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  • Author: Siggia ED
  • References

Author: Siggia ED


References 20 references


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  • Charvin G, et al. (2011) Correction: origin of irreversibility of cell cycle start in budding yeast.LID - 10.1371/annotation/90916531-1b34-4eb5-92a9-a7f8c5d72318 [doi] PLoS Biol 9(7)
    • SGD Paper
  • Bai L, et al. (2010) Nucleosome-depleted regions in cell-cycle-regulated promoters ensure reliable gene expression in every cell cycle. Dev Cell 18(4):544-55 PMID:20412770
    • SGD Paper
    • DOI full text
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  • Charvin G, et al. (2010) Origin of irreversibility of cell cycle start in budding yeast. PLoS Biol 8(1):e1000284 PMID:20087409
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    • PMC full text
    • PubMed
  • Charvin G, et al. (2009) Forced periodic expression of G1 cyclins phase-locks the budding yeast cell cycle. Proc Natl Acad Sci U S A 106(16):6632-7 PMID:19346485
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  • Gertz J, et al. (2009) Analysis of combinatorial cis-regulation in synthetic and genomic promoters. Nature 457(7226):215-8 PMID:19029883
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  • Charvin G, et al. (2008) A microfluidic device for temporally controlled gene expression and long-term fluorescent imaging in unperturbed dividing yeast cells. PLoS One 3(1):e1468 PMID:18213377
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  • Skotheim JM, et al. (2008) Positive feedback of G1 cyclins ensures coherent cell cycle entry. Nature 454(7202):291-6 PMID:18633409
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  • Di Talia S, et al. (2007) The effects of molecular noise and size control on variability in the budding yeast cell cycle. Nature 450(7173):1272
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  • Di Talia S, et al. (2007) The effects of molecular noise and size control on variability in the budding yeast cell cycle. Nature 448(7156):947-51 PMID:17713537
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  • Morozov AV and Siggia ED (2007) Connecting protein structure with predictions of regulatory sites. Proc Natl Acad Sci U S A 104(17):7068-73 PMID:17438293
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  • Bean JM, et al. (2006) Coherence and timing of cell cycle start examined at single-cell resolution. Mol Cell 21(1):3-14 PMID:16387649
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  • Ligr M, et al. (2006) Gene expression from random libraries of yeast promoters. Genetics 172(4):2113-22 PMID:16415362
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  • Bean JM, et al. (2005) High functional overlap between MluI cell-cycle box binding factor and Swi4/6 cell-cycle box binding factor in the G1/S transcriptional program in Saccharomyces cerevisiae. Genetics 171(1):49-61 PMID:15965243
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  • Cross FR and Siggia ED (2005) Mode locking the cell cycle. Phys Rev E Stat Nonlin Soft Matter Phys 72(2 Pt 1):021910 PMID:16196607
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  • Siddharthan R, et al. (2005) PhyloGibbs: a Gibbs sampling motif finder that incorporates phylogeny. PLoS Comput Biol 1(7):e67 PMID:16477324
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  • Siggia ED (2005) Computational methods for transcriptional regulation. Curr Opin Genet Dev 15(2):214-21 PMID:15797205
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  • Swain PS and Siggia ED (2002) The role of proofreading in signal transduction specificity. Biophys J 82(6):2928-33 PMID:12023215
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  • Bussemaker HJ, et al. (2001) Regulatory element detection using correlation with expression. Nat Genet 27(2):167-71 PMID:11175784
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  • Bussemaker HJ, et al. (2000) Building a dictionary for genomes: identification of presumptive regulatory sites by statistical analysis. Proc Natl Acad Sci U S A 97(18):10096-100 PMID:10944202
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  • Bussemaker HJ, et al. (2000) Regulatory element detection using a probabilistic segmentation model. Proc Int Conf Intell Syst Mol Biol 8:67-74 PMID:10977067
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    • PubMed
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