Reference: Pokrzywa W, et al. (2009) Dual sorting of the Saccharomyces cerevisiae vacuolar protein Sna4p. Eukaryot Cell 8(3):278-86

Reference Help

Abstract


Sna4p, a vacuolar membrane protein, belongs to a small family of proteins conserved in plants and fungi. It is transported to the vacuolar membrane via the alkaline phosphatase (ALP) pathway, which bypasses the multivesicular bodies (MVBs). Here, we show that transfer of Sna4p by the ALP route involves the AP-3 adaptor protein complex, which binds to an acidic dileucine sorting signal in the cytoplasmic region of Sna4p. In addition, Sna4p can use the MVB pathway by using a PPPY motif, which is involved in the interaction with ubiquitin ligase Rsp5p. Deletion or mutation of the Sna4p PPPY motif or a low level of Rsp5p inhibits the entrance of Sna4p into MVBs. Sna4p is polyubiquitylated on its only lysine, and Sna4p lacking this lysine shows defective MVB sorting. These data indicate that Sna4p has two functional motifs, one for interaction with the AP-3 complex, followed by entry into the ALP pathway, and one for binding Rsp5p, which directs the protein to the MVB pathway. The presence of these two motifs allows Sna4p to localize to both the vacuolar membrane and the lumen.

Reference Type
Journal Article | Research Support, Non-U.S. Gov't
Authors
Pokrzywa W, Guerriat B, Dodzian J, Morsomme P
Primary Lit For
SNA4
Additional Lit For
RSP5

Gene Ontology Annotations 3 entries for 1 gene


Increase the total number of rows showing on this page using the pull-down located below the table, or use the page scroll at the table's top right to browse through the table's pages; use the arrows to the right of a column header to sort by that column; filter the table using the "Filter" box at the top of the table.

Gene/ComplexQualifierGene Ontology TermAnnotation ExtensionEvidenceSourceAssigned On
SNA4located infungal-type vacuole membraneIMPSGD2013-08-07
SNA4located infungal-type vacuole lumenIDASGD2013-08-07
SNA4located infungal-type vacuole lumenIMPSGD2013-08-07
Showing 1 to 3 of 3 entries

Regulation Annotations 1 entry for 2 genes


Increase the total number of rows displayed on this page using the pull-down located below the table, or use the page scroll at the table's top right to browse through the table's pages; use the arrows to the right of a column header to sort by that column; to filter the table by a specific experiment type, type a keyword into the Filter box (for example, “microarray”); download this table as a .txt file using the Download button or click Analyze to further view and analyze the list of target genes using GO Term Finder, GO Slim Mapper, or SPELL.

RegulatorTargetDirectionRegulation OfHappens DuringMethodEvidence
RSP5SNA4protein stabilityhigh-throughputexperimental evidence
Showing 1 to 1 of 1 entries

Post-translational Modifications1 entry for 1 site


Increase the total number of rows showing on this page by using the pull-down located below the table, or use the page scroll at the table's top right to browse through its pages; use the arrows to the right of a column header to sort by that column; filter the table using the "Filter" box at the top of the table.

ProteinSiteModificationModifier
SNA4K128ubiquitinylated lysineRSP5
Showing 1 to 1 of 1 entries

Interaction Annotations


Genetic Interactions

Increase the total number of rows showing on this page by using the pull-down located below the table, or use the page scroll at the table's top right to browse through the table's pages; use the arrows to the right of a column header to sort by that column; filter the table using the "Filter" box at the top of the table; click on the small "i" buttons located within a cell for an annotation to view further details about experiment type and any other genes involved in the interaction.

Interactor Interactor Allele Assay Annotation Action Phenotype SGA score P-value Source Reference

Physical Interactions 1 entry for 2 genes

Increase the total number of rows showing on this page by using the pull-down located below the table, or use the page scroll at the table's top right to browse through the table's pages; use the arrows to the right of a column header to sort by that column; filter the table using the "Filter" box at the top of the table; click on the small "i" buttons located within a cell for an annotation to view further details about experiment type and any other genes involved in the interaction.

InteractorInteractorAssayAnnotationActionModification
RSP5SNA4Affinity Capture-Westernmanually curatedHit-BaitNo Modification
Showing 1 to 1 of 1 entries