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  • Author: Jordán-Pla A
  • References

Author: Jordán-Pla A


References 16 references


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  • Jordán-Pla A, et al. (2025) Proper 5'-3' cotranslational mRNA decay in yeast requires import of Xrn1 to the nucleus. PLoS One 20(1):e0308195 PMID:39841709
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  • Cuevas-Bermúdez A, et al. (2024) The association of the RSC remodeler complex with chromatin is influenced by the prefoldin-like Bud27 and determines nucleosome positioning and polyadenylation sites usage in Saccharomyces cerevisiae. Biochim Biophys Acta Gene Regul Mech 1867(1):194995 PMID:37967810
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  • Kelbert M, et al. (2024) The zinc-finger transcription factor Sfp1 imprints specific classes of mRNAs and links their synthesis to cytoplasmic decay. Elife 12 PMID:39356734
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  • Pérez-Ortín JE, et al. (2024) Comparison of Xrn1 and Rat1 5' → 3' exoribonucleases in budding yeast supports the specific role of Xrn1 in cotranslational mRNA decay. Yeast 41(7):458-472 PMID:38874348
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  • Jordán-Pla A and Pérez-Ortín JE (2022) High-Resolution Deep Sequencing of Nascent Transcription in Yeast with BioGRO-seq. Methods Mol Biol 2477:57-70 PMID:35524111
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  • Begley V, et al. (2021) Xrn1 influence on gene transcription results from the combination of general effects on elongating RNA pol II and gene-specific chromatin configuration. RNA Biol 18(9):1310-1323 PMID:33138675
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  • Martínez-Fernández V, et al. (2020) Prefoldin-like Bud27 influences the transcription of ribosomal components and ribosome biogenesis in Saccharomyces cerevisiae. RNA 26(10):1360-1379 PMID:32503921
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  • Begley V, et al. (2019) The mRNA degradation factor Xrn1 regulates transcription elongation in parallel to Ccr4. Nucleic Acids Res 47(18):9524-9541 PMID:31392315
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  • Calvo O, et al. (2019) The telomeric Cdc13-Stn1-Ten1 complex regulates RNA polymerase II transcription. Nucleic Acids Res 47(12):6250-6268 PMID:31006804
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  • Gutiérrez G, et al. (2017) Subtracting the sequence bias from partially digested MNase-seq data reveals a general contribution of TFIIS to nucleosome positioning. Epigenetics Chromatin 10(1):58 PMID:29212533
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  • Gómez-Navarro N, et al. (2016) Defects in the NC2 repressor affect both canonical and non-coding RNA polymerase II transcription initiation in yeast. BMC Genomics 17:183 PMID:26939779
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  • Jordán-Pla A, et al. (2016) Biotin-Genomic Run-On (Bio-GRO): A High-Resolution Method for the Analysis of Nascent Transcription in Yeast. Methods Mol Biol 1361:125-39 PMID:26483020
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  • Jordán-Pla A, et al. (2015) Chromatin-dependent regulation of RNA polymerases II and III activity throughout the transcription cycle. Nucleic Acids Res 43(2):787-802 PMID:25550430
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  • Medina DA, et al. (2014) Cytoplasmic 5'-3' exonuclease Xrn1p is also a genome-wide transcription factor in yeast. Front Genet 5:1 PMID:24567736
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  • Pérez-Ortín JE, et al. (2011) Genomic insights into the different layers of gene regulation in yeast. Genet Res Int 2011:989303 PMID:22567375
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  • Pérez-Ortín JE, et al. (2011) A genomic view of mRNA turnover in yeast. C R Biol 334(8-9):647-54 PMID:21819946
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