomyl and methotrexate resistance in Saccharomyces cerevisiae and its benomyl-induced expression is dependent on pdr3 transcriptional regulator. Yeast 15(15):1595-608 PMID:10572257
- Alarco AM, et al. (1997) AP1-mediated multidrug resistance in Saccharomyces cerevisiae requires FLR1 encoding a transporter of the major facilitator superfamily. J Biol Chem 272(31):19304-13 PMID:9235926
Phenotype Literature
Paper(s) associated with one or more pieces of classical phenotype evidence in SGD for the specified gene.
No phenotype literature curated.
Download References (.nbib)
- Nicastro R, et al. (2021) Indole-3-acetic acid is a physiological inhibitor of TORC1 in yeast. PLoS Genet 17(3):e1009414 PMID:33690632
- Zhao B, et al. (2018) Discovery of Pyruvate Kinase as a Novel Target of New Fungicide Candidate 3-(4-Methyl-1,2,3-thiadiazolyl)-6-trichloromethyl-[1,2,4]-triazolo-[3,4- b][1,3,4]-thiadizole. J Agric Food Chem 66(46):12439-12452 PMID:30350975
- Dejos C, et al. (2013) The MFS-type efflux pump Flr1 induced by Yap1 promotes canthin-6-one resistance in yeast. FEBS Lett 587(18):3045-51 PMID:23912082
- Sundström L, et al. (2010) Identification of Saccharomyces cerevisiae genes involved in the resistance to phenolic fermentation inhibitors. Appl Biochem Biotechnol 161(1-8):106-15 PMID:19847383
- Teixeira MC, et al. (2008) Yeast adaptation to mancozeb involves the up-regulation of FLR1 under the coordinate control of Yap1, Rpn4, Pdr3, and Yrr1. Biochem Biophys Res Commun 367(2):249-55 PMID:18086556
- Jungwirth H, et al. (2000) Diazaborine resistance in yeast involves the efflux pumps Ycf1p and Flr1p and is enhanced by a gain-of-function allele of gene YAP1. Eur J Biochem 267(15):4809-16 PMID:10903515
- Brôco N, et al. (1999) FLR1 gene (ORF YBR008c) is required for benomyl and methotrexate resistance in Saccharomyces cerevisiae and its benomyl-induced expression is dependent on pdr3 transcriptional regulator. Yeast 15(15):1595-608 PMID:10572257
Interaction Literature
Paper(s) associated with evidence supporting a physical or genetic interaction between the
specified gene and another gene in SGD. Currently, all interaction evidence is obtained from
BioGRID.
No interaction literature curated.
Download References (.nbib)
- Yap WS, et al. (2020) The yeast FIT2 homologs are necessary to maintain cellular proteostasis and membrane lipid homeostasis. J Cell Sci 133(21) PMID:33033181
- Miller JE, et al. (2018) Genome-Wide Mapping of Decay Factor-mRNA Interactions in Yeast Identifies Nutrient-Responsive Transcripts as Targets of the Deadenylase Ccr4. G3 (Bethesda) 8(1):315-330 PMID:29158339
- Jungfleisch J, et al. (2017) A novel translational control mechanism involving RNA structures within coding sequences. Genome Res 27(1):95-106 PMID:27821408
- Babour A, et al. (2016) The Chromatin Remodeler ISW1 Is a Quality Control Factor that Surveys Nuclear mRNP Biogenesis. Cell 167(5):1201-1214.e15 PMID:27863241
- Costanzo M, et al. (2016) A global genetic interaction network maps a wiring diagram of cellular function. Science 353(6306) PMID:27708008
- Sharifpoor S, et al. (2012) Functional wiring of the yeast kinome revealed by global analysis of genetic network motifs. Genome Res 22(4):791-801 PMID:22282571
- Costanzo M, et al. (2010) The genetic landscape of a cell. Science 327(5964):425-31 PMID:20093466
- Johansson MJ, et al. (2007) Association of yeast Upf1p with direct substrates of the NMD pathway. Proc Natl Acad Sci U S A 104(52):20872-7 PMID:18087042
- Alarco AM, et al. (1997) AP1-mediated multidrug resistance in Saccharomyces cerevisiae requires FLR1 encoding a transporter of the major facilitator superfamily. J Biol Chem 272(31):19304-13 PMID:9235926
Regulation Literature
Paper(s) associated with one or more pieces of regulation evidence in SGD, as found on the
Regulation page.
No regulation literature curated.
Download References (.nbib)
- Ottilie S, et al. (2022) Adaptive laboratory evolution in S. cerevisiae highlights role of transcription factors in fungal xenobiotic resistance. Commun Biol 5(1):128 PMID:35149760
- Kodo N, et al. (2013) Salicylic acid resistance is conferred by a novel YRR1 mutation in Saccharomyces cerevisiae. Biochem Biophys Res Commun 434(1):42-7 PMID:23545261
- Le Crom S, et al. (2002) New insights into the pleiotropic drug resistance network from genome-wide characterization of the YRR1 transcription factor regulation system. Mol Cell Biol 22(8):2642-9 PMID:11909958
- Nguyên DT, et al. (2001) Multiple Yap1p-binding sites mediate induction of the yeast major facilitator FLR1 gene in response to drugs, oxidants, and alkylating agents. J Biol Chem 276(2):1138-45 PMID:11056165
Post-translational Modifications Literature
Paper(s) associated with one or more pieces of post-translational modifications evidence in SGD.
No post-translational modifications literature curated.
High-Throughput Literature
Paper(s) associated with one or more pieces of high-throughput evidence in SGD.
No high-throughput literature curated.
Download References (.nbib)
- Wilcox A, et al. (2020) Sulforaphane alters the acidification of the yeast vacuole. Microb Cell 7(5):129-138 PMID:32391394
- Mondeel TDGA, et al. (2019) ChIP-exo analysis highlights Fkh1 and Fkh2 transcription factors as hubs that integrate multi-scale networks in budding yeast. Nucleic Acids Res 47(15):7825-7841 PMID:31299083
- Ostrow AZ, et al. (2014) Fkh1 and Fkh2 bind multiple chromosomal elements in the S. cerevisiae genome with distinct specificities and cell cycle dynamics. PLoS One 9(2):e87647 PMID:24504085
- O'Connor ST, et al. (2012) Genome-Wide Functional and Stress Response Profiling Reveals Toxic Mechanism and Genes Required for Tolerance to Benzo[a]pyrene in S. cerevisiae. Front Genet 3:316 PMID:23403841
- Pimentel C, et al. (2012) The role of the Yap5 transcription factor in remodeling gene expression in response to Fe bioavailability. PLoS One 7(5):e37434 PMID:22616008
- Pir P, et al. (2012) The genetic control of growth rate: a systems biology study in yeast. BMC Syst Biol 6:4 PMID:22244311
- Venters BJ, et al. (2011) A comprehensive genomic binding map of gene and chromatin regulatory proteins in Saccharomyces. Mol Cell 41(4):480-92 PMID:21329885
- Yoshikawa K, et al. (2011) Comprehensive phenotypic analysis of single-gene deletion and overexpression strains of Saccharomyces cerevisiae. Yeast 28(5):349-61 PMID:21341307
- Breslow DK, et al. (2008) A comprehensive strategy enabling high-resolution functional analysis of the yeast genome. Nat Methods 5(8):711-8 PMID:18622397
- Cipollina C, et al. (2008) Saccharomyces cerevisiae SFP1: at the crossroads of central metabolism and ribosome biogenesis. Microbiology (Reading) 154(Pt 6):1686-1699 PMID:18524923
- Brown JA, et al. (2006) Global analysis of gene function in yeast by quantitative phenotypic profiling. Mol Syst Biol 2:2006.0001 PMID:16738548
- Kim JH, et al. (2006) Gene targets for fungal and mycotoxin control. Mycotoxin Res 22(1):3-8 PMID:23605494
- MacIsaac KD, et al. (2006) An improved map of conserved regulatory sites for Saccharomyces cerevisiae. BMC Bioinformatics 7:113 PMID:16522208
- Giaever G, et al. (2002) Functional profiling of the Saccharomyces cerevisiae genome. Nature 418(6896):387-91 PMID:12140549