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  • Author: Burkholder AB
  • References

Author: Burkholder AB


References 16 references


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  • Dennen MS, et al. (2024) Hypomorphic mutation in the large subunit of replication protein A affects mutagenesis by human APOBEC cytidine deaminases in yeast. G3 (Bethesda) 14(10) PMID:39150943
    • SGD Paper
    • DOI full text
    • PMC full text
    • PubMed
  • Lujan SA, et al. (2024) Instability throughout the Saccharomyces cerevisiae genome resulting from Pms1 endonuclease deficiency. Nucleic Acids Res 52(16):9574-9585 PMID:39016170
    • SGD Paper
    • DOI full text
    • PMC full text
    • PubMed
  • Marks SA, et al. (2024) Evidence that DNA polymerase δ proofreads errors made by DNA polymerase α across the Saccharomyces cerevisiae nuclear genome. DNA Repair (Amst) 143:103768 PMID:39332392
    • SGD Paper
    • DOI full text
    • PubMed
  • Williams JS, et al. (2024) High fidelity DNA ligation prevents single base insertions in the yeast genome. Nat Commun 15(1):8730 PMID:39379399
    • SGD Paper
    • DOI full text
    • PMC full text
    • PubMed
  • Hudson KM, et al. (2023) Glycidamide-induced hypermutation in yeast single-stranded DNA reveals a ubiquitous clock-like mutational motif in humans. Nucleic Acids Res 51(17):9075-9100 PMID:37471042
    • SGD Paper
    • DOI full text
    • PMC full text
    • PubMed
  • Zhou ZX, et al. (2022) Pif1 family helicases promote mutation avoidance during DNA replication. Nucleic Acids Res 50(22):12844-12855 PMID:36533450
    • SGD Paper
    • DOI full text
    • PMC full text
    • PubMed
  • Zhou ZX, et al. (2021) How asymmetric DNA replication achieves symmetrical fidelity. Nat Struct Mol Biol 28(12):1020-1028 PMID:34887558
    • SGD Paper
    • DOI full text
    • PMC full text
    • PubMed
  • Donnianni RA, et al. (2019) DNA Polymerase Delta Synthesizes Both Strands during Break-Induced Replication. Mol Cell 76(3):371-381.e4 PMID:31495565
    • SGD Paper
    • DOI full text
    • PMC full text
    • PubMed
  • Sakofsky CJ, et al. (2019) Repair of multiple simultaneous double-strand breaks causes bursts of genome-wide clustered hypermutation. PLoS Biol 17(9):e3000464 PMID:31568516
    • SGD Paper
    • DOI full text
    • PMC full text
    • PubMed
  • Williams JS, et al. (2019) Genome-wide mutagenesis resulting from topoisomerase 1-processing of unrepaired ribonucleotides in DNA. DNA Repair (Amst) 84:102641 PMID:31311768
    • SGD Paper
    • DOI full text
    • PMC full text
    • PubMed
  • Zhou ZX, et al. (2019) Roles for DNA polymerase δ in initiating and terminating leading strand DNA replication. Nat Commun 10(1):3992 PMID:31488849
    • SGD Paper
    • DOI full text
    • PMC full text
    • PubMed
  • Burkholder AB, et al. (2018) Muver, a computational framework for accurately calling accumulated mutations. BMC Genomics 19(1):345 PMID:29743009
    • SGD Paper
    • DOI full text
    • PMC full text
    • PubMed
  • Garbacz MA, et al. (2018) Evidence that DNA polymerase δ contributes to initiating leading strand DNA replication in Saccharomyces cerevisiae. Nat Commun 9(1):858 PMID:29487291
    • SGD Paper
    • DOI full text
    • PMC full text
    • PubMed
  • Orebaugh CD, et al. (2018) Mapping Ribonucleotides Incorporated into DNA by Hydrolytic End-Sequencing. Methods Mol Biol 1672:329-345 PMID:29043634
    • SGD Paper
    • DOI full text
    • PubMed
  • Clausen AR, et al. (2015) Tracking replication enzymology in vivo by genome-wide mapping of ribonucleotide incorporation. Nat Struct Mol Biol 22(3):185-91 PMID:25622295
    • SGD Paper
    • DOI full text
    • PMC full text
    • PubMed
  • Lujan SA, et al. (2014) Heterogeneous polymerase fidelity and mismatch repair bias genome variation and composition. Genome Res 24(11):1751-64 PMID:25217194
    • SGD Paper
    • DOI full text
    • PMC full text
    • PubMed
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