Replication factor C is required to load proliferating cell nuclear antigen onto primer-template junctions, using the energy of ATP hydrolysis. Four of the five RFC genes have consensus ATP-binding motifs. To determine the relative importance of these sites for proper DNA metabolism in the cell, the conserved lysine in the Walker A motif of RFC1, RFC2, RFC3, or RFC4 was mutated to either arginine or glutamic acid. Arginine mutations in all RFC genes tested permitted cell growth, although poor growth was observed for rfc2-K71R. A glutamic acid substitution resulted in lethality in RFC2 and RFC3 but not in RFC1 or RFC4. Most double mutants combining mutations in two RFC genes were inviable. Except for the rfc1-K359R and rfc4-K55E mutants, which were phenotypically similar to wild type in every assay, the mutants were sensitive to DNA-damaging agents. The rfc2-K71R and rfc4-K55R mutants show checkpoint defects, most likely in the intra-S phase checkpoint. Regulation of the damage-inducible RNR3 promoter was impaired in these mutants, and phosphorylation of Rad53p in response to DNA damage was specifically defective when cells were in S phase. No dramatic defects in telomere length regulation were detected in the mutants. These data demonstrate that the ATP binding function of RFC2 is important for both DNA replication and checkpoint function and, for the first time, that RFC4 also plays a role in checkpoint regulation.
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Gene | Phenotype | Experiment Type | Mutant Information | Strain Background | Chemical | Details |
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RFC4 | cold sensitivity: increased | classical genetics | conditional Allele: rfc4R K55R | W303 | ||
RFC2 | resistance to chemicals: decreased | classical genetics | reduction of function Allele: rfc2R K71R | W303 | 0.02% methyl methanesulfonate | |
RFC2 | resistance to chemicals: decreased | classical genetics | reduction of function Allele: rfc2R K71R | W303 | 110 mM hydroxyurea | |
RFC4 | resistance to chemicals: decreased | classical genetics | conditional Allele: rfc4R K55R | W303 | 0.02% methyl methanesulfonate | Temperature: permissive temperature, 30 °C |
RFC4 | resistance to chemicals: decreased | classical genetics | conditional Allele: rfc4R K55R | W303 | 110 mM hydroxyurea | Temperature: permissive temperature, 30 °C |
RFC2 | UV resistance: decreased | classical genetics | reduction of function Allele: rfc2R K71R | W303 | Details: 100 J/m2 | |
RFC4 | UV resistance: decreased | classical genetics | conditional Allele: rfc4R K55R | W303 | Temperature: permissive temperature, 30 °C Details: 100 J/m2 | |
RFC2 | vegetative growth: decreased rate | classical genetics | reduction of function Allele: rfc2R K71R | W303 |
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Evidence ID | Analyze ID | Interactor | Interactor Systematic Name | Interactor | Interactor Systematic Name | Allele | Assay | Annotation | Action | Phenotype | SGA score | P-value | Source | Reference | Note |
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Increase the total number of rows showing on this page by using the pull-down located below the table, or use the page scroll at the table's top right to browse through the table's pages; use the arrows to the right of a column header to sort by that column; filter the table using the "Filter" box at the top of the table; click on the small "i" buttons located within a cell for an annotation to view further details about experiment type and any other genes involved in the interaction.
Evidence ID | Analyze ID | Interactor | Interactor Systematic Name | Interactor | Interactor Systematic Name | Assay | Annotation | Action | Modification | Source | Reference | Note |
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