Kang Y, et al. (2020) Dual threshold optimization and network inference reveal convergent evidence from TF binding locations and TF perturbation responses. Genome Res 30(3):459-471 PMID:32060051
Mitra R and Gupta M (2011) A continuous-index Bayesian hidden Markov model for prediction of nucleosome positioning in genomic DNA. Biostatistics 12(3):462-77 PMID:21193724