Rpn7 is one of the lid subunits of the 26 S proteasome regulatory particle. The RPN7 gene is known to be essential, but its function remains to be elucidated. To explore the function of Rpn7, we isolated and characterized temperature-sensitive rpn7 mutants. All of the rpn7 mutants obtained accumulated poly-ubiquitinated proteins when grown at the restrictive temperature. The N-end rule substrate (Ub-Arg-beta-galactosidase), the UFD pathway substrate (Ub-Pro-beta-galactosidase), and cell cycle regulators (Pds1 and Clb2) were found to be stabilized in experiments using one of the rpn7 mutants termed rpn7-3 at the restrictive temperature, indicating its defect in the ubiquitin-proteasome pathway. Subsequent analysis of the structure of the 26 S proteasome in rpn7-3 cells suggested that the defect was in the assembly of the 26 S holoenzyme. The most striking characteristic of the proteasome of the rpn7-3 mutant was that a lid subcomplex affinity-purified from the rpn7-3 cells grown at the restrictive temperature contained only 5 of the 8 lid components, a phenomenon that has not been reported in the previously isolated lid mutants. From these results, we concluded that Rpn7 is required for the integrity of the 26 S complex by establishing a correct lid structure.
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Gene | Phenotype | Experiment Type | Mutant Information | Strain Background | Chemical | Details |
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RPN7 | cell cycle progression through the G2/M phase transition: abnormal | classical genetics | conditional Allele: rpn7-3 D95G, K188R, S240P, S349P, D382G | W303 | Temperature: elevated temperature, 37 °C | |
RPN7 | cell size: increased | classical genetics | conditional Allele: rpn7-3 D95G, K188R, S240P, S349P, D382G | W303 | Temperature: elevated temperature, 37 °C Details: large, budded cells with one nucleus and short spindle | |
RPN7 | heat sensitivity: increased | classical genetics | conditional Allele: rpn7-6 Q143R, S240P, S273P, L368Q | W303 | Temperature: elevated temperature, 37 °C | |
RPN7 | heat sensitivity: increased | classical genetics | conditional Allele: rpn7-2 M197T, S240P, S303C, K336E | W303 | Temperature: elevated temperature, 37 °C | |
RPN7 | heat sensitivity: increased | classical genetics | conditional Allele: rpn7-3 D95G, K188R, S240P, S349P, D382G | W303 | Temperature: elevated temperature, 37 °C | |
RPN7 | heat sensitivity: increased | classical genetics | conditional Allele: rpn7-4 S240P, Y304H, F305S | W303 | Temperature: elevated temperature, 37 °C | |
RPN7 | heat sensitivity: increased | classical genetics | conditional Allele: rpn7-5 T164A, S240P, D265G, T347A, D367G | W303 | Temperature: elevated temperature, 37 °C | |
RPN7 | heat sensitivity: increased | classical genetics | conditional Allele: rpn7-1 S240P, Y304H, R334G | W303 | Temperature: elevated temperature, 37 °C | |
RPN7 | protein/peptide accumulation: increased Reporter: Clb2p | classical genetics | conditional Allele: rpn7-3 D95G, K188R, S240P, S349P, D382G | W303 | Temperature: elevated temperature, 37 °C Treatment: alpha-factor block release, 10 ug/ml | |
RPN7 | protein/peptide accumulation: increased Reporter: Pds1p | classical genetics | conditional Allele: rpn7-3 D95G, K188R, S240P, S349P, D382G | W303 | Temperature: elevated temperature, 37 °C Treatment: alpha-factor block release, 10 ug/ml |
Increase the total number of rows showing on this page by using the pull-down located below the table, or use the page scroll at the table's top right to browse through the table's pages; use the arrows to the right of a column header to sort by that column; filter the table using the "Filter" box at the top of the table; click on the small "i" buttons located within a cell for an annotation to view further details about experiment type and any other genes involved in the interaction.
Evidence ID | Analyze ID | Interactor | Interactor Systematic Name | Interactor | Interactor Systematic Name | Allele | Assay | Annotation | Action | Phenotype | SGA score | P-value | Source | Reference | Note |
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Increase the total number of rows showing on this page by using the pull-down located below the table, or use the page scroll at the table's top right to browse through the table's pages; use the arrows to the right of a column header to sort by that column; filter the table using the "Filter" box at the top of the table; click on the small "i" buttons located within a cell for an annotation to view further details about experiment type and any other genes involved in the interaction.
Interactor | Interactor | Assay | Annotation | Action | Modification | |
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rpn7-3 background | RPN11 | RPN5 | Affinity Capture-MS | manually curated | Hit-Bait | No Modification |
rpn7-3 background | RPN11 | RPN6 | Affinity Capture-MS | manually curated | Hit-Bait | No Modification |
rpn7-3 background | RPN11 | RPN8 | Affinity Capture-MS | manually curated | Hit-Bait | No Modification |
rpn7-3 background | RPN11 | RPN9 | Affinity Capture-MS | manually curated | Hit-Bait | No Modification |
rpn7-3 background | RPN5 | RPN8 | Affinity Capture-MS | manually curated | Bait-Hit | No Modification |
rpn7-3 background | RPN5 | RPN9 | Affinity Capture-MS | manually curated | Bait-Hit | No Modification |
rpn7-3 background | RPN6 | RPN5 | Affinity Capture-MS | manually curated | Hit-Bait | No Modification |
rpn7-3 background | RPN6 | RPN8 | Affinity Capture-MS | manually curated | Bait-Hit | No Modification |
rpn7-3 background | RPN6 | RPN9 | Affinity Capture-MS | manually curated | Bait-Hit | No Modification |
rpn7-3 background | RPN9 | RPN8 | Affinity Capture-MS | manually curated | Hit-Bait | No Modification |