Reference: Morlando M, et al. (2004) Coupling between snoRNP assembly and 3' processing controls box C/D snoRNA biosynthesis in yeast. EMBO J 23(12):2392-401

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Abstract


RNA polymerase II transcribes genes encoding proteins and a large number of small stable RNAs. While pre-mRNA 3'-end formation requires a machinery ensuring tight coupling between cleavage and polyadenylation, small RNAs utilize polyadenylation-independent pathways. In yeast, specific factors required for snRNA and snoRNA 3'-end formation were characterized as components of the APT complex that is associated with the core complex of the cleavage/polyadenylation machinery (core-CPF). Other essential factors were identified as independent components: Nrd1p, Nab3p and Sen1p. Here we report that mutations in the conserved box D of snoRNAs and in the snoRNP-specific factor Nop1p interfere with transcription and 3'-end formation of box C/D snoRNAs. We demonstrate that Nop1p is associated with box C/D snoRNA genes and that it interacts with APT components. These data suggest a mechanism of quality control in which efficient transcription and 3'-end formation occur only when nascent snoRNAs are successfully assembled into functional particles.

Reference Type
Journal Article | Research Support, Non-U.S. Gov't
Authors
Morlando M, Ballarino M, Greco P, Caffarelli E, Dichtl B, Bozzoni I
Primary Lit For
NOP1 | NAB3 | DNA-directed RNA polymerase II complex | Box C/D snoRNP complex
Additional Lit For
SNR13 | NRD1 | SNR50 | SEN1 | SNR71

Gene Ontology Annotations 2 entries for 2 genes


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Gene/ComplexQualifierGene Ontology TermAnnotation ExtensionEvidenceSourceAssigned On
Box C/D snoRNP complexinvolved inbox C/D sno(s)RNA 3'-end processingIDAComplexPortal2017-11-14
NOP1involved inbox C/D sno(s)RNA 3'-end processingIMPSGD2013-08-07
Showing 1 to 2 of 2 entries

Interaction Annotations


Genetic Interactions

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Interactor Interactor Allele Assay Annotation Action Phenotype SGA score P-value Source Reference

Physical Interactions 2 entries for 3 genes

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InteractorInteractorAssayAnnotationActionModification
NOP1SSU72Affinity Capture-Westernmanually curatedBait-HitNo Modification
NOP1REF2Affinity Capture-Westernmanually curatedBait-HitNo Modification
Showing 1 to 2 of 2 entries