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  • Author: Lee I
  • References

Author: Lee I


References 24 references


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  • Kim H, et al. (2015) Network-assisted genetic dissection of pathogenicity and drug resistance in the opportunistic human pathogenic fungus Cryptococcus neoformans. Sci Rep 5:8767 PMID:25739925
    • SGD Paper
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  • Shin J and Lee I (2015) Co-Inheritance Analysis within the Domains of Life Substantially Improves Network Inference by Phylogenetic Profiling. PLoS One 10(9):e0139006 PMID:26394049
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  • Kim H, et al. (2014) YeastNet v3: a public database of data-specific and integrated functional gene networks for Saccharomyces cerevisiae. Nucleic Acids Res 42(Database issue):D731-6 PMID:24165882
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  • Ye C, et al. (2014) Deletion of the cardiolipin-specific phospholipase Cld1 rescues growth and life span defects in the tafazzin mutant: implications for Barth syndrome. J Biol Chem 289(6):3114-25 PMID:24318983
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  • Bu Y, et al. (2013) Identification and characterization of a PutAMT1;1 gene from Puccinellia tenuiflora. PLoS One 8(12):e83111 PMID:24340088
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  • Venkatesh S, et al. (2012) Multitasking in the mitochondrion by the ATP-dependent Lon protease. Biochim Biophys Acta 1823(1):56-66 PMID:22119779
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  • Barnes VL, et al. (2010) Loss of the SIN3 transcriptional corepressor results in aberrant mitochondrial function. BMC Biochem 11:26 PMID:20618965
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  • Kim E, et al. (2010) Assessment of effectiveness of the network-guided genetic screen. Mol Biosyst 6(10):1803-6 PMID:20697632
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  • Lee I, et al. (2010) Predicting genetic modifier loci using functional gene networks. Genome Res 20(8):1143-53 PMID:20538624
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  • Lee I and Marcotte EM (2009) Effects of functional bias on supervised learning of a gene network model. Methods Mol Biol 541:463-75 PMID:19381535
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  • Li Z, et al. (2009) Rational extension of the ribosome biogenesis pathway using network-guided genetics. PLoS Biol 7(10):e1000213 PMID:19806183
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  • Lee I and Marcotte EM (2008) Integrating functional genomics data. Methods Mol Biol 453:267-78 PMID:18712309
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  • Lee I and Schindelin H (2008) Structural insights into E1-catalyzed ubiquitin activation and transfer to conjugating enzymes. Cell 134(2):268-78 PMID:18662542
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  • Lee I and Suzuki CK (2008) Functional mechanics of the ATP-dependent Lon protease- lessons from endogenous protein and synthetic peptide substrates. Biochim Biophys Acta 1784(5):727-35 PMID:18359303
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  • Choi K, et al. (2007) Arabidopsis homologs of components of the SWR1 complex regulate flowering and plant development. Development 134(10):1931-41 PMID:17470967
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  • Hart GT, et al. (2007) A high-accuracy consensus map of yeast protein complexes reveals modular nature of gene essentiality. BMC Bioinformatics 8:236 PMID:17605818
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  • Lee I, et al. (2007) An improved, bias-reduced probabilistic functional gene network of baker's yeast, Saccharomyces cerevisiae. PLoS One 2(10):e988 PMID:17912365
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  • McGary KL, et al. (2007) Broad network-based predictability of Saccharomyces cerevisiae gene loss-of-function phenotypes. Genome Biol 8(12):R258 PMID:18053250
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  • Choi K, et al. (2005) SUPPRESSOR OF FRIGIDA3 encodes a nuclear ACTIN-RELATED PROTEIN6 required for floral repression in Arabidopsis. Plant Cell 17(10):2647-60 PMID:16155178
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  • Bork P, et al. (2004) Protein interaction networks from yeast to human. Curr Opin Struct Biol 14(3):292-9 PMID:15193308
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  • Lee I, et al. (2004) A probabilistic functional network of yeast genes. Science 306(5701):1555-8 PMID:15567862
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    • Reference supplement
  • Lu B, et al. (2003) The ATP-dependent Lon protease of Mus musculus is a DNA-binding protein that is functionally conserved between yeast and mammals. Gene 306:45-55 PMID:12657466
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  • Xue Y, et al. (2000) Saccharomyces cerevisiae RAI1 (YGL246c) is homologous to human DOM3Z and encodes a protein that binds the nuclear exoribonuclease Rat1p. Mol Cell Biol 20(11):4006-15 PMID:10805743
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  • Lee SG, et al. (1995) Identification and characterization of a human cDNA homologous to yeast SKI2. Genomics 25(3):660-6 PMID:7759100
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