Reference: Rho SB and Martinis SA (2000) The bI4 group I intron binds directly to both its protein splicing partners, a tRNA synthetase and maturase, to facilitate RNA splicing activity. RNA 6(12):1882-94

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Abstract


The imported mitochondrial leucyl-tRNA synthetase (NAM2p) and a mitochondrial-expressed intron-encoded maturase protein are required for splicing the fourth intron (bI4) of the yeast cob gene, which expresses an electron transfer protein that is essential to respiration. However, the role of the tRNA synthetase, as well as the function of the bI4 maturase, remain unclear. As a first step towards elucidating the mechanistic role of these protein splicing factors in this group I intron splicing reaction, we tested the hypothesis that both leucyl-tRNA synthetase and bI4 maturase interact directly with the bI4 intron. We developed a yeast three-hybrid system and determined that both the tRNA synthetase and bI4 maturase can bind directly and independently via RNA-protein interactions to the large bI4 group I intron. We also showed, using modified two-hybrid and three-hybrid assays, that the bI4 intron bridges interactions between the two protein splicing partners. In the presence of either the bI4 maturase or the Leu-tRNA synthetase, bI4 intron transcribed recombinantly with flanking exons in the yeast nucleus exhibited splicing activity. These data combined with previous genetic results are consistent with a novel model for a ternary splicing complex (two protein: one RNA) in which both protein splicing partners bind directly to the bI4 intron and facilitate its self-splicing activity.

Reference Type
Journal Article | Research Support, Non-U.S. Gov't
Authors
Rho SB, Martinis SA
Primary Lit For
BI4 | NAM2 | bI4 intron splicing factor complex
Additional Lit For
COB

Gene Ontology Annotations 4 entries for 2 genes


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Gene/ComplexQualifierGene Ontology TermAnnotation ExtensionEvidenceSourceAssigned On
BI4enablesRNA bindingIDASGD2013-08-07
BI4involved inGroup I intron splicingIDASGD2013-08-07
BI4involved inGroup I intron splicingIMPSGD2013-08-07
NAM2enablespre-mRNA intronic bindinghas input COBIPI with COBSGD2019-03-19
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Interaction Annotations


Genetic Interactions

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Interactor Interactor Allele Assay Annotation Action Phenotype SGA score P-value Source Reference

Physical Interactions 2 entries for 2 genes

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InteractorInteractorAssayAnnotationActionModification

in the presence of bI4 intron

NAM2BI4Two-hybridmanually curatedBait-HitNo Modification

three hybrid (RNA-protein)|two hybrid (protein-protein) in the presence of bI4 intron

NAM2BI4Two-hybridmanually curatedHit-BaitNo Modification
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