AboutBlogDownloadExploreHelpGet Data
Email Us Mastodon BlueSky Facebook LinkedIn YouTube
Saccharomyces Genome Database
  • Saccharomyces Genome Database
    Saccharomyces Genome Database
  • Menu
  • Analyze
    • Gene Lists
    • BLAST
    • Fungal BLAST
    • GO Term Finder
    • GO Slim Mapper
    • Pattern Matching
    • Design Primers
    • Restriction Site Mapper
  • Sequence
    • Download
    • Genome Browser
    • BLAST
    • Fungal BLAST
    • Gene/Sequence Resources
    • Reference Genome
      • Download Genome
      • Genome Snapshot
      • Chromosome History
      • Systematic Sequencing Table
      • Original Sequence Papers
    • Strains and Species
      • Variant Viewer
      • Align Strain Sequences
    • Resources
      • UniProtKB
      • InterPro (EBI)
      • HomoloGene (NCBI)
      • YGOB (Trinity College)
      • AlphaFold
  • Function
    • Gene Ontology
      • GO Term Finder
      • GO Slim Mapper
      • GO Slim Mapping File
    • Expression
    • Biochemical Pathways
    • Phenotypes
      • Browse All Phenotypes
    • Interactions
    • YeastGFP
    • Resources
      • GO Consortium
      • BioGRID (U. Toronto)
  • Literature
    • Full-text Search
    • New Yeast Papers
    • YeastBook
    • Resources
      • PubMed (NCBI)
      • PubMed Central (NCBI)
      • Google Scholar
  • Community
    • Community Forum
    • Colleague Information
      • Find a Colleague
      • Add or Update Info
      • Find a Yeast Lab
    • Education
    • Meetings
    • Nomenclature
      • Submit a Gene Registration
      • Gene Registry
      • Nomenclature Conventions
    • Methods and Reagents
      • Strains
    • Historical Data
      • Physical & Genetic Maps
      • Genetic Maps
      • Genetic Loci
      • ORFMap Chromosomes
      • Sequence
    • Submit Data
    • API
  • Info & Downloads
    • About
    • Blog
    • Downloads
    • Site Map
    • Help
  • Author: Huang H
  • References

Author: Huang H


References 66 references


No citations for this author.

Download References (.nbib)

  • Du F, et al. (2024) Optimizing multicopy chromosomal integration for stable high-performing strains. Nat Chem Biol 20(12):1670-1679 PMID:38858530
    • SGD Paper
    • DOI full text
    • PubMed
  • Nguyen XTA, et al. (2024) MFSD7c functions as a transporter of choline at the blood-brain barrier. Cell Res 34(3):245-257 PMID:38302740
    • SGD Paper
    • DOI full text
    • PMC full text
    • PubMed
  • Xiao W, et al. (2024) Enhanced synthesis of S-adenosyl-L-methionine through combinatorial metabolic engineering and Bayesian optimization in Saccharomyces cerevisiae. Biotechnol J 19(3):e2300650 PMID:38479990
    • SGD Paper
    • DOI full text
    • PubMed
  • Blomqvist EK, et al. (2023) A disease associated mutant reveals how Ltv1 orchestrates RP assembly and rRNA folding of the small ribosomal subunit head. PLoS Genet 19(11):e1010862 PMID:37910572
    • SGD Paper
    • DOI full text
    • PMC full text
    • PubMed
  • Li Y and Huang H (2023) Structural basis for H2A-H2B recognitions by human Spt16. Biochem Biophys Res Commun 651:85-91 PMID:36801613
    • SGD Paper
    • DOI full text
    • PubMed
  • McCool MA, et al. (2023) Human nucleolar protein 7 (NOL7) is required for early pre-rRNA accumulation and pre-18S rRNA processing. RNA Biol 20(1):257-271 PMID:37246770
    • SGD Paper
    • DOI full text
    • PMC full text
    • PubMed
  • Zhang Z, et al. (2023) High-throughput screening of microbial strains in large-scale microfluidic droplets. Front Bioeng Biotechnol 11:1105277 PMID:36970622
    • SGD Paper
    • DOI full text
    • PMC full text
    • PubMed
  • Huang H, et al. (2022) Identification of Six Thiolases and Their Effects on Fatty Acid and Ergosterol Biosynthesis in Aspergillus oryzae. Appl Environ Microbiol 88(6):e0237221 PMID:35138925
    • SGD Paper
    • DOI full text
    • PMC full text
    • PubMed
  • Huang H, et al. (2022) The modifying enzyme Tsr3 establishes the hierarchy of Rio kinase binding in 40S ribosome assembly. RNA 28(4):568-582 PMID:35031584
    • SGD Paper
    • DOI full text
    • PMC full text
    • PubMed
  • Liu X, et al. (2022) Using DMS-MaPseq to uncover the roles of DEAD-box proteins in ribosome assembly. Methods 204:249-257 PMID:35550176
    • SGD Paper
    • DOI full text
    • PMC full text
    • PubMed
  • Xiao F, et al. (2022) Metabolic Engineering of Saccharomyces cerevisiae for High-Level Production of Chlorogenic Acid from Glucose. ACS Synth Biol 11(2):800-811 PMID:35107250
    • SGD Paper
    • DOI full text
    • PubMed
  • Huang H and Karbstein K (2021) Assembly factors chaperone ribosomal RNA folding by isolating helical junctions that are prone to misfolding. Proc Natl Acad Sci U S A 118(25) PMID:34135123
    • SGD Paper
    • DOI full text
    • PMC full text
    • PubMed
  • Rai J, et al. (2021) An open interface in the pre-80S ribosome coordinated by ribosome assembly factors Tsr1 and Dim1 enables temporal regulation of Fap7. RNA 27(2):221-233 PMID:33219089
    • SGD Paper
    • DOI full text
    • PMC full text
    • PubMed
  • Zhang ZX, et al. (2021) Developing GDi-CRISPR System for Multi-copy Integration in Saccharomyces cerevisiae. Appl Biochem Biotechnol 193(7):2379-2388 PMID:33660219
    • SGD Paper
    • DOI full text
    • PubMed
  • Zhang ZX, et al. (2021) Recent advances in the application of multiplex genome editing in Saccharomyces cerevisiae. Appl Microbiol Biotechnol 105(10):3873-3882 PMID:33907890
    • SGD Paper
    • DOI full text
    • PubMed
  • Huang H, et al. (2020) Screening strains for microbial biosorption technology of cadmium. Chemosphere 251:126428 PMID:32169714
    • SGD Paper
    • DOI full text
    • PubMed
  • Huang H, et al. (2020) Quality control of 40S ribosome head assembly ensures scanning competence. J Cell Biol 219(11) PMID:33007085
    • SGD Paper
    • DOI full text
    • PMC full text
    • PubMed
  • Mei X, et al. (2020) Preparation, structural analysis and antioxidant activities of phosphorylated (1 → 3)-β-d-glucan. Food Chem 309:125791 PMID:31699554
    • SGD Paper
    • DOI full text
    • PubMed
  • Yu S, et al. (2020) High-level production of glucose oxidase in Pichia pastoris: Effects of Hac1p overexpression on cell physiology and enzyme expression. Enzyme Microb Technol 141:109671 PMID:33051008
    • SGD Paper
    • DOI full text
    • PubMed
  • Yin Z, et al. (2019) Psp2, a novel regulator of autophagy that promotes autophagy-related protein translation. Cell Res 29(12):994-1008 PMID:31666677
    • SGD Paper
    • DOI full text
    • PMC full text
    • PubMed
  • Collins JC, et al. (2018) Ribosome biogenesis factor Ltv1 chaperones the assembly of the small subunit head. J Cell Biol 217(12):4141-4154 PMID:30348748
    • SGD Paper
    • DOI full text
    • PMC full text
    • PubMed
  • Huang H, et al. (2018) Landscape of the regulatory elements for lysine 2-hydroxyisobutyrylation pathway. Cell Res 28(1):111-125 PMID:29192674
    • SGD Paper
    • DOI full text
    • PMC full text
    • PubMed
  • Ji RY, et al. (2018) Metabolic Engineering of Yeast for the Production of 3-Hydroxypropionic Acid. Front Microbiol 9:2185 PMID:30298059
    • SGD Paper
    • DOI full text
    • PMC full text
    • PubMed
  • Liu Y and Huang H (2018) Expression of single-domain antibody in different systems. Appl Microbiol Biotechnol 102(2):539-551 PMID:29177623
    • SGD Paper
    • DOI full text
    • PubMed
  • Yang Q, et al. (2018) Effects of dispersible MoS2 nanosheets and Nano-silver coexistence on the metabolome of yeast. Chemosphere 198:216-225 PMID:29421733
    • SGD Paper
    • DOI full text
    • PubMed
  • Yu Y, et al. (2018) Effect of Bulk MoS₂ on the Metabolic Profile of Yeast. J Nanosci Nanotechnol 18(6):3901-3907 PMID:29442725
    • SGD Paper
    • DOI full text
    • PubMed
  • Zhu L, et al. (2018) Improvement of Lead Tolerance of Saccharomyces cerevisiae by Random Mutagenesis of Transcription Regulator SPT3. Appl Biochem Biotechnol 184(1):155-167 PMID:28656551
    • SGD Paper
    • DOI full text
    • PubMed
  • Fan G, et al. (2017) Multiprotein-bridging factor 1 regulates vegetative growth, osmotic stress, and virulence in Magnaporthe oryzae. Curr Genet 63(2):293-309 PMID:27485943
    • SGD Paper
    • DOI full text
    • PubMed
  • Gu Q, et al. (2017) FvSet2 regulates fungal growth, pathogenicity, and secondary metabolism in Fusarium verticillioides. Fungal Genet Biol 107:24-30 PMID:28778753
    • SGD Paper
    • DOI full text
    • PubMed
  • Wan LC, et al. (2017) Proteomic analysis of the human KEOPS complex identifies C14ORF142 as a core subunit homologous to yeast Gon7. Nucleic Acids Res 45(2):805-817 PMID:27903914
    • SGD Paper
    • DOI full text
    • PMC full text
    • PubMed
  • Chen S, et al. (2015) Structure-function studies of histone H3/H4 tetramer maintenance during transcription by chaperone Spt2. Genes Dev 29(12):1326-40 PMID:26109053
    • SGD Paper
    • DOI full text
    • PMC full text
    • PubMed
  • Huang H, et al. (2015) Bulk RNA degradation by nitrogen starvation-induced autophagy in yeast. EMBO J 34(2):154-68 PMID:25468960
    • SGD Paper
    • DOI full text
    • PMC full text
    • PubMed
  • Wang H, et al. (2015) Correlated Protein Function Prediction via Maximization of Data-Knowledge Consistency. J Comput Biol 22(6):546-62 PMID:25922963
    • SGD Paper
    • DOI full text
    • PubMed
  • Chen C, et al. (2014) Software for pre-processing Illumina next-generation sequencing short read sequences. Source Code Biol Med 9:8 PMID:24955109
    • SGD Paper
    • DOI full text
    • PMC full text
    • PubMed
  • Huang H, et al. (2014) E2 enzyme inhibition by stabilization of a low-affinity interface with ubiquitin. Nat Chem Biol 10(2):156-163 PMID:24316736
    • SGD Paper
    • DOI full text
    • PMC full text
    • PubMed
  • Wang L, et al. (2014) MACE: model based analysis of ChIP-exo. Nucleic Acids Res 42(20):e156 PMID:25249628
    • SGD Paper
    • DOI full text
    • PMC full text
    • PubMed
  • Wang YX, et al. (2014) Gene coexpression measures in large heterogeneous samples using count statistics. Proc Natl Acad Sci U S A 111(46):16371-6 PMID:25288767
    • SGD Paper
    • DOI full text
    • PMC full text
    • PubMed
  • Yue Z, et al. (2014) SLDR: a computational technique to identify novel genetic regulatory relationships. BMC Bioinformatics 15 Suppl 11(Suppl 11):S1 PMID:25350940
    • SGD Paper
    • DOI full text
    • PMC full text
    • PubMed
  • Findlay GM, et al. (2013) Interaction domains of Sos1/Grb2 are finely tuned for cooperative control of embryonic stem cell fate. Cell 152(5):1008-20 PMID:23452850
    • SGD Paper
    • DOI full text
    • PubMed
  • Ross KE, et al. (2013) Construction of protein phosphorylation networks by data mining, text mining and ontology integration: analysis of the spindle checkpoint. Database (Oxford) 2013:bat038 PMID:23749465
    • SGD Paper
    • DOI full text
    • PMC full text
    • PubMed
  • Wang H, et al. (2013) Function-function correlated multi-label protein function prediction over interaction networks. J Comput Biol 20(4):322-43 PMID:23560867
    • SGD Paper
    • DOI full text
    • PubMed
  • Li X, et al. (2012) Structure of C-terminal tandem BRCT repeats of Rtt107 protein reveals critical role in interaction with phosphorylated histone H2A during DNA damage repair. J Biol Chem 287(12):9137-46 PMID:22262834
    • SGD Paper
    • DOI full text
    • PMC full text
    • PubMed
  • Paci A, et al. (2012) The stability of the small nucleolar ribonucleoprotein (snoRNP) assembly protein Pih1 in Saccharomyces cerevisiae is modulated by its C terminus. J Biol Chem 287(52):43205-14 PMID:23139418
    • SGD Paper
    • DOI full text
    • PMC full text
    • PubMed
  • Wang Y, et al. (2012) Coiled-coil networking shapes cell molecular machinery. Mol Biol Cell 23(19):3911-22 PMID:22875988
    • SGD Paper
    • DOI full text
    • PMC full text
    • PubMed
  • Huang H, et al. (2011) Identification of crucial yeast inhibitors in bio-ethanol and improvement of fermentation at high pH and high total solids. Bioresour Technol 102(16):7486-93 PMID:21624827
    • SGD Paper
    • DOI full text
    • PubMed
  • Hussein B, et al. (2011) G1/S transcription factor orthologues Swi4p and Swi6p are important but not essential for cell proliferation and influence hyphal development in the fungal pathogen Candida albicans. Eukaryot Cell 10(3):384-97 PMID:21257795
    • SGD Paper
    • DOI full text
    • PMC full text
    • PubMed
  • Liu J, et al. (2011) Solution structure of tandem SH2 domains from Spt6 protein and their binding to the phosphorylated RNA polymerase II C-terminal domain. J Biol Chem 286(33):29218-29226 PMID:21676864
    • SGD Paper
    • DOI full text
    • PMC full text
    • PubMed
  • Wu F, et al. (2011) The 1.9Å crystal structure of Prp20p from Saccharomyces cerevisiae and its binding properties to Gsp1p and histones. J Struct Biol 174(1):213-22 PMID:21093592
    • SGD Paper
    • DOI full text
    • PubMed
  • Liu Y, et al. (2010) Structural analysis of Rtt106p reveals a DNA binding role required for heterochromatin silencing. J Biol Chem 285(6):4251-4262 PMID:20007951
    • SGD Paper
    • DOI full text
    • PMC full text
    • PubMed
  • Yamada J, et al. (2010) A bimodal distribution of two distinct categories of intrinsically disordered structures with separate functions in FG nucleoporins. Mol Cell Proteomics 9(10):2205-24 PMID:20368288
    • SGD Paper
    • DOI full text
    • PMC full text
    • PubMed
  • Chen H, et al. (2009) Crystallization and preliminary X-ray diffraction analysis of ARO9, an aromatic aminotransferase from Saccharomyces cerevisiae. Protein Pept Lett 16(4):450-3 PMID:19356146
    • SGD Paper
    • DOI full text
    • PubMed
  • Huang H and Bader JS (2009) Precision and recall estimates for two-hybrid screens. Bioinformatics 25(3):372-8 PMID:19091773
    • SGD Paper
    • DOI full text
    • PMC full text
    • PubMed
  • Huang H, et al. (2009) HistoneHits: a database for histone mutations and their phenotypes. Genome Res 19(4):674-81 PMID:19218532
    • SGD Paper
    • DOI full text
    • PMC full text
    • PubMed
  • Dai J, et al. (2008) Probing nucleosome function: a highly versatile library of synthetic histone H3 and H4 mutants. Cell 134(6):1066-78 PMID:18805098
    • SGD Paper
    • DOI full text
    • PMC full text
    • PubMed
  • Huang H, et al. (2008) The crystal structure and identification of NQM1/YGR043C, a transaldolase from Saccharomyces cerevisiae. Proteins 73(4):1076-81 PMID:18831051
    • SGD Paper
    • DOI full text
    • PubMed
  • Huang H, et al. (2007) Where have all the interactions gone? Estimating the coverage of two-hybrid protein interaction maps. PLoS Comput Biol 3(11):e214 PMID:18039026
    • SGD Paper
    • DOI full text
    • PMC full text
    • PubMed
  • Kim K, et al. (2007) Measuring similarities between gene expression profiles through new data transformations. BMC Bioinformatics 8:29 PMID:17257435
    • SGD Paper
    • DOI full text
    • PMC full text
    • PubMed
  • Xu J, et al. (2006) Solution structure of Urm1 and its implications for the origin of protein modifiers. Proc Natl Acad Sci U S A 103(31):11625-30 PMID:16864801
    • SGD Paper
    • DOI full text
    • PMC full text
    • PubMed
  • Zhou XJ, et al. (2005) Functional annotation and network reconstruction through cross-platform integration of microarray data. Nat Biotechnol 23(2):238-43 PMID:15654329
    • SGD Paper
    • DOI full text
    • PubMed
  • Freiberg G, et al. (2000) Characterization of novel rad6/ubc2 ubiquitin-conjugating enzyme mutants in yeast. Curr Genet 37(4):221-33 PMID:10803884
    • SGD Paper
    • DOI full text
    • PubMed
  • Lyons TJ, et al. (2000) The metal binding properties of the zinc site of yeast copper-zinc superoxide dismutase: implications for amyotrophic lateral sclerosis. J Biol Inorg Chem 5(2):189-203 PMID:10819464
    • SGD Paper
    • DOI full text
    • PubMed
  • Verdecia MA, et al. (2000) Structure of the human anti-apoptotic protein survivin reveals a dimeric arrangement. Nat Struct Biol 7(7):602-8 PMID:10876248
    • SGD Paper
    • DOI full text
    • PubMed
  • Huang H, et al. (1999) Host genes that affect the target-site distribution of the yeast retrotransposon Ty1. Genetics 151(4):1393-407 PMID:10101165
    • SGD Paper
    • DOI full text
    • PMC full text
    • PubMed
  • Huang H, et al. (1998) Structure of a covalently trapped catalytic complex of HIV-1 reverse transcriptase: implications for drug resistance. Science 282(5394):1669-75 PMID:9831551
    • SGD Paper
    • DOI full text
    • PubMed
  • Qian Z, et al. (1998) Yeast Ty1 retrotransposition is stimulated by a synergistic interaction between mutations in chromatin assembly factor I and histone regulatory proteins. Mol Cell Biol 18(8):4783-92 PMID:9671488
    • SGD Paper
    • DOI full text
    • PMC full text
    • PubMed
  • Huang H, et al. (1997) The ubiquitin-conjugating enzyme Rad6 (Ubc2) is required for silencing in Saccharomyces cerevisiae. Mol Cell Biol 17(11):6693-9 PMID:9343433
    • SGD Paper
    • DOI full text
    • PMC full text
    • PubMed
  • SGD
  • About
  • Blog
  • Help
  • Privacy Policy
  • Creative Commons License
© Stanford University, Stanford, CA 94305.
Back to Top