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  • Author: Luscombe NM
  • References

Author: Luscombe NM


References 20 references


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  • Varier RA, et al. (2022) N6-methyladenosine (m6A) reader Pho92 is recruited co-transcriptionally and couples translation to mRNA decay to promote meiotic fitness in yeast. Elife 11 PMID:36422864
    • SGD Paper
    • DOI full text
    • PMC full text
    • PubMed
  • Chia M, et al. (2021) High-resolution analysis of cell-state transitions in yeast suggests widespread transcriptional tuning by alternative starts. Genome Biol 22(1):34 PMID:33446241
    • SGD Paper
    • DOI full text
    • PMC full text
    • PubMed
  • Chia M, et al. (2021) Author Correction: High-resolution analysis of cell-state transitions in yeast suggests widespread transcriptional tuning by alternative starts. Genome Biol 22(1):46 PMID:33494761
    • SGD Paper
    • DOI full text
    • PMC full text
    • PubMed
  • Leger A, et al. (2021) RNA modifications detection by comparative Nanopore direct RNA sequencing. Nat Commun 12(1):7198 PMID:34893601
    • SGD Paper
    • DOI full text
    • PMC full text
    • PubMed
  • Moretto F, et al. (2021) Transcription levels of a noncoding RNA orchestrate opposing regulatory and cell fate outcomes in yeast. Cell Rep 34(3):108643 PMID:33472063
    • SGD Paper
    • DOI full text
    • PMC full text
    • PubMed
  • Strittmatter LM, et al. (2021) psiCLIP reveals dynamic RNA binding by DEAH-box helicases before and after exon ligation. Nat Commun 12(1):1488 PMID:33674615
    • SGD Paper
    • DOI full text
    • PMC full text
    • PubMed
  • Cakiroglu A, et al. (2019) Genome-wide reconstitution of chromatin transactions reveals that RSC preferentially disrupts H2AZ-containing nucleosomes. Genome Res 29(6):988-998 PMID:31097474
    • SGD Paper
    • DOI full text
    • PMC full text
    • PubMed
  • Cakiroglu SA, et al. (2016) Backmasking in the yeast genome: encoding overlapping information for protein-coding and RNA degradation. Nucleic Acids Res 44(17):8065-72 PMID:27492286
    • SGD Paper
    • DOI full text
    • PMC full text
    • PubMed
  • Castelnuovo M, et al. (2014) Role of histone modifications and early termination in pervasive transcription and antisense-mediated gene silencing in yeast. Nucleic Acids Res 42(7):4348-62 PMID:24497191
    • SGD Paper
    • DOI full text
    • PMC full text
    • PubMed
  • Reimand J, et al. (2012) m:Explorer: multinomial regression models reveal positive and negative regulators of longevity in yeast quiescence. Genome Biol 13(6):R55 PMID:22720667
    • SGD Paper
    • DOI full text
    • PMC full text
    • PubMed
  • Tan-Wong SM, et al. (2012) Gene loops enhance transcriptional directionality. Science 338(6107):671-5 PMID:23019609
    • SGD Paper
    • DOI full text
    • PMC full text
    • PubMed
  • Zaugg JB and Luscombe NM (2012) A genomic model of condition-specific nucleosome behavior explains transcriptional activity in yeast. Genome Res 22(1):84-94 PMID:21930892
    • SGD Paper
    • DOI full text
    • PMC full text
    • PubMed
  • Reimand J, et al. (2010) Comprehensive reanalysis of transcription factor knockout expression data in Saccharomyces cerevisiae reveals many new targets. Nucleic Acids Res 38(14):4768-77 PMID:20385592
    • SGD Paper
    • DOI full text
    • PMC full text
    • PubMed
  • Balaji S, et al. (2006) Comprehensive analysis of combinatorial regulation using the transcriptional regulatory network of yeast. J Mol Biol 360(1):213-27 PMID:16762362
    • SGD Paper
    • DOI full text
    • PubMed
  • Luscombe NM, et al. (2004) Genomic analysis of regulatory network dynamics reveals large topological changes. Nature 431(7006):308-12 PMID:15372033
    • SGD Paper
    • DOI full text
    • PubMed
  • Qian J, et al. (2003) Prediction of regulatory networks: genome-wide identification of transcription factor targets from gene expression data. Bioinformatics 19(15):1917-26 PMID:14555624
    • SGD Paper
    • DOI full text
    • PubMed
  • Yu H, et al. (2003) Genomic analysis of gene expression relationships in transcriptional regulatory networks. Trends Genet 19(8):422-7 PMID:12902159
    • SGD Paper
    • DOI full text
    • PubMed
  • Echols N, et al. (2002) Comprehensive analysis of amino acid and nucleotide composition in eukaryotic genomes, comparing genes and pseudogenes. Nucleic Acids Res 30(11):2515-23 PMID:12034841
    • SGD Paper
    • DOI full text
    • PMC full text
    • PubMed
  • Horak CE, et al. (2002) Complex transcriptional circuitry at the G1/S transition in Saccharomyces cerevisiae. Genes Dev 16(23):3017-33 PMID:12464632
    • SGD Paper
    • DOI full text
    • PMC full text
    • PubMed
    • Reference supplement
  • Luscombe NM, et al. (2002) The dominance of the population by a selected few: power-law behaviour applies to a wide variety of genomic properties. Genome Biol 3(8):RESEARCH0040 PMID:12186647
    • SGD Paper
    • DOI full text
    • PMC full text
    • PubMed
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