Phenotype annotations for a gene are curated single mutant phenotypes that require an observable (e.g., "cell shape"), a qualifier (e.g., "abnormal"), a mutant type (e.g., null), strain background, and a reference. In addition, annotations are classified as classical genetics or high-throughput (e.g., large scale survey, systematic mutation set). Whenever possible, allele information and additional details are provided.
6 entries for 6 phenotypesIncrease the total number of rows showing on this page using the pull-down located below the table, or use the page scroll at the table's top right to browse through the table's pages; use the arrows to the right of a column header to sort by that column; filter the table using the "Filter" box at the top of the table; click on the small "i" buttons located within a cell for an annotation to view further details.
| Gene | Phenotype | Experiment Type | Mutant Information | Strain Background | Chemical | Details | Reference |
|---|---|---|---|---|---|---|---|
| YGR025W | competitive fitness: increased | competitive growth fitness profiling using complete deletion alleles | null Allele: ygr025w-Δ | S288C | Media: minimal medium Details: Relative fitness score: 1.031 | Breslow DK, et al. (2008) PMID:18622397 | |
| YGR025W | metal resistance: increased | systematic mutation set | null Allele: ygr025w-Δ | S288C | 3.9 mM gadolinium(3+) | Treatment: gadolinium (III) chloride hexahydrate, 3.9 mM Details: high resistance; confirmed by serial dilution spot assays on 4.0 mM Gd | Grosjean N, et al. (2023) PMID:37630673 |
| YGR025W | resistance to chemicals: increased | systematic mutation set | null Allele: ygr025w-Δ | S288C | 250 ug/ml; synthetic cyclic depsipeptide related to natural kahalalides elisidepsin | Herrero AB, et al. (2008) PMID:19047157 | |
| YGR025W | utilization of carbon source: decreased rate | systematic mutation set prototrophic version of yeast deletion collection | null Allele: ygr025w-Δ | S288C | galactose | VanderSluis B, et al. (2014) PMID:24721214 | |
| YGR025W | vacuolar morphology: abnormal | systematic mutation set screen all non-essential genes for inability to fragment vacuoles in response to salt addition | null Allele: ygr025w-Δ | S288C | 0.4 M sodium chloride | Details: small defect in vacuolar fragmentation | Michaillat L and Mayer A (2013) PMID:23383298 |
| YGR025W | viable | systematic mutation set | null Allele: ygr025w-Δ | S288C | Giaever G, et al. (2002) PMID:12140549 |
This diagram displays up to the top 30 positive interactions (green), negative interactions (orange), and phenotypes (blue) that are shared between the given allele (black) and other alleles (purple). The shared interactions or phenotypes can be visualized separately using the radio button at the bottom of the graph.
DNASU Plasmids | PlasmID | Thermo Scientific | YGRC
dHITS | FitDB | HIPHOP Chemogenomics | HIP HOP Profiles | MetaboGeneCard | PROPHECY | SCMD | ScreenTroll | TheCellVision | Yeast Phenome
CYC2008 | GeneMANIA | IMP | ModelArchive | TheCellMap