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    Literature Recently Added to SGD


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    • Yan G, et al. (2025) Argonaute-driven programmable multi-enzyme complex assembly on ribosomal RNA scaffolds. Int J Biol Macromol 143974 PMID: 40334882
      • SGD Paper
      • DOI full text
      • PubMed
    • Zhu Y, et al. (2025) Beyond CEN.PK - parallel engineering of selected S. cerevisiae strains reveals that superior chassis strains require different engineering approaches for limonene production. Metab Eng PMID: 40334774
      • SGD Paper
      • DOI full text
      • PubMed
      2 Associated Entities: ERG20 | erg20-F96W,N127W ... Show all Show fewer

    • Maya-Miles D, et al. (2025) Regulation of transcription elongation anticipates alternative gene expression strategies across the cell cycle. PLoS One 20(5):e0317650 PMID: 40333925
      • SGD Paper
      • DOI full text
      • PubMed
    • Danyo EK, et al. (2025) The impact of pre-radiation exposure on physiological and fermentation activity of <i>Saccharomyces cerevisiae</i> SAF Ale S-33. Int J Radiat Biol 1-9 PMID: 40333000
      • SGD Paper
      • DOI full text
      • PubMed
    • Capaci V, et al. (2025) Uncovering a Novel Pathogenic Mechanism of <i>BCS1L</i> in Mitochondrial Disorders: Insights from Functional Studies on the c.38A>G Variant. Int J Mol Sci 26(8) PMID: 40332224
      • SGD Paper
      • DOI full text
      • PubMed
      2 Associated Entities: BCS1 | bcs1-N49S ... Show all Show fewer

    • Zhang F, et al. (2025) The Yeast Gsk-3 Kinase Mck1 Is Necessary for Cell Wall Remodeling in Glucose-Starved and Cell Wall-Stressed Cells. Int J Mol Sci 26(8) PMID: 40332024
      • SGD Paper
      • DOI full text
      • PubMed
      7 Associated Entities: ADR1 | GCN5 | CAT8 | MSN4 | SNF1 | MSN2 | MCK1 ... Show all Show fewer

    • Tarakhovskaya ER, et al. (2025) Vulnerable Nucleotide Pools and Genomic Instability in Yeast Strains with Deletion of the <i>ADE12</i> Gene Encoding for Adenylosuccinate Synthetase. Int J Mol Sci 26(8) PMID: 40331943
      • SGD Paper
      • DOI full text
      • PubMed
      1 Associated Entity: ADE12 ... Show all Show fewer

    • Seong MJ, et al. (2025) Automated Construction of a Yeast-Based Multigene Library via Homologous Recombination in a Biofoundry Workflow. ACS Synth Biol PMID: 40331904
      • SGD Paper
      • DOI full text
      • PubMed
    • Yang C, et al. (2025) Effects of Patulin Stress on the Physiology, Fermentation Performance, and Aroma Profile of Saccharomyces cerevisiae During Fermentation. J Food Sci 90(5):e70248 PMID: 40331780
      • SGD Paper
      • DOI full text
      • PubMed
    • Jeon G, et al. (2025) Impact of Culture Duration on the Properties and Functionality of Yeast-Derived Extracellular Vesicles. Biomater Res 29:0201 PMID: 40330275
      • SGD Paper
      • DOI full text
      • PMC full text
      • PubMed
    • Yerlikaya O, et al. (2025) Impact of Yeast Types on Quality Characteristics and Storage Stability of Industrial Kefir. Food Sci Nutr 13(5):e70238 PMID: 40330201
      • SGD Paper
      • DOI full text
      • PMC full text
      • PubMed
    • Renganaath K and Albert FW (2025) Trans-eQTL hotspots shape complex traits by modulating cellular states. Cell Genom 100873 PMID: 40328252
      • SGD Paper
      • DOI full text
      • PubMed
    • Chapman H, et al. (2025) Algebraic differentiation for fast sensitivity analysis of optimal flux modes in metabolic models. Bioinformatics PMID: 40327453
      • SGD Paper
      • DOI full text
      • PubMed
    • Liu X, et al. (2025) Rational Design and Model Predictions for Optimized Elastase Production in <i>Saccharomyces cerevisiae</i>. ACS Synth Biol PMID: 40327375
      • SGD Paper
      • DOI full text
      • PubMed
      3 Associated Entities: TES1 | PEP1 | POS5 ... Show all Show fewer

    • Qu T, et al. (2025) Development of Freeze-Thaw Tolerant Yeast Strains via a Hybrid Fusion Evolutionary Strategy. J Agric Food Chem PMID: 40325858
      • SGD Paper
      • DOI full text
      • PubMed
      7 Associated Entities: AQY3 | STL1 | AQY2 | FPS1 | GUT2 | GUT1 | AQY1 ... Show all Show fewer

    • Ptak C, et al. (2025) Ulp1 association with nuclear pore complexes is required for the maintenance of global SUMOylation. Mol Biol Cell mbcE24120563 PMID: 40327319
      • SGD Paper
      • DOI full text
      • PubMed
      19 Associated Entities: UBC4 | MLP2 | MAD1 | NUP42 | MLP1 | NUP1 | KAP95 | SIZ1 | NUP60 | ... Show all ULP1 | NFI1 | cdc48-3 | ubc9-2 | rpt6-1 | ubc9-K153R,K157R | ulp1Δ1–150 | ulp1Δ150–340 | ulp1Δ1–340 | kap95-14 Show fewer

    • Kennedy T, et al. (2025) Deep learning-driven imaging of cell division and cell growth across an entire eukaryotic life cycle. Mol Biol Cell mbcE25010009 PMID: 40327364
      • SGD Paper
      • DOI full text
      • PubMed
      6 Associated Entities: CDC28 | CLN3 | VAC17 | WHI5 | SFP1 | CDH1 ... Show all Show fewer

    • Koide H, et al. (2025) Solution AFM imaging and coarse-grained molecular modeling of yeast condensin structural variation coupled to the ATP hydrolysis cycle. J Mol Biol 169185 PMID: 40324744
      • SGD Paper
      • DOI full text
      • PubMed
      3 Associated Entities: SMC2 | SMC4 | Nuclear condensin complex ... Show all Show fewer

    • Xia T, et al. (2025) Regulation of Arginine Metabolism and Ethanol Tolerance in <i>Saccharomyces cerevisiae</i> by <i>BTN2</i>. Food Sci Nutr 13(5):e70244 PMID: 40321608
      • SGD Paper
      • DOI full text
      • PMC full text
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      5 Associated Entities: GAP1 | CAN1 | DUR12 | CAR1 | BTN2 ... Show all Show fewer

    • Meister C, et al. (2025) Reversible association of ubiquitin with PCNA is important for template switching in S. cerevisiae. DNA Repair (Amst) 149:103842 PMID: 40319547
      • SGD Paper
      • DOI full text
      • PubMed
      2 Associated Entities: POL30 | UBI4 ... Show all Show fewer

    • Roy M, et al. (2025) EXO1 promotes the meiotic MLH1-MLH3 endonuclease through conserved interactions with MLH1, MSH4 and DNA. Nat Commun 16(1):4141 PMID: 40319035
      • SGD Paper
      • DOI full text
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      2 Associated Entities: EXO1 | exo1-D173A ... Show all Show fewer

    • Chen RR, et al. (2025) Identification of key transcription factors, including DAL80 and CRZ1, involved in heat and ethanol tolerance in Saccharomyces cerevisiae. Biotechnol Biofuels Bioprod 18(1):50 PMID: 40319324
      • SGD Paper
      • DOI full text
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      8 Associated Entities: OPI1 | TOS8 | UGA3 | DAL80 | MIG1 | CRZ1 | GIS1 | YAP1 ... Show all Show fewer

    • Thornton K, et al. (2025) rDNA copy number variation affects yeast fitness in response to different environments. Genetics PMID: 40317179
      • SGD Paper
      • DOI full text
      • PubMed
      13 Associated Entities: SSA1 | HSP12 | STR3 | PRP11 | HSC82 | STI1 | HSP82 | SIS1 | SSA2 | ... Show all HSP104 | RDN1 | RDN37-1 | RDN37-2 Show fewer

    • Tang Y, et al. (2025) The influencing mechanisms of different characteristics of polystyrene microplastics on <i>Saccharomyces cerevisiae</i>: functional group, particle size and dosage. Environ Technol 1-14 PMID: 40324336
      • SGD Paper
      • DOI full text
      • PubMed
    • Anh TTQ, et al. (2025) Characterization of Red Dragon Fruit Wine Fermented with a Newly Identified Yeast Strain <i>Saccharomyces cerevisiae</i> M7. Food Technol Biotechnol 63(1):4-13 PMID: 40322290
      • SGD Paper
      • DOI full text
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    • Stuke JFM and Hummer G (2025) AlphaFold2 SLiM screen for LC3-LIR interactions in autophagy. Autophagy 1-21 PMID: 40320752
      • SGD Paper
      • DOI full text
      • PubMed
      2 Associated Entities: NUP159 | ATG8 ... Show all Show fewer

    • Engelberg D, et al. (2025) The Saccharomyces cerevisiae ∑1278b strain is sensitive to NaCl because of mutations in its ENA1 gene. FEMS Yeast Res PMID: 40317084
      • SGD Paper
      • DOI full text
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      2 Associated Entities: ENA1 | ena1-F860S ... Show all Show fewer

    • Bianco E, et al. (2025) Stm1 regulates Ifh1 activity revealing crosstalk between ribosome biogenesis and ribosome dormancy. Mol Cell 85(9):1806-1823.e17 PMID: 40315826
      • SGD Paper
      • DOI full text
      • PubMed
      2 Associated Entities: IFH1 | STM1 ... Show all Show fewer

    • Vadlamudi BS and Aanen DK (2025) Can Unicellular Organisms Sequester a Germline? The Yeast-Germline Hypothesis. Bioessays e70003 PMID: 40317951
      • SGD Paper
      • DOI full text
      • PubMed
    • Ramasamy T, et al. (2025) Proteomic approach for evaluating cryoprotectant formulations for enhanced post-cryopreservation recovery of yeast. Sci Rep 15(1):15474 PMID: 40316578
      • SGD Paper
      • DOI full text
      • PubMed
    • Gupta A, et al. (2025) Accurate, scalable, and fully automated inference of species trees from raw genome assemblies using ROADIES. Proc Natl Acad Sci U S A 122(19):e2500553122 PMID: 40314967
      • SGD Paper
      • DOI full text
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    • Roumestand C, et al. (2025) Understanding the Relationship between Pressure and Temperature Unfolding of Proteins. JACS Au 5(4):1940-1955 PMID: 40313814
      • SGD Paper
      • DOI full text
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      1 Associated Entity: YFH1 ... Show all Show fewer

    • Harrison PM (2025) Robust phylogenetic profile clustering for <i>Saccharomyces cerevisiae</i> proteins. PeerJ 13:e19370 PMID: 40313378
      • SGD Paper
      • DOI full text
      • PMC full text
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    • Zhang L, et al. (2025) VAC14 oligomerization is essential for the function of the FAB1/PIKfyve-VAC14-FIG4 complex. Mol Biol Cell mbcE24110490 PMID: 40305106
      • SGD Paper
      • DOI full text
      • PubMed
      9 Associated Entities: FAB1 | VAC14 | FIG4 | PAS complex | vac14-R708H | vac14-R708E | vac14-R743E | vac14-M729E | vac14-L709D ... Show all Show fewer

    • Dai W, et al. (2025) PKA plays a conserved role in regulating gene expression and metabolic adaptation by phosphorylating Rpd3/HDAC1. Nat Commun 16(1):4030 PMID: 40301306
      • SGD Paper
      • DOI full text
      • PMC full text
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      4 Associated Entities: ASH1 | NGG1 | RPD3 | TPK2 ... Show all Show fewer

    • Bosch-Crespo DM, et al. (2025) Wine pH could affect the interaction between yeast mannoproteins and flavanolic compounds. J Sci Food Agric PMID: 40312837
      • SGD Paper
      • DOI full text
      • PubMed
    • Denkiewicz-Kruk M, et al. (2025) Effects of CDC45 mutations on DNA replication and genome stability. Biochim Biophys Acta Mol Cell Res 1872(5):119936 PMID: 40139510
      • SGD Paper
      • DOI full text
      • PubMed
      11 Associated Entities: RFA1 | RAD51 | RAD52 | MSH2 | REV3 | DDC1 | CDC45 | cdc45-1 | cdc45-26 | ... Show all cdc45-25 | cdc45-S242P Show fewer

    • Fenech EJ, et al. (2025) Profiling the LAM Family of Contact Site Tethers Provides Insights into Their Regulation and Function. Contact (Thousand Oaks) 8:25152564251321770 PMID: 40291949
      • SGD Paper
      • DOI full text
      • PMC full text
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      6 Associated Entities: LAM5 | LAM1 | LAM4 | LAM6 | SIP3 | YSP2 ... Show all Show fewer

    • Casler JC, et al. (2025) Mitochondria-Plasma Membrane Contact Sites: Emerging Regulators of Mitochondrial Form and Function. Contact (Thousand Oaks) 8:25152564251332141 PMID: 40291948
      • SGD Paper
      • DOI full text
      • PMC full text
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      2 Associated Entities: NUM1 | DNM1 ... Show all Show fewer

    • Faz-Cortez OA, et al. (2025) Computational analysis of polymorphic residues in maltose and maltotriose transporters of a wild <i>Saccharomyces cerevisiae</i> strain. Open Life Sci 20(1):20251080 PMID: 40291777
      • SGD Paper
      • DOI full text
      • PMC full text
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      5 Associated Entities: MAL11 | MAL31 | MPH2 | MPH3 | MAL61 ... Show all Show fewer

    • Dudziak A, et al. (2025) The Spc105/Kre28 complex promotes mitotic error correction by outer kinetochore recruitment of Ipl1/Sli15. EMBO J PMID: 40281358
      • SGD Paper
      • DOI full text
      • PubMed
      5 Associated Entities: SPC105 | SLI15 | KRE28 | IPL1 | Spc105 complex ... Show all Show fewer

    • Jiang T, et al. (2024) Amplified and distinctive genotoxicity of titanium dioxide nanoparticles in transformed yeast reporters with human cytochrome P450 (CYP) genes. J Hazard Mater 474: 134850. PMID: 38850947
      • SGD Paper
      • DOI full text
      • PMC full text
      • PubMed
    • Song JZ, et al. (2025) Recruitment of Atg1 to the phagophore by Atg8 orchestrates autophagy machineries. Nat Struct Mol Biol PMID: 40295771
      • SGD Paper
      • DOI full text
      • PubMed
      2 Associated Entities: ATG1 | ATG8 ... Show all Show fewer

    • Sun Q, et al. (2025) Unraveling Time-Resolved Transcriptional and Metabolic Shifts in the Mixed Fermentation of <i><i>Saccharomyces cerevisiae</i></i> and <i>Hanseniaspora uvarum</i>. J Agric Food Chem PMID: 40310988
      • SGD Paper
      • DOI full text
      • PubMed
    • Herring P, et al. (2025) A cellular system to study responses to a collision between the transcription complex and a protein-bound nick in the DNA template. FEBS Lett PMID: 40309784
      • SGD Paper
      • DOI full text
      • PubMed
      4 Associated Entities: FLP1 | ELC1 | DNA-directed RNA polymerase II complex | flp1-H305L ... Show all Show fewer

    • Andrews SS and Brent R (2025) Individual yeast cells signal at different levels but each with good precision. R Soc Open Sci 12(4):241025 PMID: 40309186
      • SGD Paper
      • DOI full text
      • PMC full text
      • PubMed
    • Arora L, et al. (2025) Chaperone-Mediated Heterotypic Phase Separation Prevents the Amyloid Formation of the Pathological Y145Stop Prion Protein Variant. J Mol Biol 437(5):168955 PMID: 39826709
      • SGD Paper
      • DOI full text
      • PubMed
      1 Associated Entity: YDJ1 ... Show all Show fewer

    • Dennler O and Ryan CJ (2025) Evaluating sequence and structural similarity metrics for predicting shared paralog functions. NAR Genom Bioinform 7(2):lqaf051 PMID: 40290317
      • SGD Paper
      • DOI full text
      • PMC full text
      • PubMed
    • Sonawala U, et al. (2025) Characterization and whole genome sequencing of Saccharomyces cerevisiae strains lacking several amino acid transporters: Tools for studying amino acid transport. PLoS One 20(4):e0315789 PMID: 40305508
      • SGD Paper
      • DOI full text
      • PMC full text
      • PubMed
      5 Associated Entities: AGP3 | BAP2 | TAT1 | BAP3 | TAT2 ... Show all Show fewer

    • Miloshev G, et al. (2025) Linker Histones Maintain Genome Stability and Drive the Process of Cellular Ageing. Front Biosci (Landmark Ed) 30(4):26823 PMID: 40302323
      • SGD Paper
      • DOI full text
      • PubMed
      1 Associated Entity: HHO1 ... Show all Show fewer

    • Wu Y, et al. (2025) Robust Saccharomyces cerevisiae by rational metabolic engineering for effective ethanol production from undetoxified steam-exploded corn stover hydrolysate. Bioresour Technol 132605 PMID: 40306336
      • SGD Paper
      • DOI full text
      • PubMed
      9 Associated Entities: ZWF1 | SOD1 | CTT1 | GSH1 | CTA1 | PRX1 | GND2 | GLR1 | GSH2 ... Show all Show fewer

    • Yang J, et al. (2025) De Novo Production of Piceatannol via Construction of Interconnected Biosynthetic Pathways in a Single <i>Saccharomyces cerevisiae</i> Strain. J Agric Food Chem PMID: 40305414
      • SGD Paper
      • DOI full text
      • PubMed
      17 Associated Entities: ARO8 | RIB1 | ARO3 | ARO10 | FLX1 | ALD6 | ACC1 | PHA2 | ADH2 | ... Show all ARO1 | TYR1 | ARO7 | MCH5 | ARO4 | aro4-K229L | aro7-G141S | acc1-S659A,S1157A Show fewer

    • Folger A, et al. (2025) Regulation of misfolded protein aggregation and degradation by SUMOylation in budding yeast. Mol Biol Cell mbcE24120540 PMID: 40305096
      • SGD Paper
      • DOI full text
      • PubMed
      7 Associated Entities: SMT3 | SLX5 | UBC9 | UFD1 | ULP1 | smt3-allR | ubc9-10 ... Show all Show fewer

    • Nonaka K, et al. (2025) Snf1 and yeast GSK3-β activates Tda1 to suppress glucose starvation signaling. EMBO Rep PMID: 40275108
      • SGD Paper
      • DOI full text
      • PubMed
      4 Associated Entities: HXK2 | TDA1 | SNF1 | RIM11 ... Show all Show fewer

    • Mohanan G, et al. (2025) Genotoxic stress triggers Scd6-dependent regulation of translation to modulate the DNA damage response. EMBO Rep PMID: 40275106
      • SGD Paper
      • DOI full text
      • PubMed
      2 Associated Entities: SRS2 | SCD6 ... Show all Show fewer

    • Mitra S and Hartemink AJ (2025) Inferring differential protein binding from time-series chromatin accessibility data. Bioinform Adv 5(1):vbaf080 PMID: 40297777
      • SGD Paper
      • DOI full text
      • PMC full text
      • PubMed
    • Minami A, et al. (2025) The ribonuclease RNase T2 mediates selective autophagy of ribosomes induced by starvation in Saccharomyces cerevisiae. J Biol Chem 108554 PMID: 40294649
      • SGD Paper
      • DOI full text
      • PubMed
      3 Associated Entities: ATG8 | RNY1 | RSA1 ... Show all Show fewer

    • Xie P (2025) Modeling Study of Effects of Tubulin Carboxy-Terminal Tails on Dynamics of Kinesin and Dynein Motors. Protein J PMID: 40281262
      • SGD Paper
      • DOI full text
      • PubMed
      2 Associated Entities: DYN2 | PAC11 ... Show all Show fewer

    • Almyre C, et al. (2025) The copper ionophore disulfiram improves mitochondrial function in various yeast and human cellular models of mitochondrial diseases. Hum Mol Genet PMID: 40298238
      • SGD Paper
      • DOI full text
      • PubMed
      12 Associated Entities: FMC1 | SHY1 | BSC1 | COX2 | TAZ1 | SYM1 | MIP1 | Mitochondrial respiratory chain complex IV, COX5A variant | Mitochondrial respiratory chain complex IV, COX5B variant | ... Show all bcs1-F401I | mip1-G651S | shy1-G137R Show fewer

    • Nguyen SA, et al. (2025) Regulation of pericentromeric DNA loop size via Scc2-cohesin interaction. iScience 28(5):112322 PMID: 40271018
      • SGD Paper
      • DOI full text
      • PMC full text
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      3 Associated Entities: SCC2 | RAD61 | ECO1 ... Show all Show fewer

    • Su C, et al. (2025) Comparative adaptability of 307 <i>Saccharomyces cerevisiae</i> strains from winemaking and Mantou fermentation. Front Microbiol 16:1581370 PMID: 40291801
      • SGD Paper
      • DOI full text
      • PMC full text
      • PubMed
    • Zu C, et al. (2025) A Miniaturized Percoll Gradient Method for Isolation of Quiescent Cells of Yeast. Bio Protoc 15(8):e5279 PMID: 40291419
      • SGD Paper
      • DOI full text
      • PMC full text
      • PubMed
    • Chen M, et al. (2025) Allosteric Effectors Outcompete Transcript Levels and Substrate Concentration in Regulating Central Carbon Flux During the Crabtree Effect Transition. Biotechnol J 20(4):e70024 PMID: 40289311
      • SGD Paper
      • DOI full text
      • PubMed
    • Neto VG, et al. (2025) New Insights into nuclear import and nucleolar localization of yeast RNA exosome subunits. Mol Biol Cell mbcE25020078 PMID: 40266794
      • SGD Paper
      • DOI full text
      • PubMed
      8 Associated Entities: RRP43 | MTR4 | RRP4 | DIS3 | NOP53 | SKI7 | SRP1 | KAP95 ... Show all Show fewer

    • Kwun MS and Lee DG (2025) Ferroptosis-Like Death Induction in <i>Saccharomyces cerevisiae</i> by Gold Nanoparticles. J Microbiol Biotechnol 35:e2501029 PMID: 40295204
      • SGD Paper
      • DOI full text
      • PubMed
    • Chen Z, et al. (2025) A systematic study of regulating inorganic polyphosphates production in <i>Saccharomyces cerevisiae</i>. Synth Syst Biotechnol 10(3):816-826 PMID: 40291979
      • SGD Paper
      • DOI full text
      • PMC full text
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      16 Associated Entities: CCR4 | KCS1 | ECM14 | VTC4 | VMA22 | VMA2 | VMA3 | ECM33 | VTC1 | ... Show all VPH2 | PPN1 | VMA5 | PHO85 | PPN2 | DDP1 | VIP1 Show fewer

    • Tadesse T, et al. (2025) Diversity, Distribution, and Phenotypic Characterization of Cultivable Wild Yeasts Isolated from Natural Forest. F1000Res 14:105 PMID: 40291468
      • SGD Paper
      • DOI full text
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      • PubMed
    • Blums K, et al. (2025) Automation of RNA-Seq Sample Preparation and Miniaturized Parallel Bioreactors Enable High-Throughput Differential Gene Expression Studies. Microorganisms 13(4) PMID: 40284685
      • SGD Paper
      • DOI full text
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    • Ruden DM (2025) GC Content in Nuclear-Encoded Genes and Effective Number of Codons (ENC) Are Positively Correlated in AT-Rich Species and Negatively Correlated in GC-Rich Species. Genes (Basel) 16(4) PMID: 40282392
      • SGD Paper
      • DOI full text
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    • Sarkar N, et al. (2025) Beta-Glucans in Biotechnology: A Holistic Review with a Special Focus on Yeast. Bioengineering (Basel) 12(4) PMID: 40281725
      • SGD Paper
      • DOI full text
      • PMC full text
      • PubMed
    • Xue H and Ma R (2025) Boundary Flow-Induced Membrane Tubulation Under Turgor Pressures. Membranes (Basel) 15(4) PMID: 40277976
      • SGD Paper
      • DOI full text
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    • Mori K, et al. (2025) Comparative metabolome analysis of sake yeast with enhanced fermentation performance in sake fermentation conditions. J Biosci Bioeng PMID: 40288942
      • SGD Paper
      • DOI full text
      • PubMed
    • Dubey P, et al. (2025) Seo1p, a high affinity, plasma membrane transporter of the γ-Glu-met dipeptide in yeasts and fungi. J Biol Chem 108539 PMID: 40288644
      • SGD Paper
      • DOI full text
      • PubMed
      15 Associated Entities: SUL1 | AGP3 | FCY21 | VBA5 | MMP1 | OPT2 | MET17 | SUL2 | MEP2 | ... Show all YCT1 | ATR2 | SEO1 | ECM38 | DUG2 | DUG3 Show fewer

    • Chen X, et al. (2025) The effects of carbendazim on metabolic pathways of Saccharomyces cerevisiae Saflager S-189 and beer characteristics. Int J Food Microbiol 437:111219 PMID: 40288109
      • SGD Paper
      • DOI full text
      • PubMed
    • Wei Y, et al. (2025) Impact of Co-Inoculation Patterns of <i>Wickerhamomyces anomalus</i> and <i>Saccharomyces cerevisiae</i> on Cider Quality and Aromatic Profiles. Molecules 30(7) PMID: 40286241
      • SGD Paper
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    • Muñoz-Castells R, et al. (2025) Application of an Electronic Nose to the Prediction of Odorant Series in Wines Obtained with <i>Saccharomyces</i> or Non-<i>Saccharomyces</i> Yeast Strains. Molecules 30(7) PMID: 40286168
      • SGD Paper
      • DOI full text
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    • Li Y, et al. (2025) Molecular Mechanisms of Pathogenic Fungal Virulence Regulation by Cell Membrane Phospholipids. J Fungi (Basel) 11(4) PMID: 40278077
      • SGD Paper
      • DOI full text
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      8 Associated Entities: MSS4 | CDC43 | STT4 | PIK1 | CDC42 | stt4-4 | mss4-102 | pik1-83 ... Show all Show fewer

    • Han B, et al. (2025) Definer: A computational method for accurate identification of RNA pseudouridine sites based on deep learning. PLoS One 20(4):e0320077 PMID: 40273178
      • SGD Paper
      • DOI full text
      • PMC full text
      • PubMed
    • Guo Z, et al. (2025) Dihydroartemisinic acid dehydrogenase-mediated alternative route for artemisinin biosynthesis. Nat Commun 16(1):3888 PMID: 40274872
      • SGD Paper
      • DOI full text
      • PMC full text
      • PubMed
      7 Associated Entities: ERG20 | CYB5 | ADH1 | MVD1 | HMG1 | ERG10 | IDI1 ... Show all Show fewer

    • Watkins RR, et al. (2025) Unexpected enzymatic function of an ancient nucleic acid-binding fold. Nucleic Acids Res 53(8) PMID: 40274265
      • SGD Paper
      • DOI full text
      • PMC full text
      • PubMed
      1 Associated Entity: ARC1 ... Show all Show fewer

    • Zhang T, et al. (2025) Roles and applications of autophagy in guarding against environmental stress and DNA damage in Saccharomyces cerevisiae. FEBS J PMID: 40272088
      • SGD Paper
      • DOI full text
      • PubMed
      72 Associated Entities: CYR1 | SSA1 | VPS15 | ARP3 | SLT2 | ATG32 | SLN1 | RPB9 | VAM6 | ... Show all TEL1 | HSF1 | PRB1 | GAT1 | UME6 | ATG14 | MEC1 | SEH1 | TPS2 | SSK22 | GCN4 | RIM15 | GPA2 | ATG7 | RPH1 | ATG1 | SCH9 | SKN7 | ATG27 | VAC8 | YPD1 | GLN3 | ATG12 | ARP2 | GPR1 | ATG9 | ATG8 | SIT4 | PBS2 | ATG5 | RAD53 | HOG1 | GTR1 | STE11 | ATG3 | ATG13 | SSK1 | ATG11 | CUE5 | SHO1 | KOG1 | MSN4 | SSK2 | SNF1 | CDC25 | MSN2 | ATG4 | YAP1 | VPS30 | VPS34 | RAS1 | RAS2 | ATG10 | FPS1 | ATG29 | TCO89 | ATG17 | ATG23 | ATG16 | EGO complex | SEA complex | TORC1 serine/threonine-protein kinase complex, TOR1 variant | TORC1 serine/threonine-protein kinase complex, TOR2 variant Show fewer

    • Ludwig K and Heidorn-Czarna M (2025) Mitochondrial Proteases and Their Roles in Mitophagy in Plants, Animals, and Yeast. Plant Cell Physiol PMID: 40269524
      • SGD Paper
      • DOI full text
      • PubMed
      21 Associated Entities: MAS2 | ICP55 | UBP12 | PHB1 | CYM1 | AFG3 | PCP1 | PHB2 | PIM1 | ... Show all MCX1 | PRD1 | OCT1 | MAS1 | UBP16 | YTA12 | YME1 | IMP2 | OMA1 | MAP1 | ATG23 | IMP1 Show fewer

    • Tumini E, et al. (2025) Patulin and Xestoquinol are inhibitors of DNA topoisomerase 1. Proc Natl Acad Sci U S A 122(17):e2421167122 PMID: 40273104
      • SGD Paper
      • DOI full text
      • PubMed
      6 Associated Entities: PAT1 | BCK2 | LSM1 | TOP1 | TOP2 | top2-1 ... Show all Show fewer

    • Niphadkar S, et al. (2025) Protocol to quantitatively assess glycolysis and related carbon metabolic fluxes using stable isotope tracing in Crabtree-positive yeasts. STAR Protoc 6(2):103786 PMID: 40266845
      • SGD Paper
      • DOI full text
      • PubMed
      2 Associated Entities: TDH3 | TDH2 ... Show all Show fewer

    • Matsuzaki M, et al. (2025) TRS85 and LEM3 suppressor mutations rescue stress hypersensitivities caused by lack of structural diversity of complex sphingolipids in budding yeast. FEBS J PMID: 40266832
      • SGD Paper
      • DOI full text
      • PubMed
      19 Associated Entities: SNC1 | CSH1 | SEC7 | TCA17 | SUR2 | TRS33 | TLG1 | SCS7 | SUR1 | ... Show all DNF2 | YPT1 | DNF1 | TRS65 | LEM3 | MSN4 | YNR048W | TRS85 | MSN2 | snc1-V40A,M43A Show fewer

    • Kolbin D, et al. (2025) The centromere bottlebrush requires a multi-microtubule attachment. Mol Biol Cell mbcE25020050 PMID: 40266738
      • SGD Paper
      • DOI full text
      • PubMed
      5 Associated Entities: NDC80 | MCD1 | CEN15 | CSE4 | AME1 ... Show all Show fewer

    • Martins C, et al. (2025) Whole yeast cell synthesis of 5-hydroxymethylfurfural-derivatives from apple waste processed by green technologies. Bioresour Technol 430:132570 PMID: 40268096
      • SGD Paper
      • DOI full text
      • PubMed
    • Juarez-Contreras I, et al. (2025) Structural dissection of ergosterol metabolism reveals a pathway optimized for membrane phase separation. Sci Adv 11(17):eadu7190 PMID: 40267201
      • SGD Paper
      • DOI full text
      • PMC full text
      • PubMed
      13 Associated Entities: ERG25 | ERG26 | ERG7 | ERG4 | ERG11 | ERG1 | ERG2 | ERG24 | ERG5 | ... Show all ERG9 | ERG6 | ERG27 | ERG3 Show fewer

    • Li Y, et al. (2025) Coarse-Grained Modeling Elucidates Differential Metabolism of <i>Saccharomyces cerevisiae</i> under Varied Nutrient Limitations. ACS Synth Biol PMID: 40266044
      • SGD Paper
      • DOI full text
      • PubMed
    • Kobalter S, et al. (2025) Engineering yeast for tailored fatty acid profiles. Appl Microbiol Biotechnol 109(1):101 PMID: 40263140
      • SGD Paper
      • DOI full text
      • PMC full text
      • PubMed
      25 Associated Entities: FAS1 | FAA3 | ELO2 | GAT1 | SPT23 | FAA2 | CDS1 | FAT1 | SCT1 | ... Show all MGA2 | POX1 | FOX2 | SLC1 | DPP1 | OLE1 | ELO3 | FAA1 | LPP1 | FAA4 | PAH1 | ALE1 | FAS2 | GPT2 | APP1 | GAT2 Show fewer

    • Engler S and Buchner J (2025) The evolution and diversification of the Hsp90 co-chaperone system. Biol Chem PMID: 40261701
      • SGD Paper
      • DOI full text
      • PubMed
      15 Associated Entities: AHA1 | PIH1 | CNS1 | TAH1 | CPR7 | PPT1 | CDC37 | EFT2 | SBA1 | ... Show all HCH1 | SGT1 | TOM70 | STI1 | SHE4 | CPR6 Show fewer

    • Khullar S, et al. (2025) NetREm: Network Regression Embeddings reveal cell-type transcription factor coordination for gene regulation. Bioinform Adv 5(1):vbae206 PMID: 40260118
      • SGD Paper
      • DOI full text
      • PMC full text
      • PubMed
    • Parmar S, et al. (2025) Temporal Proteomic Profiling of Pheromone-Induced Cell Cycle Re-Entry in Saccharomyces cerevisiae. Proteomics e202400455 PMID: 40259487
      • SGD Paper
      • DOI full text
      • PubMed
      13 Associated Entities: BAR1 | FAR1 | CIN8 | FUS2 | FUS3 | MCD1 | FUS1 | KIP3 | CLB2 | ... Show all ACM1 | KAR3 | HOF1 | CHS1 Show fewer

    • Chen Q, et al. (2025) Electron transfer engineering of artificially designed cell factory for complete biosynthesis of steroids. Nat Commun 16(1):3740 PMID: 40258825
      • SGD Paper
      • DOI full text
      • PMC full text
      • PubMed
    • Kusi-Appauh N, et al. (2025) Single-Molecule Fluorescence Visualization of DNA Polymerase Dynamics at G-Quadruplexes. J Vis Exp PMID: 40257922
      • SGD Paper
      • DOI full text
      • PubMed
      1 Associated Entity: DNA polymerase delta complex ... Show all Show fewer

    • Jeronimo C, et al. (2025) Genome-Wide Nucleosome Mapping by H3Q85C-Directed Chemical Cleavage in Saccharomyces cerevisiae. Methods Mol Biol 2919:155-177 PMID: 40257562
      • SGD Paper
      • DOI full text
      • PubMed
    • Fujiwara H, et al. (2025) <sup>13</sup>C-metabolic flux analysis of <i>Saccharomyces cerevisiae</i> in complex media. Metab Eng Commun 20:e00260 PMID: 40256657
      • SGD Paper
      • DOI full text
      • PMC full text
      • PubMed
    • Zeng L, et al. (2025) Checkpoint and recombination pathways independently suppress rates of spontaneous homology-directed chromosomal translocations in budding yeast. Front Genet 16:1479307 PMID: 40255487
      • SGD Paper
      • DOI full text
      • PMC full text
      • PubMed
      8 Associated Entities: RAD9 | MEC1 | RAD51 | RAD55 | MRE11 | RAD50 | RAD57 | XRS2 ... Show all Show fewer

    • Saito A, et al. (2025) Sortase A-Mediated Ligation Facilitates Metabolic Channeling in <i>Saccharomyces cerevisiae</i>. ACS Synth Biol PMID: 40254838
      • SGD Paper
      • DOI full text
      • PubMed
    • Jeong DW, et al. (2025) Auto-sumoylation of the yeast Ubc9 E2 SUMO-conjugating enzyme extends cellular lifespan. Nat Commun 16(1):3735 PMID: 40254622
      • SGD Paper
      • DOI full text
      • PMC full text
      • PubMed
      2 Associated Entities: UBC9 | ULP2 ... Show all Show fewer

    • Minebois R, et al. (2025) Combined Isotopic Tracer and Modelling Approach Reveals Differences in Nitrogen Metabolism in S. cerevisiae, S. uvarum and S. kudriavzevii Species. Microb Biotechnol 18(4):e70087 PMID: 40251794
      • SGD Paper
      • DOI full text
      • PMC full text
      • PubMed
    • Podh NK, et al. (2025) Single-molecule tracking reveals the dynamic turnover of Ipl1 at the kinetochores in <i>Saccharomyces cerevisiae</i>. Life Sci Alliance 8(7) PMID: 40250989
      • SGD Paper
      • DOI full text
      • PMC full text
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      5 Associated Entities: GLC7 | IPL1 | BIR1 | SLI15 | NBL1 ... Show all Show fewer

    • Zhang J and Zhang QC (2025) Tracking the folding of RNA at its birth. Mol Cell 85(8):1477-1479 PMID: 40250407
      • SGD Paper
      • DOI full text
      • PubMed
    • Lee MK, et al. (2025) Nutrient starvation-induced Hda1C rewiring: coordinated regulation of transcription and translation. Nucleic Acids Res 53(7) PMID: 40248913
      • SGD Paper
      • DOI full text
      • PMC full text
      • PubMed
      2 Associated Entities: RAP1 | HDA1 histone deacetylase complex ... Show all Show fewer

    • Szeto JA, et al. (2025) Dynamic RNA binding and unfolding by nonsense-mediated mRNA decay factor UPF2. RNA PMID: 40246535
      • SGD Paper
      • DOI full text
      • PubMed
      3 Associated Entities: UPF3 | NMD2 | NAM7 ... Show all Show fewer

    • Trubitsina NP, et al. (2025) Prion-Dependent Lethality of <i>sup35</i> Missense Mutations Is Caused by Low GTPase Activity of the Mutant eRF3 Protein. Int J Mol Sci 26(7) PMID: 40244414
      • SGD Paper
      • DOI full text
      • PMC full text
      • PubMed
      1 Associated Entity: SUP35 ... Show all Show fewer

    • Ma M, et al. (2025) Overexpression of tRNA m<sup>7</sup>G modification methyltransferase complex promotes the biosynthesis of triterpene in yeast. Front Microbiol 16:1557443 PMID: 40231236
      • SGD Paper
      • DOI full text
      • PMC full text
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      2 Associated Entities: TRM8 | TRM82 ... Show all Show fewer

    • Scherf D, et al. (2025) tRNA binding to Kti12 is crucial for wobble uridine modification by Elongator. Nucleic Acids Res 53(7) PMID: 40226916
      • SGD Paper
      • DOI full text
      • PMC full text
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      2 Associated Entities: KTI12 | Elongator holoenzyme complex ... Show all Show fewer

    • Pan Y, et al. (2025) Inherent asymmetry of Rpd3S coordinates its nucleosome engagement and association with elongating RNA polymerase II. Nat Struct Mol Biol 32(4):687-697 PMID: 39779918
      • SGD Paper
      • DOI full text
      • PubMed
      4 Associated Entities: RCO1 | EAF3 | RPD3S histone deacetylase complex | DNA-directed RNA polymerase II complex ... Show all Show fewer

    • Ghogare SS and Pathan EK (2025) Intratumor fungi specific mechanisms to influence cell death pathways and trigger tumor cell apoptosis. Cell Death Discov 11(1):188 PMID: 40258837
      • SGD Paper
      • DOI full text
      • PMC full text
      • PubMed
    • Xu K, et al. (2025) Anchor-Away: Efficient, Conditional Depletion of Nuclear Proteins in Saccharomyces cerevisiae. Methods Mol Biol 2919:267-278 PMID: 40257568
      • SGD Paper
      • DOI full text
      • PubMed
      5 Associated Entities: TOR1 | FPR1 | SFP1 | ESA1 | TOR1-1 ... Show all Show fewer

    • Muguet A, et al. (2025) Psoralen Crosslinking-Chromatin Endogenous Cleavage Assay to Examine Histone DNA Interactions of Active and Inactive rRNA Genes. Methods Mol Biol 2919:133-154 PMID: 40257561
      • SGD Paper
      • DOI full text
      • PubMed
      6 Associated Entities: RDN1 | RDN18-1 | RDN18-2 | RDN25-2 | RDN37-1 | RDN37-2 ... Show all Show fewer

    • Zhang M, et al. (2025) Reinforced NADPH regeneration in engineered Saccharomyces cerevisiae enhances rosmarinic acid production. Arch Microbiol 207(6):125 PMID: 40257539
      • SGD Paper
      • DOI full text
      • PubMed
      6 Associated Entities: ZWF1 | ARO7 | POS5 | ARO4 | aro4-K229L | aro7-G141S ... Show all Show fewer

    • Sterrett MC, et al. (2025) Comparative analyses of disease-linked missense mutations in the RNA exosome modeled in budding yeast reveal distinct functional consequences in translation. RNA PMID: 40246537
      • SGD Paper
      • DOI full text
      • PubMed
      4 Associated Entities: RRP46 | RRP4 | RRP40 | rrp46-L191H ... Show all Show fewer

    • Demissie EA, et al. (2025) Comparative Analysis of Codon Optimization Tools: Advancing toward a Multi-Criteria Framework for Synthetic Gene Design. J Microbiol Biotechnol 35:e2411066 PMID: 40223268
      • SGD Paper
      • DOI full text
      • PMC full text
      • PubMed
    • Liu Y, et al. (2025) RNA Modifications and Prp24 Coordinate Lsm2-8 Binding Dynamics during S. cerevisiae U6 snRNP Assembly. J Biol Chem 108497 PMID: 40216252
      • SGD Paper
      • DOI full text
      • PubMed
      3 Associated Entities: SNR6 | PRP24 | LSM2-8 complex ... Show all Show fewer

    • Collins BM and Cullen PJ (2025) Separation of powers: A key feature underlying the neuroprotective role of Retromer in age-related neurodegenerative disease? Curr Opin Cell Biol 94:102516 PMID: 40253888
      • SGD Paper
      • DOI full text
      • PubMed
      8 Associated Entities: VPS35 | YPT7 | PEP8 | VPS29 | VPS5 | VPS17 | SNX3 | Retromer complex ... Show all Show fewer

    • Mertz TM, et al. (2025) Defining APOBEC-induced mutation signatures and modifying activities in yeast. Methods Enzymol 713:115-161 PMID: 40250951
      • SGD Paper
      • DOI full text
      • PubMed
    • Tu S, et al. (2025) Enhanced chlorogenic acid production from glucose via systematic metabolic engineering of <i>Saccharomyces cerevisiae</i>. Synth Syst Biotechnol 10(3):707-718 PMID: 40248482
      • SGD Paper
      • DOI full text
      • PMC full text
      • PubMed
      6 Associated Entities: YJL028W | ZWF1 | PFK2 | HMX1 | INO2 | GND1 ... Show all Show fewer

    • Yone H, et al. (2025) Light-controlled Spo11-less meiotic DNA breaks by MagTAQing lead to chromosomal aberrations. Nucleic Acids Res 53(7) PMID: 40207630
      • SGD Paper
      • DOI full text
      • PMC full text
      • PubMed
      1 Associated Entity: SPO11 ... Show all Show fewer

    • Karapanagioti F, et al. (2025) The Saccharomyces cerevisiae amino acid transporter Lyp1 has a broad substrate spectrum. FEBS Lett PMID: 40247776
      • SGD Paper
      • DOI full text
      • PubMed
      10 Associated Entities: GAP1 | CAN1 | UGA4 | HIP1 | GNP1 | AGP1 | DIP5 | ALP1 | PUT4 | ... Show all LYP1 Show fewer

    • Genthon A (2025) From noisy cell size control to population growth: When variability can be beneficial. Phys Rev E 111(3-1):034407 PMID: 40247490
      • SGD Paper
      • DOI full text
      • PubMed
    • Singh G, et al. (2025) Active control of mitochondrial network morphology by metabolism-driven redox state. Proc Natl Acad Sci U S A 122(16):e2421953122 PMID: 40244668
      • SGD Paper
      • DOI full text
      • PMC full text
      • PubMed
      4 Associated Entities: FIS1 | FZO1 | DNM1 | MDM1 ... Show all Show fewer

    • Huo J, et al. (2025) The Yeast HMGB Protein Hmo1 Is a Multifaceted Regulator of DNA Damage Tolerance. Int J Mol Sci 26(7) PMID: 40244093
      • SGD Paper
      • DOI full text
      • PMC full text
      • PubMed
      6 Associated Entities: HMO1 | MUS81 | SGS1 | RMI1 | SLX4 | TOP3 ... Show all Show fewer

    • Tominaga M, et al. (2025) Production of borneol, camphor, and bornyl acetate using engineered <i>Saccharomyces cerevisiae</i>. Metab Eng Commun 20:e00259 PMID: 40242661
      • SGD Paper
      • DOI full text
      • PMC full text
      • PubMed
      2 Associated Entities: ERG20 | erg20-F96W,N127W ... Show all Show fewer

    • Mahendrawada L, et al. (2025) Low overlap of transcription factor DNA binding and regulatory targets. Nature PMID: 40240607
      • SGD Paper
      • DOI full text
      • PubMed
    • Takacs L, et al. (2025) Evidence of substrate control of Cdk phosphorylation during the budding yeast cell cycle. Cell Rep 44(4):115534 PMID: 40220295
      • SGD Paper
      • DOI full text
      • PubMed
      3 Associated Entities: ORC6 | NDD1 | ASK1 ... Show all Show fewer

    • Gogianu LI, et al. (2025) KCS1 and VIP1, the genes encoding yeast phosphoinositol pyrophosphate synthases, are required for Ca<sup>2+</sup>-mediated response to dimethylsulfoxide (DMSO). FEBS Open Bio PMID: 40214101
      • SGD Paper
      • DOI full text
      • PubMed
      4 Associated Entities: KCS1 | MID1 | VIP1 | CCH1 ... Show all Show fewer

    • Kuzman M, et al. (2025) Advancing yeast metabolism for a sustainable single carbon bioeconomy. FEMS Yeast Res 25 PMID: 40246696
      • SGD Paper
      • DOI full text
      • PMC full text
      • PubMed
    • Hara D, et al. (2025) Data-independent acquisition-based lipidomics reveals lipidome alterations associated with growth of Saccharomyces cerevisiae at low temperature. J Biosci Bioeng PMID: 40246645
      • SGD Paper
      • DOI full text
      • PubMed
      11 Associated Entities: PCT1 | SCT1 | SLC1 | OLE1 | LRO1 | NTE1 | PIS1 | PLB1 | CKI1 | ... Show all ALE1 | DGA1 Show fewer

    • Li Q, et al. (2025) Transcriptome profiling unravels improved ethanol production and acetic acid tolerance in yeast by preculture of wheat gluten hydrolysates. J Biotechnol 403:103-114 PMID: 40246175
      • SGD Paper
      • DOI full text
      • PubMed
      31 Associated Entities: ELO1 | PIR1 | ELO2 | TPS1 | OPT1 | TPS2 | TIR1 | HXK1 | CSH1 | ... Show all HXK2 | HXT3 | SOD1 | CTT1 | CRH1 | PMA1 | GSH1 | TRR1 | VMA7 | GPP2 | DAL5 | GCY1 | HXT2 | OPT2 | ERG6 | TSL1 | PTR2 | SUR1 | FKS1 | STV1 | ERG3 | GPD2 Show fewer

    • Jaunbocus N, et al. (2025) Eukaryotic Microproteins. Annu Rev Biochem PMID: 40245354
      • SGD Paper
      • DOI full text
      • PubMed
    • Wang Q, et al. (2025) Highly Efficient Display of Oligomeric Enzymes on Yeast Surface for Enhanced Glycyrrhizin Hydrolysis and Cellulosic Ethanol Production. ACS Synth Biol PMID: 40230192
      • SGD Paper
      • DOI full text
      • PubMed
      3 Associated Entities: PIR1 | SED1 | SAG1 ... Show all Show fewer

    • Kropp PA, et al. (2021) Allele-specific mitochondrial stress induced by Multiple Mitochondrial Dysfunctions Syndrome 1 pathogenic mutations modeled in Caenorhabditis elegans. PLoS Genet 17(8):e1009771 PMID: 34449775
      • SGD Paper
      • DOI full text
      • PMC full text
      • PubMed
      1 Associated Entity: NFU1 ... Show all Show fewer

    • Chen KE, et al. (2025) Molecular basis for the assembly of the Vps5-Vps17 SNX-BAR proteins with Retromer. Nat Commun 16(1):3568 PMID: 40234461
      • SGD Paper
      • DOI full text
      • PMC full text
      • PubMed
      7 Associated Entities: VPS35 | PEP8 | VPS5 | VPS17 | Retromer complex | vps5-L196R | vps5-L121G,F122G,F161E,L196R ... Show all Show fewer

    • Xiao T and Ünal E (2025) Remodeling, compartmentalization, and degradation: a trifecta for organelle quality control during gametogenesis. Curr Opin Genet Dev 92:102347 PMID: 40233504
      • SGD Paper
      • DOI full text
      • PubMed
    • Liu S, et al. (2025) Yeast models of mutations in NFU1 gene for biochemical characterization and drug screening. Biochem Biophys Res Commun 763:151760 PMID: 40233434
      • SGD Paper
      • DOI full text
      • PubMed
      5 Associated Entities: NFU1 | nfu1-G194C | nfu1-R166W | nfu1-G173R | nfu1-C196F ... Show all Show fewer

    • Ahlawat N, et al. (2025) Resource presentation dictates genetic and phenotypic adaptation in yeast. BMC Ecol Evol 25(1):33 PMID: 40234742
      • SGD Paper
      • DOI full text
      • PMC full text
      • PubMed
    • Sekne Z, et al. (2025) Structural Biology of Telomerase and Associated Factors. Cold Spring Harb Perspect Biol PMID: 40234053
      • SGD Paper
      • DOI full text
      • PubMed
      15 Associated Entities: SIR4 | EST3 | STN1 | CDC13 | POP6 | TEN1 | POP7 | TLC1 | EST2 | ... Show all RAP1 | POP1 | EST1 | CST complex | Sir2-3-4 silent chromatin complex | Ku70:Ku80 complex Show fewer

    • Fiorentino F, et al. (2025) Highly conserved ribosome biogenesis pathways between human and yeast revealed by the MDN1-NLE1 interaction and NLE1 containing pre-60S subunits. Nucleic Acids Res 53(7) PMID: 40207627
      • SGD Paper
      • DOI full text
      • PMC full text
      • PubMed
      2 Associated Entities: RSA4 | REA1 ... Show all Show fewer

    • Zencir S, et al. (2025) A two-step regulatory mechanism dynamically controls histone H3 acetylation by SAGA complex at growth-related promoters. Nucleic Acids Res 53(7) PMID: 40207626
      • SGD Paper
      • DOI full text
      • PMC full text
      • PubMed
      3 Associated Entities: HHT1 | HHT2 | SAGA complex ... Show all Show fewer

    • Sanders J, et al. (2025) An Improved Cytological Assay for R-loop Detection in Saccharomyces cerevisiae Utilizing a Catalytically Inactive RNase H. G3 (Bethesda) PMID: 40205716
      • SGD Paper
      • DOI full text
      • PubMed
      1 Associated Entity: RNH1 ... Show all Show fewer

    • Das E, et al. (2025) Spatial mechanisms of quality control during chaperone-mediated assembly of the proteasome. Nat Commun 16(1):3358 PMID: 40204796
      • SGD Paper
      • DOI full text
      • PMC full text
      • PubMed
      9 Associated Entities: RPT3 | RPT1 | RPT5 | SRP1 | HSM3 | NAS2 | RPN14 | NAS6 | RPT2 ... Show all Show fewer

    • Buchholz HE, et al. (2025) Hsp70 chaperones, Ssa1 and Ssa2, limit poly(A) binding protein aggregation. Mol Biol Cell mbcE25010027 PMID: 40202836
      • SGD Paper
      • DOI full text
      • PubMed
      5 Associated Entities: PAB1 | SSA1 | SIS1 | SSA2 | HSP104 ... Show all Show fewer

    • Paternoga H, et al. (2025) Structure of a Gcn2 dimer in complex with the large 60S ribosomal subunit. Proc Natl Acad Sci U S A 122(15):e2415807122 PMID: 40198700
      • SGD Paper
      • DOI full text
      • PMC full text
      • PubMed
      6 Associated Entities: SUI2 | GCN1 | GCN20 | GCN2 | RDN25-1 | RDN25-2 ... Show all Show fewer

    • Kanai M, et al. (2025) Efficient genes identification via quantitative trait loci analysis by crossbreeding of sake and laboratory yeast. Appl Microbiol Biotechnol 109(1):84 PMID: 40198396
      • SGD Paper
      • DOI full text
      • PMC full text
      • PubMed
    • Singh R and Tomar RS (2025) An Uncharacterized Domain Within the N-Terminal Tail of Histone H3 Regulates the Transcription of FLO1 via Cyc8. Mol Microbiol PMID: 40196922
      • SGD Paper
      • DOI full text
      • PubMed
      6 Associated Entities: CYC8 | FLO1 | FLO5 | HDA1 | HHT1 | HHT2 ... Show all Show fewer

    • Tran PHN and Lee TS (2025) Harnessing organelle engineering to facilitate biofuels and biochemicals production in yeast. J Microbiol 63(3):e2501006 PMID: 40195834
      • SGD Paper
      • DOI full text
      • PubMed
      9 Associated Entities: MMF1 | COX6 | LSC2 | COX4 | CAT2 | HSP60 | CYB2 | ALD4 | COQ3 ... Show all Show fewer

    • Chen X and Jin H (2025) Essential Roles of Conserved Pseudouridines in Helix 69 for Ribosome Dynamics in Translation. J Mol Biol 437(14):169132 PMID: 40194619
      • SGD Paper
      • DOI full text
      • PubMed
      3 Associated Entities: SNR191 | RDN25-1 | RDN25-2 ... Show all Show fewer

    • Seyis M, et al. (2025) Flux-sum coupling analysis of metabolic network models. PLoS Comput Biol 21(4):e1012972 PMID: 40193389
      • SGD Paper
      • DOI full text
      • PMC full text
      • PubMed
    • Jhuang HY, et al. (2025) Cytoduction Preserves Genetic Diversity Following Plasmid Transfer Into Pooled Yeast Libraries. Yeast PMID: 40192004
      • SGD Paper
      • DOI full text
      • PubMed
      15 Associated Entities: BAR1 | FLO8 | IRA1 | GPA2 | HAL5 | MDS3 | GPA1 | ENA1 | SEC10 | ... Show all HAP1 | PHO84 | MOT3 | SKS1 | IRA2 | MKT1 Show fewer

    • Horie F, et al. (2025) Yeast Hsp78 plays an essential role in adapting to severe ethanol stress via mild ethanol stress pretreatment in mitochondrial protein quality control. Biochim Biophys Acta Gen Subj 1869(6):130804 PMID: 40187374
      • SGD Paper
      • DOI full text
      • PubMed
      5 Associated Entities: SSC1 | ACO1 | HSP10 | MDJ1 | HSP78 ... Show all Show fewer

    • Ungermann C and Moeller A (2025) Structuring of the endolysosomal system by HOPS and CORVET tethering complexes. Curr Opin Cell Biol 94:102504 PMID: 40187049
      • SGD Paper
      • DOI full text
      • PubMed
      2 Associated Entities: HOPS tethering complex | CORVET tethering complex ... Show all Show fewer

    • Deng R, et al. (2025) Inhibition of mitochondrial complex I induces mitochondrial ferroptosis by regulating CoQH2 levels in cancer. Cell Death Dis 16(1):254 PMID: 40185704
      • SGD Paper
      • DOI full text
      • PMC full text
      • PubMed
      1 Associated Entity: NDI1 ... Show all Show fewer

    • Hofbauer HF, et al. (2018) The molecular recognition of phosphatidic acid by an amphipathic helix in Opi1. J Cell Biol 217(9):3109-3126 PMID: 29941475
      • SGD Paper
      • DOI full text
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      11 Associated Entities: OPI1 | SPO20 | opi1-Y127W | opi1-Y127D | opi1-Y127A | opi1-Y127R | opi1-Y127K | opi1-Y127L | opi1-G120W | ... Show all opi1-G120W,Y127A | opi1-KRQK->AAQA Show fewer

    • Zheng X, et al. (2025) Decoding Specificity of Cyanobacterial MysDs in Mycosporine-like Amino Acid Biosynthesis through Heterologous Expression in <i>Saccharomyces cerevisiae</i>. ACS Omega 10(13):13664-13673 PMID: 40224414
      • SGD Paper
      • DOI full text
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      2 Associated Entities: NQM1 | TAL1 ... Show all Show fewer

    • Greenwald E, et al. (2025) DragonRNA: Generality of DNA-primed RNA-extension activities by DNA-directed RNA polymerases. Nucleic Acids Res 53(6) PMID: 40197829
      • SGD Paper
      • DOI full text
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      1 Associated Entity: RPO41 ... Show all Show fewer

    • Le HG, et al. (2025) Synthetic biology strategies for sustainable bioplastic production by yeasts. J Microbiol 63(3):e2501022 PMID: 40195837
      • SGD Paper
      • DOI full text
      • PubMed
      38 Associated Entities: CIT2 | PGK1 | NDE2 | TPI1 | GPM1 | ADH5 | HXK2 | ADH4 | HXT7 | ... Show all PDC6 | TDH3 | ENO2 | JEN1 | DLD1 | DLD2 | PFK1 | GPD1 | PAD1 | ARO3 | MTH1 | PFK2 | ALD6 | ADH3 | MLS1 | CYB2 | ADH2 | ADH1 | PGI1 | ARO2 | PDC5 | PYK2 | HAA1 | RIC1 | PDC1 | NDE1 | GPD2 | FBA1 | ARO4 Show fewer

    • Nelson CR, et al. (2025) Spindle integrity is regulated by a phospho-dependent interaction between the Ndc80 and Dam1 kinetochore complexes. PLoS Genet 21(4):e1011645 PMID: 40184422
      • SGD Paper
      • DOI full text
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      4 Associated Entities: NDC80 | MPS1 | DASH complex | NDC80 complex ... Show all Show fewer

    • Yang S, et al. (2025) Temporal oscillation of phospholipids promotes metabolic efficiency. Nat Chem Biol PMID: 40229581
      • SGD Paper
      • DOI full text
      • PubMed
      14 Associated Entities: OPI1 | CHO2 | OPI3 | PCT1 | ECT1 | EKI1 | PSD2 | EPT1 | LRO1 | ... Show all PAH1 | CPT1 | PSD1 | DGA1 | opi1-Y127D Show fewer

    • Yu H, et al. (2025) Metabolic engineering of yeast to efficiently synthesize heme and hemoproteins: recent advance and prospects. FEMS Yeast Res 25 PMID: 40228812
      • SGD Paper
      • DOI full text
      • PMC full text
      • PubMed
      30 Associated Entities: GCV1 | ACO2 | SHM1 | HEM3 | CYC8 | GCV3 | HEM14 | HEM1 | FRE2 | ... Show all LSC2 | PEP1 | HEM2 | HEM13 | HEM12 | PEP4 | GCV2 | HAP1 | HMX1 | FET4 | LSC1 | FRE3 | FIT2 | ROX1 | FTR1 | FRE1 | SSN3 | HEM15 | HEM4 | FET3 | PUG1 Show fewer

    • Bengs BD, et al. (2025) Integrative approaches for predicting protein network perturbations through machine learning and structural characterization. J Proteomics 316:105439 PMID: 40228603
      • SGD Paper
      • DOI full text
      • PubMed
      33 Associated Entities: ARF1 | IES1 | EPL1 | RVB1 | EAF6 | IES5 | ACT1 | YTA7 | EAF5 | ... Show all EAF1 | HIR3 | YNG2 | TRA1 | NHP10 | IES6 | HTZ1 | IES4 | RVB2 | ARP4 | EAF3 | ARP5 | ARP8 | INO80 | VPS72 | ARP6 | IES2 | EAF7 | IES3 | ESA1 | SWI/SNF chromatin remodelling complex | INO80 chromatin remodeling complex | Swr1 chromatin remodelling complex | NuA4 histone acetyltransferase complex Show fewer

    • James M, et al. (2025) Autophagy-deficient budding yeast cells are sensitive to freeze-thaw stress. MicroPubl Biol 2025 PMID: 40226511
      • SGD Paper
      • DOI full text
      • PMC full text
      • PubMed
      2 Associated Entities: ATG1 | ATG5 ... Show all Show fewer

    • (2025) Correction for Sahi and Craig, Network of general and specialty J protein chaperones of the yeast cytosol. Proc Natl Acad Sci U S A 122(16):e2504093122 PMID: 40215286
      • SGD Paper
      • DOI full text
      • PMC full text
      • PubMed
    • Lim YJ and Lee YH (2025) Solo or in Concert: SUMOylation in Pathogenic Fungi. Plant Pathol J 41(2):140-152 PMID: 40211619
      • SGD Paper
      • DOI full text
      • PMC full text
      • PubMed
      18 Associated Entities: UBA2 | SIZ1 | WSS1 | RAD18 | CDC48 | SMT3 | RPN10 | ULP2 | MMS21 | ... Show all SLX5 | UBC9 | UFD1 | ULS1 | AOS1 | CST9 | ULP1 | SLX8 | NFI1 Show fewer

    • Sun Y, et al. (2025) Elucidation and de novo reconstitution of glyceollin biosynthesis. Mol Plant PMID: 40211535
      • SGD Paper
      • DOI full text
      • PubMed
      7 Associated Entities: ERG20 | ARO10 | ARO7 | IDI1 | ARO4 | aro4-K229L | aro7-G141S ... Show all Show fewer

    • Lam WH, et al. (2025) DNA bending mediated by ORC is essential for replication licensing in budding yeast. Proc Natl Acad Sci U S A 122(14):e2502277122 PMID: 40184174
      • SGD Paper
      • DOI full text
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      4 Associated Entities: ORC6 | ORC5 | orc6-∆AI(∆6AI) | orc5-3A ... Show all Show fewer

    • Avellaneda Penatti NM, et al. (2025) Decreased levels of Prx1 are associated with proteasome impairment and mitochondrial dysfunction in the yeast Saccharomycescerevisiae. Arch Biochem Biophys 768:110406 PMID: 40180294
      • SGD Paper
      • DOI full text
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      3 Associated Entities: PRX1 | PUP2 | pup2-C76S ... Show all Show fewer

    • Zhao Y, et al. (2025) Structural basis for hygromycin B inhibition of yeast pseudouridine-deficient ribosomes. Sci Adv 11(14):eadu0151 PMID: 40173234
      • SGD Paper
      • DOI full text
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      4 Associated Entities: EFT2 | CBF5 | EFT1 | cbf5-D95A ... Show all Show fewer

    • Torello Pianale L, et al. (2025) Physiology and Robustness of Yeasts Exposed to Dynamic pH and Glucose Environments. Biotechnol Bioeng PMID: 40219637
      • SGD Paper
      • DOI full text
      • PubMed
    • Banderas A, et al. (2025) Optogenetic control of pheromone gradients and mating behavior in budding yeast. Life Sci Alliance 8(6) PMID: 40216553
      • SGD Paper
      • DOI full text
      • PMC full text
      • PubMed
      3 Associated Entities: MF(ALPHA)2 | BAR1 | MF(ALPHA)1 ... Show all Show fewer

    • Nakazawa T, et al. (2025) Pleurotus ostreatus mek1 is essential for meiosis and basidiospore production. Fungal Biol 129(3):101562 PMID: 40222769
      • SGD Paper
      • DOI full text
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      1 Associated Entity: MEK1 ... Show all Show fewer

    • Baskin A, et al. (2025) All intrinsically active Erk1/2 mutants autophosphorylate Threonine207/188, a plausible regulator of the TEY motif phosphorylation. J Biol Chem 108509 PMID: 40222547
      • SGD Paper
      • DOI full text
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      5 Associated Entities: MKK2 | MKK1 | SLT2 | slt2-T195A | slt2-T195E ... Show all Show fewer

    • Kikuta H, et al. (2025) Genome-wide screening reveals repression by nuclear exosome as a prerequisite for intron-mediated enhancement in Saccharomyces cerevisiae. Biochim Biophys Acta Gene Regul Mech 1868(2):195089 PMID: 40220860
      • SGD Paper
      • DOI full text
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      27 Associated Entities: SWC3 | RRP43 | UME6 | RRP42 | NUP84 | NRD1 | SRB8 | SWR1 | RRP46 | ... Show all LRP1 | NGG1 | RRP45 | DIS3 | VPS71 | SSN8 | CSE2 | CTF3 | CTF19 | RRP6 | MED1 | VPS72 | ARP6 | NUP133 | FYV6 | VIP1 | STO1 | CDC73 Show fewer

    • Armengaud J, et al. (2025) Novel model organisms and proteomics for a better biological understanding. J Proteomics 316:105441 PMID: 40216077
      • SGD Paper
      • DOI full text
      • PubMed
    • Cheng C, et al. (2025) Histone H3 cysteine 110 enhances iron metabolism and modulates replicative life span in <i>Saccharomyces cerevisiae</i>. Sci Adv 11(15):eadv4082 PMID: 40215312
      • SGD Paper
      • DOI full text
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      4 Associated Entities: CUP1-1 | CUP1-2 | HHT1 | HHT2 ... Show all Show fewer

    • Patel M, et al. (2025) Expression, Purification, and Preliminary Characterization of Putative Protein Tyrosine Phosphatase Oca1. Protein Pept Lett PMID: 40212001
      • SGD Paper
      • DOI full text
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      1 Associated Entity: OCA1 ... Show all Show fewer

    • Wang Y, et al. (2025) A unique mechanism of snRNP core assembly. Nat Commun 16(1):3166 PMID: 40175367
      • SGD Paper
      • DOI full text
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      2 Associated Entities: LOT5 | BRR1 ... Show all Show fewer

    • Paukštytė J, et al. (2025) A dual reporter system for intracellular and extracellular amino acid sensing in budding yeast. Mol Biol Cell mbcE24040162 PMID: 40172974
      • SGD Paper
      • DOI full text
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      3 Associated Entities: SSY5 | GCN4 | TORC1 serine/threonine-protein kinase complex, TOR1 variant ... Show all Show fewer

    • Takaine M, et al. (2025) Phase separation of the PRPP amidotransferase into dynamic condensates promotes de novo purine synthesis in yeast. PLoS Biol 23(4):e3003111 PMID: 40208903
      • SGD Paper
      • DOI full text
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      12 Associated Entities: EGO2 | PIB2 | SIT4 | GTR2 | GTR1 | ADE12 | FPR1 | SFP1 | ADE4 | ... Show all TORC1 serine/threonine-protein kinase complex, TOR1 variant | ade4-∆486-510 | ade4-D373A,D374A Show fewer

    • Dhillon PK, et al. (2025) Harnessing killer yeast system: from molecular insight to real world biocontrol solution. Arch Microbiol 207(5):116 PMID: 40198331
      • SGD Paper
      • DOI full text
      • PubMed
    • Wei Y, et al. (2025) Integrated transcriptome and proteome analysis unveils black tea polyphenols metabolic pathways in Saccharomyces cerevisiae. Food Microbiol 130:104777 PMID: 40210400
      • SGD Paper
      • DOI full text
      • PubMed
      18 Associated Entities: TGL1 | BDH1 | ERG25 | ORA1 | ACF2 | FET5 | CPS1 | GAS3 | ACH1 | ... Show all HYR1 | COQ6 | ERG1 | OYE2 | ERG10 | EXG1 | CCP1 | FET3 | OYE3 Show fewer

    • Su WH, et al. (2025) Spermidine toxicity in Saccharomyces cerevisiae due to mitochondrial complex III deficiency. Biogerontology 26(2):91 PMID: 40208436
      • SGD Paper
      • DOI full text
      • PMC full text
      • PubMed
      9 Associated Entities: NDE2 | ATP1 | COX6 | HAP1 | NDE1 | ATG33 | ATG8 | SDH2 | Mitochondrial respiratory chain complex III ... Show all Show fewer

    • Simmons S, et al. (2025) A Saccharomyces cerevisiae knockout screen for genes critical for growth under sulfur- and nitrogen-limited conditions reveals intracellular sorting via vesicular transport systems. G3 (Bethesda) PMID: 40205732
      • SGD Paper
      • DOI full text
      • PubMed
    • Khan MI and Polturak G (2025) Biotechnological production and emerging applications of betalains: A review. Biotechnol Adv 81:108576 PMID: 40204005
      • SGD Paper
      • DOI full text
      • PubMed
    • da Mata AMOF, et al. (2025) Protective effects of ascorbic acid against anticancer drug-induced oxidative stress and genotoxic damage in <i>Saccharomyces cerevisiae</i>. 3 Biotech 15(5):118 PMID: 40206055
      • SGD Paper
      • DOI full text
      • PMC full text
      • PubMed
    • Guo B, et al. (2025) Adaptively Evolved and Multiplexed Engineered <i>Saccharomyces cerevisiae</i> for Neutralizer-Free Production of l-Lactic Acid. J Agric Food Chem 73(15):9009-9018 PMID: 40191959
      • SGD Paper
      • DOI full text
      • PubMed
      14 Associated Entities: NDE2 | HXK1 | GDH2 | HXT7 | PDC6 | CDC19 | JEN1 | PFK1 | CYB2 | ... Show all ADH2 | GDH1 | PDC5 | PDC1 | NDE1 Show fewer

    • Ghadanian T, et al. (2025) Selective Translation Under Heat Shock: Integrating HSP70 mRNA Regulation with Cellular Stress Responses in Yeast and Mammals. Mol Biol Cell 36(5):re2 PMID: 40198146
      • SGD Paper
      • DOI full text
      • PubMed
      16 Associated Entities: SSA1 | TIF1 | TIF2 | SSA4 | SSB1 | PAB1 | SSC1 | SSA3 | TIF4632 | ... Show all TIF4631 | RPS19B | SSB2 | RPS28A | CDC33 | SSA2 | Eukaryotic translation initiation factor 3 core complex Show fewer

    • Moyo NP, et al. (2025) Recovery of Sustainable Yeast Proteins: A Mechanistic Study of Autolysis and Enzyme Proteolysis as Pretreatments for Mechanical Cell Rupture. J Agric Food Chem 73(15):9197-9209 PMID: 40190058
      • SGD Paper
      • DOI full text
      • PubMed
    • Alvarado Cartagena YM, et al. (2025) First responder to starvation: microreticulophagy clears aberrant membrane proteins in quick bites. Autophagy 1-3 PMID: 40170551
      • SGD Paper
      • DOI full text
      • PubMed
      2 Associated Entities: SSH4 | RSP5 ... Show all Show fewer

    • Amiama-Roig A, et al. (2025) A Rfa1-MN-based system reveals new factors involved in the rescue of broken replication forks. PLoS Genet 21(4):e1011405 PMID: 40168399
      • SGD Paper
      • DOI full text
      • PMC full text
      • PubMed
      5 Associated Entities: RFA1 | RAD51 | DUN1 | YEN1 | MUS81 ... Show all Show fewer

    • König C, et al. (2025) Vps41 functions as a molecular ruler for HOPS tethering complex-mediated membrane fusion. J Cell Sci 138(8) PMID: 40159992
      • SGD Paper
      • DOI full text
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      3 Associated Entities: VPS41 | YPT7 | HOPS tethering complex ... Show all Show fewer

    • Ficarro SB, et al. (2025) Leveraging HILIC/ERLIC separations for online nanoscale LC-MS/MS analysis of phosphopeptide isoforms from RNA polymerase II C-terminal domain. J Chromatogr B Analyt Technol Biomed Life Sci 1257:124560 PMID: 40158465
      • SGD Paper
      • DOI full text
      • PubMed
      2 Associated Entities: KIN28 | RPO21 ... Show all Show fewer

    • Gupta N, et al. (2025) Distinct uS11/Rps14 interactions with the translation preinitiation complex differentially alter the accuracy of start codon recognition. Nucleic Acids Res 53(6) PMID: 40156863
      • SGD Paper
      • DOI full text
      • PMC full text
      • PubMed
      6 Associated Entities: RPS14B | RPS14A | SUI2 | GCD11 | SUI3 | Eukaryotic translation initiation factor 2 complex ... Show all Show fewer

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