Houston L, et al. (2022) Frameshifting at collided ribosomes is modulated by elongation factor eEF3 and by integrated stress response regulators Gcn1 and Gcn20. RNA 28(3):320-339 PMID:34916334
Ghoneim DH, et al. (2019) Conservation of location of several specific inhibitory codon pairs in the Saccharomyces sensu stricto yeasts reveals translational selection. Nucleic Acids Res 47(3):1164-1177 PMID:30576464
Wolf AS and Grayhack EJ (2015) Asc1, homolog of human RACK1, prevents frameshifting in yeast by ribosomes stalled at CGA codon repeats. RNA 21(5):935-45 PMID:25792604
Guy MP, et al. (2014) Identification of the determinants of tRNA function and susceptibility to rapid tRNA decay by high-throughput in vivo analysis. Genes Dev 28(15):1721-32 PMID:25085423
Grant TD, et al. (2013) The structure of yeast glutaminyl-tRNA synthetase and modeling of its interaction with tRNA. J Mol Biol 425(14):2480-93 PMID:23583912
Letzring DP, et al. (2013) Translation of CGA codon repeats in yeast involves quality control components and ribosomal protein L1. RNA 19(9):1208-17 PMID:23825054
Dean KM and Grayhack EJ (2012) RNA-ID, a highly sensitive and robust method to identify cis-regulatory sequences using superfolder GFP and a fluorescence-based assay. RNA 18(12):2335-44 PMID:23097427
Grant TD, et al. (2012) Structural conservation of an ancient tRNA sensor in eukaryotic glutaminyl-tRNA synthetase. Nucleic Acids Res 40(8):3723-31 PMID:22180531
Chernyakov I, et al. (2008) Chapter 11. Identification and analysis of tRNAs that are degraded in Saccharomyces cerevisiae due to lack of modifications. Methods Enzymol 449:221-37 PMID:19215761
Chernyakov I, et al. (2008) Degradation of several hypomodified mature tRNA species in Saccharomyces cerevisiae is mediated by Met22 and the 5'-3' exonucleases Rat1 and Xrn1. Genes Dev 22(10):1369-80 PMID:18443146
Jackman JE, et al. (2008) The use of Saccharomyces cerevisiae proteomic libraries to identify RNA-modifying proteins. Methods Mol Biol 488:383-93 PMID:18982304
Kotelawala L, et al. (2008) Identification of yeast tRNA Um(44) 2'-O-methyltransferase (Trm44) and demonstration of a Trm44 role in sustaining levels of specific tRNA(Ser) species. RNA 14(1):158-69 PMID:18025252
Jackman JE, et al. (2007) Identification and characterization of modification enzymes by biochemical analysis of the proteome. Methods Enzymol 425:139-52 PMID:17673082
Malkowski MG, et al. (2007) Blocking S-adenosylmethionine synthesis in yeast allows selenomethionine incorporation and multiwavelength anomalous dispersion phasing. Proc Natl Acad Sci U S A 104(16):6678-83 PMID:17426150
Alexandrov A, et al. (2005) tRNA m7G methyltransferase Trm8p/Trm82p: evidence linking activity to a growth phenotype and implicating Trm82p in maintaining levels of active Trm8p. RNA 11(5):821-30 PMID:15811913
Gelperin DM, et al. (2005) Biochemical and genetic analysis of the yeast proteome with a movable ORF collection. Genes Dev 19(23):2816-26 PMID:16322557
Ma X, et al. (2005) Pseudouridylation of yeast U2 snRNA is catalyzed by either an RNA-guided or RNA-independent mechanism. EMBO J 24(13):2403-13 PMID:15962000
Van Slyke C and Grayhack EJ (2003) The essential transcription factor Reb1p interacts with the CLB2 UAS outside of the G2/M control region. Nucleic Acids Res 31(15):4597-607 PMID:12888520
Martzen MR, et al. (1999) A biochemical genomics approach for identifying genes by the activity of their products. Science 286(5442):1153-5 PMID:10550052
Kuo MH, et al. (1997) Multiple phosphorylated forms of the Saccharomyces cerevisiae Mcm1 protein include an isoform induced in response to high salt concentrations. Mol Cell Biol 17(2):819-32 PMID:9001236
Grayhack EJ (1992) The yeast alpha 1 and MCM1 proteins bind a single strand of their duplex DNA recognition site. Mol Cell Biol 12(8):3573-82 PMID:1630462