PDB Homolog: USV1/YPL230W Help



This page presents information for the proteins of known structure with sequence similarity to the Saccharomyces cerevisiae protein USV1/YPL230W. The analysis was performed by comparing yeast protein sequences against protein sequences in The RCSB Protein Databank (PDB) using WU-BLAST.
 
Last updated on 2016-09-15

86 PDB homolog(s) found for yeast gene USV1/YPL230W

USV1/YPL230W links
  • Locus Info
  • PDB protein structure(s) homologous to USV1Homolog Source (per PDB)Protein Alignment: USV1 vs. HomologExternal Links
    P-Value%Identical%SimilarAlignment
    2EBT ( Chain: A)
    Solution Structure Of Three Tandem Repeats Of Zf-C2h2 Domains From Human Kruppel-Like Factor 5
  • PDB_Info
  • PDB_Structure
  • Homo sapiens8.2e-114915View alignmentSCOP
    MMDB
    CATH
    2WBU ( Chain: A)
    Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna
  • PDB_Info
  • PDB_Structure
  • Mus musculus1.6e-095013View alignmentSCOP
    MMDB
    CATH
    2WBS ( Chain: A)
    Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna
  • PDB_Info
  • PDB_Structure
  • Mus musculus1.6e-095013View alignmentSCOP
    MMDB
    CATH
    2PRT ( Chain: A)
    Structure Of The Wilms Tumor Suppressor Protein Zinc Finger Domain Bound To Dna
  • PDB_Info
  • PDB_Structure
  • Homo sapiens1.6e-094013View alignmentSCOP
    MMDB
    CATH
    2JP9 ( Chain: A)
    Structure Of The Wilms Tumor Suppressor Protein Zinc Finger Domain Bound To Dna
  • PDB_Info
  • PDB_Structure
  • Homo sapiens1.6e-094013View alignmentSCOP
    MMDB
    CATH
    2JPA ( Chain: A)
    Structure Of The Wilms Tumor Suppressor Protein Zinc Finger Domain Bound To Dna
  • PDB_Info
  • PDB_Structure
  • Homo sapiens1.6e-094013View alignmentSCOP
    MMDB
    CATH
    4M9E ( Chain: A)
    Structure Of Klf4 Zinc Finger Dna Binding Domain In Complex With Methylated Dna
  • PDB_Info
  • PDB_Structure
  • Mus musculus1.6e-095013View alignmentSCOP
    MMDB
    CATH
    1LLM ( Chain: D, C)
    Crystal Structure Of A Zif23-Gcn4 Chimera Bound To Dna
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae S288cChain D = 2.7e-094716View alignmentSCOP
    MMDB
    CATH
    Chain C = 2.7e-094716View alignment
    2GLI ( Chain: A)
    Five-Finger GliDNA COMPLEX
  • PDB_Info
  • PDB_Structure
  • Homo sapiens5.9e-094021View alignmentSCOP
    MMDB
    CATH
    4R2R ( Chain: A)
    Wilms Tumor Protein (wt1) Zinc Fingers In Complex With Carboxylated Dna
  • PDB_Info
  • PDB_Structure
  • Homo sapiens7.5e-095015View alignmentSCOP
    MMDB
    CATH
    4R2E ( Chain: A)
    Wilms Tumor Protein (wt1) Zinc Fingers In Complex With Methylated Dna
  • PDB_Info
  • PDB_Structure
  • Homo sapiens7.5e-095015View alignmentSCOP
    MMDB
    CATH
    4R2P ( Chain: A)
    Wilms Tumor Protein (wt1) Zinc Fingers In Complex With Hydroxymethylated Dna
  • PDB_Info
  • PDB_Structure
  • Homo sapiens7.5e-095015View alignmentSCOP
    MMDB
    CATH
    4R2Q ( Chain: A)
    Wilms Tumor Protein (wt1) Zinc Fingers In Complex With Formylated Dna
  • PDB_Info
  • PDB_Structure
  • Homo sapiens7.5e-095015View alignmentSCOP
    MMDB
    CATH
    1F2I ( Chain: K, L, H, I, J)
    Cocrystal Structure Of Selected Zinc Finger Dimer Bound To Dna
  • PDB_Info
  • PDB_Structure
  • Mus musculusChain K = 9.7e-094421View alignmentSCOP
    MMDB
    CATH
    Chain L = 9.7e-094421View alignment
    Chain H = 9.7e-094421View alignment
    Chain I = 9.7e-094421View alignment
    Chain J = 9.7e-094421View alignment
    4R2S ( Chain: A)
    Wilms Tumor Protein (wt1) Q369p Zinc Fingers In Complex With Methylated Dna
  • PDB_Info
  • PDB_Structure
  • Homo sapiens1.2e-085015View alignmentSCOP
    MMDB
    CATH
    1ZAA ( Chain: C)
    Zinc Finger-Dna Recognition: Crystal Structure Of A Zif268- Dna Complex At 2.1 Angstroms
  • PDB_Info
  • PDB_Structure
  • Mus musculus1.2e-084619View alignmentSCOP
    MMDB
    CATH
    1P47 ( Chain: B, A)
    Crystal Structure Of Tandem Zif268 Molecules Complexed To Dna
  • PDB_Info
  • PDB_Structure
  • Mus musculusChain B = 1.2e-084619View alignmentSCOP
    MMDB
    CATH
    Chain A = 1.2e-084619View alignment
    1A1L ( Chain: A)
    Zif268 Zinc Finger-Dna Complex (Gcac Site)
  • PDB_Info
  • PDB_Structure
  • Mus musculus1.2e-084619View alignmentSCOP
    MMDB
    CATH
    1AAY ( Chain: A)
    Zif268 Zinc Finger-Dna Complex
  • PDB_Info
  • PDB_Structure
  • Mus musculus1.2e-084619View alignmentSCOP
    MMDB
    CATH
    4R2D ( Chain: A)
    Egr1/zif268 Zinc Fingers In Complex With Formylated Dna
  • PDB_Info
  • PDB_Structure
  • Homo sapiens1.2e-084619View alignmentSCOP
    MMDB
    CATH
    4R2C ( Chain: A)
    Egr1/zif268 Zinc Fingers In Complex With Hydroxymethylated Dna
  • PDB_Info
  • PDB_Structure
  • Homo sapiens1.2e-084619View alignmentSCOP
    MMDB
    CATH
    4X9J ( Chain: A)
    Egr-1 With Doubly Methylated Dna
  • PDB_Info
  • PDB_Structure
  • Homo sapiens1.2e-084619View alignmentSCOP
    MMDB
    CATH
    4R2A ( Chain: A)
    Egr1/zif268 Zinc Fingers In Complex With Methylated Dna
  • PDB_Info
  • PDB_Structure
  • Homo sapiens1.2e-084619View alignmentSCOP
    MMDB
    CATH
    2ADR ( Chain: A)
    Adr1 Dna-Binding Domain From Saccharomyces Cerevisiae, Nmr, 25 Structures
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae1.5e-084817View alignmentSCOP
    MMDB
    CATH
    1JK2 ( Chain: A)
    Zif268 D20a Mutant Bound To The Gct Dna Site
  • PDB_Info
  • PDB_Structure
  • Mus musculus2.0e-084519View alignmentSCOP
    MMDB
    CATH
    1A1I ( Chain: A)
    Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site)
  • PDB_Info
  • PDB_Structure
  • Mus musculus2.0e-084519View alignmentSCOP
    MMDB
    CATH
    1A1J ( Chain: A)
    Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcgt Site)
  • PDB_Info
  • PDB_Structure
  • Mus musculus2.0e-084519View alignmentSCOP
    MMDB
    CATH
    1A1H ( Chain: A)
    Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site)
  • PDB_Info
  • PDB_Structure
  • Mus musculus2.0e-084519View alignmentSCOP
    MMDB
    CATH
    1A1F ( Chain: A)
    Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc Site)
  • PDB_Info
  • PDB_Structure
  • Mus musculus2.0e-084519View alignmentSCOP
    MMDB
    CATH
    1A1G ( Chain: A)
    Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gcgt Site)
  • PDB_Info
  • PDB_Structure
  • Mus musculus2.0e-084519View alignmentSCOP
    MMDB
    CATH
    1JK1 ( Chain: A)
    Zif268 D20a Mutant Bound To Wt Dna Site
  • PDB_Info
  • PDB_Structure
  • Mus musculus2.0e-084519View alignmentSCOP
    MMDB
    CATH
    1A1K ( Chain: A)
    Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc Site)
  • PDB_Info
  • PDB_Structure
  • Mus musculus2.0e-084519View alignmentSCOP
    MMDB
    CATH
    2I13 ( Chain: A, B)
    Aart, A Six Finger Zinc Finger Designed To Recognize Ann Triplets
  • PDB_Info
  • PDB_Structure
  • Mus musculusChain A = 1.3e-075314View alignmentSCOP
    MMDB
    CATH
    Chain B = 1.3e-075314View alignment
    2EPA ( Chain: A)
    Solution Structure Of The First And Second Zf-C2h2 Domains From Human Krueppel-Like Factor 10
  • PDB_Info
  • PDB_Structure
  • Homo sapiens1.9e-073623View alignmentSCOP
    MMDB
    CATH
    1UBD ( Chain: C)
    Co-Crystal Structure Of Human Yy1 Zinc Finger Domain Bound To The Adeno-Associated Virus P5 Initiator Element
  • PDB_Info
  • PDB_Structure
  • Homo sapiens6.8e-073918View alignmentSCOP
    MMDB
    CATH
    2RPC ( Chain: A)
    Solution Structure Of The Tandem Zf-C2h2 Domains From The Human Zinc Finger Protein Zic 3
  • PDB_Info
  • PDB_Structure
  • Homo sapiens2.4e-063915View alignmentSCOP
    MMDB
    CATH
    1TF3 ( Chain: A)
    Tfiiia Finger 1-3 Bound To Dna, Nmr, 22 Structures
  • PDB_Info
  • PDB_Structure
  • Xenopus laevis3.1e-064111View alignmentSCOP
    MMDB
    CATH
    2COT ( Chain: A)
    Solution Structure Of The First And Second Zf-C2h2 Domain Of Zinc Finger Protein 435
  • PDB_Info
  • PDB_Structure
  • Homo sapiens3.1e-064118View alignmentSCOP
    MMDB
    CATH
    1G2D ( Chain: F, C)
    Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (CLONE #2)
  • PDB_Info
  • PDB_Structure
  • Mus musculusChain F = 3.1e-064020View alignmentSCOP
    MMDB
    CATH
    Chain C = 3.1e-064020View alignment
    2DLQ ( Chain: A)
    Solution Structure Of The Tandem Four Zf-C2h2 Domain Repeats Of Murine Gli-Kruppel Family Member Hkr3
  • PDB_Info
  • PDB_Structure
  • Mus musculus3.1e-065012View alignmentSCOP
    MMDB
    CATH
    2EE8 ( Chain: A)
    Solution Structure Of Three Zf-C2h2 Domains From Mouse Protein Odd-Skipped-Related 2 Splicing Isoform 2
  • PDB_Info
  • PDB_Structure
  • Mus musculus5.0e-063717View alignmentSCOP
    MMDB
    CATH
    2N25 ( Chain: A)
    Solution Structure Of Miz-1 Zinc Finger 2
  • PDB_Info
  • PDB_Structure
  • Homo sapiens6.4e-06456View alignmentSCOP
    MMDB
    CATH
    2N26 ( Chain: A)
    Solution Structure Of Miz-1 Zinc Fingers 3 And 4
  • PDB_Info
  • PDB_Structure
  • Homo sapiens6.4e-06456View alignmentSCOP
    MMDB
    CATH
    2LCE ( Chain: A)
    Chemical Shift Assignment Of Hr4436b From Homo Sapiens, Northeast Structural Genomics Consortium
  • PDB_Info
  • PDB_Structure
  • Homo sapiens6.4e-064312View alignmentSCOP
    MMDB
    CATH
    1G2F ( Chain: C, F)
    Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (Tatazf;clone #6)
  • PDB_Info
  • PDB_Structure
  • Mus musculusChain C = 1.0e-053822View alignmentSCOP
    MMDB
    CATH
    Chain F = 1.0e-053822View alignment
    2YT9 ( Chain: A)
    Solution Structure Of C2h2 Type Zinc Finger Domain 345 In Zinc Finger Protein 278
  • PDB_Info
  • PDB_Structure
  • Homo sapiens1.8e-053117View alignmentSCOP
    MMDB
    CATH
    2LVT ( Chain: A)
    Solution Structure Of Miz-1 Zinc Finger 9
  • PDB_Info
  • PDB_Structure
  • Homo sapiens2.9e-054515View alignmentSCOP
    MMDB
    CATH
    2LVU ( Chain: A)
    Solution Structure Of Miz-1 Zinc Finger 10
  • PDB_Info
  • PDB_Structure
  • Homo sapiens2.9e-054515View alignmentSCOP
    MMDB
    CATH
    2LVR ( Chain: A)
    Solution Structure Of Miz-1 Zinc Finger 8
  • PDB_Info
  • PDB_Structure
  • Homo sapiens2.9e-054515View alignmentSCOP
    MMDB
    CATH
    1X6E ( Chain: A)
    Solution Structures Of The C2h2 Type Zinc Finger Domain Of Human Zinc Finger Protein 24
  • PDB_Info
  • PDB_Structure
  • Homo sapiens6.0e-054319View alignmentSCOP
    MMDB
    CATH
    3W5K ( Chain: B)
    Crystal Structure Of Snail1 And Importin Beta Complex
  • PDB_Info
  • PDB_Structure
  • Homo sapiens6.6e-053412View alignmentSCOP
    MMDB
    CATH
    2CSH ( Chain: A)
    Solution Structure Of Tandem Repeat Of The Zf-C2h2 Domains Of Human Zinc Finger Protein 297b
  • PDB_Info
  • PDB_Structure
  • Homo sapiens7.7e-053214View alignmentSCOP
    MMDB
    CATH
    2LT7 ( Chain: A)
    Solution Nmr Structure Of Kaiso Zinc Finger Dna Binding Domain In Complex With Kaiso Binding Site Dna
  • PDB_Info
  • PDB_Structure
  • Homo sapiens0.0002103215View alignmentSCOP
    MMDB
    CATH
    4F6M ( Chain: A)
    Crystal Structure Of Kaiso Zinc Finger Dna Binding Domain In Complex With Kaiso Binding Site Dna
  • PDB_Info
  • PDB_Structure
  • Homo sapiens0.0002103215View alignmentSCOP
    MMDB
    CATH
    4F6N ( Chain: A)
    Crystal Structure Of Kaiso Zinc Finger Dna Binding Protein In Complex With Methylated Cpg Site Dna
  • PDB_Info
  • PDB_Structure
  • Homo sapiens0.0002103215View alignmentSCOP
    MMDB
    CATH
    1TF6 ( Chain: D, A)
    Co-crystal Structure Of Xenopus Tfiiia Zinc Finger Domain Bound To The 5s Ribosomal Rna Gene Internal Control Region
  • PDB_Info
  • PDB_Structure
  • Xenopus laevisChain D = 0.0003204011View alignmentSCOP
    MMDB
    CATH
    Chain A = 0.0003204011View alignment
    2M0E ( Chain: A)
    Solution Structure Of Miz-1 Zinc Finger 6
  • PDB_Info
  • PDB_Structure
  • Homo sapiens0.0003493717View alignmentSCOP
    MMDB
    CATH
    2M0D ( Chain: A)
    Solution Structure Of Miz-1 Zinc Finger 5
  • PDB_Info
  • PDB_Structure
  • Homo sapiens0.0003493717View alignmentSCOP
    MMDB
    CATH
    2M0F ( Chain: A)
    Solution Structure Of Miz-1 Zinc Finger 7
  • PDB_Info
  • PDB_Structure
  • Homo sapiens0.0003493717View alignmentSCOP
    MMDB
    CATH
    5EI9 ( Chain: E, F)
    Human Prdm9 Allele-a Znf Domain With Associated Recombination Hotspot Dna Sequence I
  • PDB_Info
  • PDB_Structure
  • Homo sapiensChain E = 0.0007004016View alignmentSCOP
    MMDB
    CATH
    Chain F = 0.0007004016View alignment
    5EH2 ( Chain: F, E)
    Human Prdm9 Allele-a Znf Domain With Associated Recombination Hotspot Dna Sequence Iii
  • PDB_Info
  • PDB_Structure
  • Homo sapiensChain F = 0.0007004016View alignmentSCOP
    MMDB
    CATH
    Chain E = 0.0007004016View alignment
    5EGB ( Chain: A)
    Human Prdm9 Allele-a Znf Domain With Associated Recombination Hotspot Dna Sequence Ii
  • PDB_Info
  • PDB_Structure
  • Homo sapiens0.0007004016View alignmentSCOP
    MMDB
    CATH
    2J7J ( Chain: A)
    Invariance Of The Zinc Finger Module: A Comparison Of The Free Structure With Those In Nucleic-Acid Complexes
  • PDB_Info
  • PDB_Structure
  • Xenopus laevis0.0015993815View alignmentSCOP
    MMDB
    CATH
    1UN6 ( Chain: B, D, C)
    The Crystal Structure Of A Zinc Finger - Rna Complex Reveals Two Modes Of Molecular Recognition
  • PDB_Info
  • PDB_Structure
  • Xenopus laevisChain B = 0.0015993815View alignmentSCOP
    MMDB
    CATH
    Chain D = 0.0015993815View alignment
    Chain C = 0.0015993815View alignment
    2HGH ( Chain: A)
    Transcription Factor Iiia Zinc Fingers 4-6 Bound To 5s Rrna 55mer (Nmr Structure)
  • PDB_Info
  • PDB_Structure
  • Xenopus laevis0.0015993815View alignmentSCOP
    MMDB
    CATH
    2MA7 ( Chain: A)
    Solution Nmr Structure Of Zinc Finger Protein Eos From Homo Sapiens, Northeast Structural Genomics Consortium (nesg) Target Hr7992a
  • PDB_Info
  • PDB_Structure
  • Homo sapiens0.0026004716View alignmentSCOP
    MMDB
    CATH
    2ENT ( Chain: A)
    Solution Structure Of The Second C2h2-Type Zinc Finger Domain From Human Krueppel-Like Factor 15
  • PDB_Info
  • PDB_Structure
  • Homo sapiens0.0026004415View alignmentSCOP
    MMDB
    CATH
    2RSJ ( Chain: A)
    Solution Structures Of The Dna-binding Domains Of Immune-related Zinc- Finger Protein Zfat
  • PDB_Info
  • PDB_Structure
  • Homo sapiens0.0026003710View alignmentSCOP
    MMDB
    CATH
    2RV6 ( Chain: A)
    Solution Structures Of The Dna-binding Domains (zf2-zf3-zf4) Of Immune-related Zinc-finger Protein Zfat
  • PDB_Info
  • PDB_Structure
  • Homo sapiens0.0026003710View alignmentSCOP
    MMDB
    CATH
    1P7A ( Chain: A)
    Solution Stucture Of The Third Zinc Finger From Bklf
  • PDB_Info
  • PDB_Structure
  • Mus musculus0.0032995910View alignmentSCOP
    MMDB
    CATH
    4GZN ( Chain: C)
    Mouse Zfp57 Zinc Fingers In Complex With Methylated Dna
  • PDB_Info
  • PDB_Structure
  • Mus musculus0.0041983616View alignmentSCOP
    MMDB
    CATH
    4M9V ( Chain: C, F)
    Zfp57 Mutant (e182q) In Complex With 5-carboxylcytosine Dna
  • PDB_Info
  • PDB_Structure
  • Mus musculusChain C = 0.0041983616View alignmentSCOP
    MMDB
    CATH
    Chain F = 0.0041983616View alignment
    2DRP ( Chain: D, A)
    The Crystal Structure Of A Two Zinc-Finger Peptide Reveals An Extension To The Rules For Zinc-FingerDNA RECOGNITION
  • PDB_Info
  • PDB_Structure
  • Drosophila melanogasterChain D = 0.0041983119View alignmentSCOP
    MMDB
    CATH
    Chain A = 0.0041983119View alignment
    4IS1 ( Chain: C, D)
    Crystal Structure Of Znf217 Bound To Dna
  • PDB_Info
  • PDB_Structure
  • Homo sapiensChain C = 0.0054013617View alignmentSCOP
    MMDB
    CATH
    Chain D = 0.0054013617View alignment
    4F2J ( Chain: C)
    Crystal Structure Of Znf217 Bound To Dna, P6522 Crystal Form
  • PDB_Info
  • PDB_Structure
  • Homo sapiens0.0054013617View alignmentSCOP
    MMDB
    CATH
    3UK3 ( Chain: D, C)
    Crystal Structure Of Znf217 Bound To Dna
  • PDB_Info
  • PDB_Structure
  • Homo sapiensChain D = 0.0054013617View alignmentSCOP
    MMDB
    CATH
    Chain C = 0.0054013617View alignment
    5IY6 ( Chain: A)
    Human Holo-pic In The Closed State
  • PDB_Info
  • PDB_Structure
  • Homo sapiens0.0070972614View alignmentSCOP
    MMDB
    CATH
    5IY7 ( Chain: A)
    Human Holo-pic In The Open State
  • PDB_Info
  • PDB_Structure
  • Homo sapiens0.0070972614View alignmentSCOP
    MMDB
    CATH
    5IY8 ( Chain: A)
    Human Holo-pic In The Initial Transcribing State
  • PDB_Info
  • PDB_Structure
  • Homo sapiens0.0070972614View alignmentSCOP
    MMDB
    CATH
    5IY9 ( Chain: A)
    Human Holo-pic In The Initial Transcribing State (no Iis)
  • PDB_Info
  • PDB_Structure
  • Homo sapiens0.0070972614View alignmentSCOP
    MMDB
    CATH
    5IYA ( Chain: A)
    Human Core-pic In The Closed State
  • PDB_Info
  • PDB_Structure
  • Homo sapiens0.0070972614View alignmentSCOP
    MMDB
    CATH
    5IYB ( Chain: A)
    Human Core-pic In The Open State
  • PDB_Info
  • PDB_Structure
  • Homo sapiens0.0070972614View alignmentSCOP
    MMDB
    CATH
    5IYC ( Chain: A)
    Human Core-pic In The Initial Transcribing State
  • PDB_Info
  • PDB_Structure
  • Homo sapiens0.0070972614View alignmentSCOP
    MMDB
    CATH
    5IYD ( Chain: A)
    Human Core-pic In The Initial Transcribing State (no Iis)
  • PDB_Info
  • PDB_Structure
  • Homo sapiens0.0070972614View alignmentSCOP
    MMDB
    CATH
    5FLM ( Chain: A)
    Structure Of Transcribing Mammalian Rna Polymerase Ii
  • PDB_Info
  • PDB_Structure
  • Bos taurus0.0070972614View alignmentSCOP
    MMDB
    CATH
    2YTO ( Chain: A)
    Solution Structure Of The C2h2 Type Zinc Finger (region 659- 691) Of Human Zinc Finger Protein 484
  • PDB_Info
  • PDB_Structure
  • Homo sapiens0.0088974415View alignmentSCOP
    MMDB
    CATH

    Last updated on 2016-09-15