Author: Martin DE

References 17 references

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Eser P, et al. (2014) Periodic mRNA synthesis and degradation co-operate during cell cycle gene expression. Mol Syst Biol 10(1):717 PMID:24489117
Dümcke S, et al. (2012) One Hand Clapping: detection of condition-specific transcription factor interactions from genome-wide gene activity data. Nucleic Acids Res 40(18):8883-92 PMID:22844089
Mayer A, et al. (2012) The spt5 C-terminal region recruits yeast 3' RNA cleavage factor I. Mol Cell Biol 32(7):1321-31 PMID:22290438
Niederberger T, et al. (2012) MC EMiNEM maps the interaction landscape of the Mediator. PLoS Comput Biol 8(6):e1002568 PMID:22737066
Schwalb B, et al. (2012) Measurement of genome-wide RNA synthesis and decay rates with Dynamic Transcriptome Analysis (DTA). Bioinformatics 28(6):884-5 PMID:22285829
Miller C, et al. (2011) Dynamic transcriptome analysis measures rates of mRNA synthesis and decay in yeast. Mol Syst Biol 7:458 PMID:21206491
Seizl M, et al. (2011) A conserved GA element in TATA-less RNA polymerase II promoters. PLoS One 6(11):e27595 PMID:22110682
Koschubs T, et al. (2009) Identification, structure, and functional requirement of the Mediator submodule Med7N/31. EMBO J 28(1):69-80 PMID:19057509
Gander S, et al. (2008) Identification of the rapamycin-sensitive phosphorylation sites within the Ser/Thr-rich domain of the yeast Npr1 protein kinase. Rapid Commun Mass Spectrom 22(23):3743-53 PMID:18980262
Jasiak AJ, et al. (2008) Genome-associated RNA polymerase II includes the dissociable Rpb4/7 subcomplex. J Biol Chem 283(39):26423-7 PMID:18667430
Sturgill TW, et al. (2008) TOR1 and TOR2 have distinct locations in live cells. Eukaryot Cell 7(10):1819-30 PMID:18723607
Martin DE, et al. (2006) Regulation of ribosome biogenesis: where is TOR? Cell Metab 4(4):259-60 PMID:17011497
Mulet JM, et al. (2006) Mutual antagonism of target of rapamycin and calcineurin signaling. J Biol Chem 281(44):33000-7 PMID:16959779
Martin DE and Hall MN (2005) The expanding TOR signaling network. Curr Opin Cell Biol 17(2):158-66 PMID:15780592
Martin DE, et al. (2004) Rank Difference Analysis of Microarrays (RDAM), a novel approach to statistical analysis of microarray expression profiling data. BMC Bioinformatics 5:148 PMID:15476558
Martin DE, et al. (2004) TOR regulates ribosomal protein gene expression via PKA and the Forkhead transcription factor FHL1. Cell 119(7):969-79 PMID:15620355
Schmelzle T, et al. (2004) Activation of the RAS/cyclic AMP pathway suppresses a TOR deficiency in yeast. Mol Cell Biol 24(1):338-51 PMID:14673167