Primary Literature
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- Kupkova K, et al. (2024) Genome-scale chromatin binding dynamics of RNA Polymerase II general transcription machinery components. EMBO J. PMID: 38565951
- Schilbach S, et al. (2023) Yeast PIC-Mediator structure with RNA polymerase II C-terminal domain. Proc Natl Acad Sci U S A 120(15):e2220542120 PMID: 37014863
- Ben-Shem A, et al. (2021) Architecture of the multi-functional SAGA complex and the molecular mechanism of holding TBP. FEBS J 288(10):3135-3147 PMID: 32946670
- Wang H, et al. (2021) Structures and implications of TBP-nucleosome complexes. Proc Natl Acad Sci U S A 118(30) PMID: 34301908
- Fujiwara R and Murakami K (2019) In vitro reconstitution of yeast RNA polymerase II transcription initiation with high efficiency. Methods 159-160:82-89 PMID: 30905750
- Fujiwara R, et al. (2019) The capping enzyme facilitates promoter escape and assembly of a follow-on preinitiation complex for reinitiation. Proc Natl Acad Sci U S A 116(45):22573-22582 PMID: 31591205
- Kasahara K, et al. (2019) Transcriptional activation is weakened when Taf1p N-terminal domain 1 is substituted with its Drosophila counterpart in yeast TFIID. Genes Genet Syst 94(1):51-59 PMID: 30905891
- Adachi N, et al. (2017) Improved method for soluble expression and rapid purification of yeast TFIIA. Protein Expr Purif 133:50-56 PMID: 28259734
- Hantsche M and Cramer P (2017) Conserved RNA polymerase II initiation complex structure. Curr Opin Struct Biol 47:17-22 PMID: 28437704
- Plaschka C, et al. (2016) Transcription initiation complex structures elucidate DNA opening. Nature 533(7603):353-8 PMID: 27193681
- Kandiah E, et al. (2014) More pieces to the puzzle: recent structural insights into class II transcription initiation. Curr Opin Struct Biol 24:91-7 PMID: 24440461
- Anandapadamanaban M, et al. (2013) High-resolution structure of TBP with TAF1 reveals anchoring patterns in transcriptional regulation. Nat Struct Mol Biol 20(8):1008-14 PMID: 23851461
- Durand A, et al. (2013) Structure, assembly and dynamics of macromolecular complexes by single particle cryo-electron microscopy. J Nanobiotechnology 11 Suppl 1(Suppl 1):S4 PMID: 24565374
- Layer JH and Weil PA (2013) Direct TFIIA-TFIID protein contacts drive budding yeast ribosomal protein gene transcription. J Biol Chem 288(32):23273-94 PMID: 23814059
- Poss ZC, et al. (2013) The Mediator complex and transcription regulation. Crit Rev Biochem Mol Biol 48(6):575-608 PMID: 24088064
- Rhee HS and Pugh BF (2012) Genome-wide structure and organization of eukaryotic pre-initiation complexes. Nature 483(7389):295-301 PMID: 22258509
- Papai G, et al. (2010) TFIIA and the transactivator Rap1 cooperate to commit TFIID for transcription initiation. Nature 465(7300):956-60 PMID: 20559389
- Ahn SH, et al. (2009) Ctk1 promotes dissociation of basal transcription factors from elongating RNA polymerase II. EMBO J 28(3):205-12 PMID: 19131970
- Peiró-Chova L and Estruch F (2009) The yeast RNA polymerase II-associated factor Iwr1p is involved in the basal and regulated transcription of specific genes. J Biol Chem 284(42):28958-67 PMID: 19679657
- Venters BJ and Pugh BF (2009) A canonical promoter organization of the transcription machinery and its regulators in the Saccharomyces genome. Genome Res 19(3):360-71 PMID: 19124666
- Kasahara K, et al. (2008) Saccharomyces cerevisiae HMO1 interacts with TFIID and participates in start site selection by RNA polymerase II. Nucleic Acids Res 36(4):1343-57 PMID: 18187511
- Mohibullah N and Hahn S (2008) Site-specific cross-linking of TBP in vivo and in vitro reveals a direct functional interaction with the SAGA subunit Spt3. Genes Dev 22(21):2994-3006 PMID: 18981477
- Biswas D, et al. (2007) Chd1 and yFACT act in opposition in regulating transcription. Mol Cell Biol 27(18):6279-87 PMID: 17620414
- Høiby T, et al. (2007) A facelift for the general transcription factor TFIIA. Biochim Biophys Acta 1769(7-8):429-36 PMID: 17560669
- Shi H, et al. (2007) RNA aptamers directed to discrete functional sites on a single protein structural domain. Proc Natl Acad Sci U S A 104(10):3742-6 PMID: 17360423
- Biswas D, et al. (2006) Genetic interactions between Nhp6 and Gcn5 with Mot1 and the Ccr4-Not complex that regulate binding of TATA-binding protein in Saccharomyces cerevisiae. Genetics 172(2):837-49 PMID: 16272410
- Biswas D, et al. (2006) Opposing roles for Set2 and yFACT in regulating TBP binding at promoters. EMBO J 25(19):4479-89 PMID: 16977311
- Kraemer SM, et al. (2006) TFIIA plays a role in the response to oxidative stress. Eukaryot Cell 5(7):1081-90 PMID: 16835452
- Zanton SJ and Pugh BF (2006) Full and partial genome-wide assembly and disassembly of the yeast transcription machinery in response to heat shock. Genes Dev 20(16):2250-65 PMID: 16912275
- Biswas D, et al. (2005) The yeast FACT complex has a role in transcriptional initiation. Mol Cell Biol 25(14):5812-22 PMID: 15987999
- Robinson MM, et al. (2005) Mapping and functional characterization of the TAF11 interaction with TFIIA. Mol Cell Biol 25(3):945-57 PMID: 15657423
- Auty R, et al. (2004) Purification of active TFIID from Saccharomyces cerevisiae. Extensive promoter contacts and co-activator function. J Biol Chem 279(48):49973-81 PMID: 15448131
- Biswas D, et al. (2004) Role for Nhp6, Gcn5, and the Swi/Snf complex in stimulating formation of the TATA-binding protein-TFIIA-DNA complex. Mol Cell Biol 24(18):8312-21 PMID: 15340090
- Eriksson P, et al. (2004) TATA-binding protein mutants that are lethal in the absence of the Nhp6 high-mobility-group protein. Mol Cell Biol 24(14):6419-29 PMID: 15226442
- Fan X, et al. (2004) Probing TBP interactions in transcription initiation and reinitiation with RNA aptamers that act in distinct modes. Proc Natl Acad Sci U S A 101(18):6934-9 PMID: 15103022
- Geisberg JV and Struhl K (2004) Cellular stress alters the transcriptional properties of promoter-bound Mot1-TBP complexes. Mol Cell 14(4):479-89 PMID: 15149597
- Tamayo E, et al. (2004) Mediator is required for activated transcription in a Schizosaccharomyces pombe in vitro system. Eur J Biochem 271(12):2561-72 PMID: 15182371
- Warfield L, et al. (2004) Positive and negative functions of the SAGA complex mediated through interaction of Spt8 with TBP and the N-terminal domain of TFIIA. Genes Dev 18(9):1022-34 PMID: 15132995
- Bleichenbacher M, et al. (2003) Novel interactions between the components of human and yeast TFIIA/TBP/DNA complexes. J Mol Biol 332(4):783-93 PMID: 12972251
- Upadhyaya AB and DeJong J (2003) Expression of human TFIIA subunits in Saccharomyces cerevisiae identifies regions with conserved and species-specific functions. Biochim Biophys Acta 1625(1):88-97 PMID: 12527429
- Yu Y, et al. (2003) Regulation of TATA-binding protein binding by the SAGA complex and the Nhp6 high-mobility group protein. Mol Cell Biol 23(6):1910-21 PMID: 12612066
- Cang Y and Prelich G (2002) Direct stimulation of transcription by negative cofactor 2 (NC2) through TATA-binding protein (TBP). Proc Natl Acad Sci U S A 99(20):12727-32 PMID: 12237409
- Kraemer SM, et al. (2001) TFIIA interacts with TFIID via association with TATA-binding protein and TAF40. Mol Cell Biol 21(5):1737-46 PMID: 11238911
- Lee M and Struhl K (2001) Multiple functions of the nonconserved N-terminal domain of yeast TATA-binding protein. Genetics 158(1):87-93 PMID: 11333220
- Solow S, et al. (2001) Taf(II) 250 phosphorylates human transcription factor IIA on serine residues important for TBP binding and transcription activity. J Biol Chem 276(19):15886-92 PMID: 11278496
- Stewart JJ and Stargell LA (2001) The stability of the TFIIA-TBP-DNA complex is dependent on the sequence of the TATAAA element. J Biol Chem 276(32):30078-84 PMID: 11402056
- Virbasius CM, et al. (2001) Promoter-specific activation defects by a novel yeast TBP mutant compromised for TFIIB interaction. Curr Biol 11(22):1794-8 PMID: 11719223
- Wang SM, et al. (2001) Structural studies of a yeast quaternary transcription-initiation complex. Acta Crystallogr D Biol Crystallogr 57(Pt 3):441-4 PMID: 11223526
- Bagby S, et al. (2000) TFIIA-TAF regulatory interplay: NMR evidence for overlapping binding sites on TBP. FEBS Lett 468(2-3):149-54 PMID: 10692576
- Kays AR and Schepartz A (2000) Virtually unidirectional binding of TBP to the AdMLP TATA box within the quaternary complex with TFIIA and TFIIB. Chem Biol 7(8):601-10 PMID: 11048951
- Kuras L, et al. (2000) TAF-Containing and TAF-independent forms of transcriptionally active TBP in vivo. Science 288(5469):1244-8 PMID: 10818000
- Lemaire M, et al. (2000) The NC2 repressor is dispensable in yeast mutated for the Sin4p component of the holoenzyme and plays roles similar to Mot1p in vivo. Mol Microbiol 36(1):163-73 PMID: 10760173
- Ozer J, et al. (2000) A testis-specific transcription factor IIA (TFIIAtau) stimulates TATA-binding protein-DNA binding and transcription activation. J Biol Chem 275(1):122-8 PMID: 10617594
- Stargell LA, et al. (2000) TFIIA has activator-dependent and core promoter functions in vivo. J Biol Chem 275(17):12374-80 PMID: 10777519
- Xie J, et al. (2000) A single point mutation in TFIIA suppresses NC2 requirement in vivo. EMBO J 19(4):672-82 PMID: 10675336
- Yudkovsky N, et al. (2000) A transcription reinitiation intermediate that is stabilized by activator. Nature 408(6809):225-9 PMID: 11089979
- Chou S, et al. (1999) Transcriptional activation in yeast cells lacking transcription factor IIA. Genetics 153(4):1573-81 PMID: 10581267
- Coleman RA, et al. (1999) TFIIA regulates TBP and TFIID dimers. Mol Cell 4(3):451-7 PMID: 10518227
- Liu Q, et al. (1999) Analysis of TFIIA function In vivo: evidence for a role in TATA-binding protein recruitment and gene-specific activation. Mol Cell Biol 19(12):8673-85 PMID: 10567590
- Li YF, et al. (1999) Characterization and functional analysis of Arabidopsis TFIIA reveal that the evolutionarily unconserved region of the large subunit has a transcription activation domain. Plant Mol Biol 39(3):515-25 PMID: 10092179
- Ranish JA, et al. (1999) Intermediates in formation and activity of the RNA polymerase II preinitiation complex: holoenzyme recruitment and a postrecruitment role for the TATA box and TFIIB. Genes Dev 13(1):49-63 PMID: 9887099
- Solow SP, et al. (1999) Phosphorylation of TFIIA stimulates TATA binding protein-TATA interaction and contributes to maximal transcription and viability in yeast. Mol Cell Biol 19(4):2846-52 PMID: 10082550
- Titov AA and Blobel G (1999) The karyopherin Kap122p/Pdr6p imports both subunits of the transcription factor IIA into the nucleus. J Cell Biol 147(2):235-46 PMID: 10525531
- Chicca JJ, et al. (1998) Cloning and biochemical characterization of TAF-172, a human homolog of yeast Mot1. Mol Cell Biol 18(3):1701-10 PMID: 9488487
- Colbert T, et al. (1998) Architecture of protein and DNA contacts within the TFIIIB-DNA complex. Mol Cell Biol 18(3):1682-91 PMID: 9488485
- Kokubo T, et al. (1998) The yeast TAF145 inhibitory domain and TFIIA competitively bind to TATA-binding protein. Mol Cell Biol 18(2):1003-12 PMID: 9447997
- Ozer J, et al. (1998) Association of transcription factor IIA with TATA binding protein is required for transcriptional activation of a subset of promoters and cell cycle progression in Saccharomyces cerevisiae. Mol Cell Biol 18(5):2559-70 PMID: 9566876
- Cox JM, et al. (1997) Bidirectional binding of the TATA box binding protein to the TATA box. Proc Natl Acad Sci U S A 94(25):13475-80 PMID: 9391050
- Hori R and Carey M (1997) Protease footprinting analysis of ternary complex formation by human TFIIA. J Biol Chem 272(2):1180-7 PMID: 8995419
- Kurumizaka H and Wolffe AP (1997) Sin mutations of histone H3: influence on nucleosome core structure and function. Mol Cell Biol 17(12):6953-69 PMID: 9372928
- Lee M and Struhl K (1997) A severely defective TATA-binding protein-TFIIB interaction does not preclude transcriptional activation in vivo. Mol Cell Biol 17(3):1336-45 PMID: 9032260
- Madison JM and Winston F (1997) Evidence that Spt3 functionally interacts with Mot1, TFIIA, and TATA-binding protein to confer promoter-specific transcriptional control in Saccharomyces cerevisiae. Mol Cell Biol 17(1):287-95 PMID: 8972209
- Geiger JH, et al. (1996) Crystal structure of the yeast TFIIA/TBP/DNA complex. Science 272(5263):830-6 PMID: 8629014
- Lagrange T, et al. (1996) High-resolution mapping of nucleoprotein complexes by site-specific protein-DNA photocrosslinking: organization of the human TBP-TFIIA-TFIIB-DNA quaternary complex. Proc Natl Acad Sci U S A 93(20):10620-5 PMID: 8855228
- Ozer J, et al. (1996) Transcription factor IIA mutations show activator-specific defects and reveal a IIA function distinct from stimulation of TBP-DNA binding. J Biol Chem 271(19):11182-90 PMID: 8626665
- Paull TT, et al. (1996) Yeast HMG proteins NHP6A/B potentiate promoter-specific transcriptional activation in vivo and assembly of preinitiation complexes in vitro. Genes Dev 10(21):2769-81 PMID: 8946917
- Roberts S, et al. (1996) Cloning and functional characterization of the gene encoding the TFIIIB90 subunit of RNA polymerase III transcription factor TFIIIB. J Biol Chem 271(25):14903-9 PMID: 8662956
- Stargell LA and Struhl K (1996) A new class of activation-defective TATA-binding protein mutants: evidence for two steps of transcriptional activation in vivo. Mol Cell Biol 16(8):4456-64 PMID: 8754846
- Tan S, et al. (1996) Crystal structure of a yeast TFIIA/TBP/DNA complex. Nature 381(6578):127-51 PMID: 8610010
- Bellorini M, et al. (1995) Distamycin A and tallimustine inhibit TBP binding and basal in vitro transcription. Nucleic Acids Res 23(10):1657-63 PMID: 7784168
- Kang JJ, et al. (1995) Analysis of the yeast transcription factor TFIIA: distinct functional regions and a polymerase II-specific role in basal and activated transcription. Mol Cell Biol 15(3):1234-43 PMID: 7862117
- Kim TK, et al. (1995) TATA-binding protein residues implicated in a functional interplay between negative cofactor NC2 (Dr1) and general factors TFIIA and TFIIB. J Biol Chem 270(18):10976-81 PMID: 7738039
- Stargell LA and Struhl K (1995) The TBP-TFIIA interaction in the response to acidic activators in vivo. Science 269(5220):75-8 PMID: 7604282
- Bernstein R, et al. (1994) Characterization of the highly conserved TFIIA small subunit from Drosophila melanogaster. J Biol Chem 269(39):24361-6 PMID: 7929095
- Imbalzano AN, et al. (1994) Transcription factor (TF) IIB and TFIIA can independently increase the affinity of the TATA-binding protein for DNA. J Biol Chem 269(11):8280-6 PMID: 8132551
- Ozer J, et al. (1994) Molecular cloning of the small (gamma) subunit of human TFIIA reveals functions critical for activated transcription. Genes Dev 8(19):2324-35 PMID: 7958899
- Rasmussen SW (1994) Sequence of a 28.6 kb region of yeast chromosome XI includes the FBA1 and TOA2 genes, an open reading frame (ORF) similar to a translationally controlled tumour protein, one ORF containing motifs also found in plant storage proteins and 13 ORFs with weak or no homology to known proteins. Yeast 10 Suppl A:S63-8 PMID: 8091862
- Auble DT and Hahn S (1993) An ATP-dependent inhibitor of TBP binding to DNA. Genes Dev 7(5):844-56 PMID: 8491381
- DeJong J and Roeder RG (1993) A single cDNA, hTFIIA/alpha, encodes both the p35 and p19 subunits of human TFIIA. Genes Dev 7(11):2220-34 PMID: 8224848
- Karlin S (1993) Unusual charge configurations in transcription factors of the basic RNA polymerase II initiation complex. Proc Natl Acad Sci U S A 90(12):5593-7 PMID: 8516305
- Liljelund P, et al. (1993) Altered promoter binding of the TATA box-binding factor induced by the transcriptional activation domain of VP16 and suppressed by TFIIA. Mol Gen Genet 241(5-6):694-9 PMID: 8264543
- Meissner W, et al. (1993) Transcription factor IIA stimulates the expression of classical polIII-genes. Nucleic Acids Res 21(4):1013-8 PMID: 8451168
- Cortes P, et al. (1992) Factors involved in specific transcription by mammalian RNA polymerase II: purification and analysis of transcription factor IIA and identification of transcription factor IIJ. Mol Cell Biol 12(1):413-21 PMID: 1729613
- Coulombe B, et al. (1992) Identification of three mammalian proteins that bind to the yeast TATA box protein TFIID. Gene Expr 2(2):99-110 PMID: 1633441
- Lee DK, et al. (1992) TFIIA induces conformational changes in TFIID via interactions with the basic repeat. Mol Cell Biol 12(11):5189-96 PMID: 1406690
- Ranish JA, et al. (1992) Isolation of two genes that encode subunits of the yeast transcription factor IIA. Science 255(5048):1127-9 PMID: 1546313
- Sayre MH, et al. (1992) Reconstitution of transcription with five purified initiation factors and RNA polymerase II from Saccharomyces cerevisiae. J Biol Chem 267(32):23376-82 PMID: 1331084
- Meisterernst M and Roeder RG (1991) Family of proteins that interact with TFIID and regulate promoter activity. Cell 67(3):557-67 PMID: 1934060
- Ranish JA and Hahn S (1991) The yeast general transcription factor TFIIA is composed of two polypeptide subunits. J Biol Chem 266(29):19320-7 PMID: 1918049
- Usuda Y, et al. (1991) Affinity purification of transcription factor IIA from HeLa cell nuclear extracts. EMBO J 10(8):2305-10 PMID: 2065666
- Maldonado E, et al. (1990) Factors involved in specific transcription by mammalian RNA polymerase II: role of transcription factors IIA, IID, and IIB during formation of a transcription-competent complex. Mol Cell Biol 10(12):6335-47 PMID: 2247058
- Buratowski S, et al. (1989) Five intermediate complexes in transcription initiation by RNA polymerase II. Cell 56(4):549-61 PMID: 2917366
- Hahn S, et al. (1989) Isolation of the gene encoding the yeast TATA binding protein TFIID: a gene identical to the SPT15 suppressor of Ty element insertions. Cell 58(6):1173-81 PMID: 2550146
- Hahn S, et al. (1989) Identification of a yeast protein homologous in function to the mammalian general transcription factor, TFIIA. EMBO J 8(11):3379-82 PMID: 2684641