Reference: Fahrenkrog B, et al. (2000) The yeast nucleoporin Nup53p specifically interacts with Nic96p and is directly involved in nuclear protein import. Mol Biol Cell 11(11):3885-96

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Abstract


The bidirectional nucleocytoplasmic transport of macromolecules is mediated by the nuclear pore complex (NPC) which, in yeast, is composed of approximately 30 different proteins (nucleoporins). Pre-embedding immunogold-electron microscopy revealed that Nic96p, an essential yeast nucleoporin, is located about the cytoplasmic and the nuclear periphery of the central channel, and near or at the distal ring of the yeast NPC. Genetic approaches further implicated Nic96p in nuclear protein import. To more specifically explore the potential role of Nic96p in nuclear protein import, we performed a two-hybrid screen with NIC96 as the bait against a yeast genomic library to identify transport factors and/or nucleoporins involved in nuclear protein import interacting with Nic96p. By doing so, we identified the yeast nucleoporin Nup53p, which also exhibits multiple locations within the yeast NPC and colocalizes with Nic96p in all its locations. Whereas Nup53p is directly involved in NLS-mediated protein import by its interaction with the yeast nuclear import receptor Kap95p, it appears not to participate in NES-dependent nuclear export.

Reference Type
Journal Article | Research Support, Non-U.S. Gov't
Authors
Fahrenkrog B, Hübner W, Mandinova A, Panté N, Keller W, Aebi U
Primary Lit For
NIC96 | NUP53 | Nuclear pore complex

Gene Ontology Annotations 4 entries for 1 gene


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Gene/ComplexQualifierGene Ontology TermAnnotation ExtensionEvidenceSourceAssigned On
NUP53part ofnuclear poreIDASGD2013-08-07
NUP53part ofnuclear pore nuclear basketIDASGD2013-08-07
NUP53involved inNLS-bearing protein import into nucleusIGI with KAP95SGD2013-08-07
NUP53involved inNLS-bearing protein import into nucleusIMPSGD2013-08-07
Showing 1 to 4 of 4 entries

Interaction Annotations


Genetic Interactions

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Interactor Interactor Allele Assay Annotation Action Phenotype SGA score P-value Source Reference

Physical Interactions 3 entries for 3 genes

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InteractorInteractorAssayAnnotationActionModification
KAP95NUP53Affinity Capture-Westernmanually curatedHit-BaitNo Modification
NIC96NUP53Affinity Capture-Westernmanually curatedHit-BaitNo Modification
NIC96NUP53Two-hybridmanually curatedBait-HitNo Modification
Showing 1 to 3 of 3 entries