Author: Dekker J

References 17 references

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Oomen ME, et al. (2020) Detecting chromatin interactions between and along sister chromatids with SisterC. Nat Methods 17(10):1002-1009 PMID:32968250
Schalbetter SA, et al. (2017) SMC complexes differentially compact mitotic chromosomes according to genomic context. Nat Cell Biol 19(9):1071-1080 PMID:28825700
Belton JM and Dekker J (2015) Measuring Chromatin Structure in Budding Yeast. Cold Spring Harb Protoc 2015(7):614-8 PMID:26134912
Belton JM and Dekker J (2015) Hi-C in Budding Yeast. Cold Spring Harb Protoc 2015(7):649-61 PMID:26134906
Belton JM and Dekker J (2015) Chromosome Conformation Capture Carbon Copy (5C) in Budding Yeast. Cold Spring Harb Protoc 2015(6):593-8 PMID:26034306
Belton JM and Dekker J (2015) Chromosome Conformation Capture (3C) in Budding Yeast. Cold Spring Harb Protoc 2015(6):580-6 PMID:26034304
Belton JM, et al. (2015) The Conformation of Yeast Chromosome III Is Mating Type Dependent and Controlled by the Recombination Enhancer. Cell Rep 13(9):1855-67 PMID:26655901
Hsieh TH, et al. (2015) Mapping Nucleosome Resolution Chromosome Folding in Yeast by Micro-C. Cell 162(1):108-19 PMID:26119342
Rutledge MT, et al. (2015) The yeast genome undergoes significant topological reorganization in quiescence. Nucleic Acids Res 43(17):8299-313 PMID:26202961
Kim KP, et al. (2010) Sister cohesion and structural axis components mediate homolog bias of meiotic recombination. Cell 143(6):924-37 PMID:21145459
Miele A and Dekker J (2009) Mapping cis- and trans- chromatin interaction networks using chromosome conformation capture (3C). Methods Mol Biol 464:105-21 PMID:18951182
Miele A, et al. (2009) Yeast silent mating type loci form heterochromatic clusters through silencer protein-dependent long-range interactions. PLoS Genet 5(5):e1000478 PMID:19424429
Oza P, et al. (2009) Mechanisms that regulate localization of a DNA double-strand break to the nuclear periphery. Genes Dev 23(8):912-27 PMID:19390086
Dekker J (2008) Mapping in vivo chromatin interactions in yeast suggests an extended chromatin fiber with regional variation in compaction. J Biol Chem 283(50):34532-40 PMID:18930918
Dekker J (2007) GC- and AT-rich chromatin domains differ in conformation and histone modification status and are differentially modulated by Rpd3p. Genome Biol 8(6):R116 PMID:17577398
Dekker J, et al. (2002) Capturing chromosome conformation. Science 295(5558):1306-11 PMID:11847345
Cha RS, et al. (2000) Progression of meiotic DNA replication is modulated by interchromosomal interaction proteins, negatively by Spo11p and positively by Rec8p. Genes Dev 14(4):493-503 PMID:10691741