RM11-1a is a haploid derivative of RM11, which is a diploid derivative of Bb32(3),which is an ascus derived from Bb32, which is a natural isolate collected by Robert Mortimer from a California vineyard (Ravenswood Zinfandel) in 1993. It has high spore viability (80-90%) and has been extensively characterized phenotypically under a wide range of conditions. It has a significantly longer life span than typical lab yeast strains and accumulates age-associated abnormalities at a lower rate.
Genome sequence information for a particular strain, including GenBank accession IDs and assembly statistics. The table below lists all contigs included in the genome, listed by GenBank accession, with information regarding where that contig maps to the S288C Reference Genome. Note that only the single best BLAST hit for each contig is shown, based on highest bit score from a pairwise BLAST of the genome against S288C using NCBI’s Genome BLAST tool.
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| Contig ID | Best BLAST Hit to S288C Reference Genome | % Identity | Alignment Length |
|---|---|---|---|
| JRIP01000001.1 | chrXVI:484854..536749 | 99.15 | 51985 |
| JRIP01000002.1 | chrX:355498..366895 | 99.15 | 11403 |
| JRIP01000004.1 | chrXV:200238..123630 | 99.27 | 76620 |
| JRIP01000005.1 | chrXIII:837684..822633 | 99.79 | 15052 |
| JRIP01000006.1 | chrXII:48560..41224 | 99.95 | 7337 |
| JRIP01000008.1 | chrIV:569005..592555 | 99.39 | 23576 |
| JRIP01000009.1 | chrX:727243..715021 | 99.5 | 12230 |
| JRIP01000010.1 | chrIX:436158..435287 | 83.87 | 874 |
| JRIP01000011.1 | chrXI:202984..302398 | 99.31 | 99489 |
| JRIP01000012.1 | chrXIII:599864..550550 | 99.4 | 49317 |