Berg MD, et al. (2022) Genetic background and mistranslation frequency determine the impact of mistranslating tRNASerUGG. G3 (Bethesda) 12(7) PMID:35587152
Searle BC, et al. (2018) Chromatogram libraries improve peptide detection and quantification by data independent acquisition mass spectrometry. Nat Commun 9(1):5128 PMID:30510204
Martin-Perez M and Villén J (2015) Feasibility of protein turnover studies in prototroph Saccharomyces cerevisiae strains. Anal Chem 87(7):4008-14 PMID:25767917
Swaney DL, et al. (2015) Phosphorylation of ubiquitin at Ser65 affects its polymerization, targets, and proteome-wide turnover. EMBO Rep 16(9):1131-44 PMID:26142280
Swaney DL, et al. (2013) Global analysis of phosphorylation and ubiquitylation cross-talk in protein degradation. Nat Methods 10(7):676-82 PMID:23749301
Holt LJ, et al. (2009) Global analysis of Cdk1 substrate phosphorylation sites provides insights into evolution. Science 325(5948):1682-6 PMID:19779198
Egelhofer TA, et al. (2008) The septins function in G1 pathways that influence the pattern of cell growth in budding yeast. PLoS One 3(4):e2022 PMID:18431499
Monahan BJ, et al. (2008) Fission yeast SWI/SNF and RSC complexes show compositional and functional differences from budding yeast. Nat Struct Mol Biol 15(8):873-80 PMID:18622392
Villén J, et al. (2008) Evaluation of the utility of neutral-loss-dependent MS3 strategies in large-scale phosphorylation analysis. Proteomics 8(21):4444-52 PMID:18972524
Huang J, et al. (2006) Inhibition of homologous recombination by a cohesin-associated clamp complex recruited to the rDNA recombination enhancer. Genes Dev 20(20):2887-901 PMID:17043313