Restriction Fragments for tK(CUU)J



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BLAST search | Genome Restriction Map | Design Primers for this sequence


The currently selected gene/sequence is :

tK(CUU)J on chromosome X from coordinates 414966 to 415038.

seqfile=/share/crumb/www-data/html/tmp/gcgseq.tmp.7575.2

Start End Strand Enzyme_name Restriction_site 5prime 3prime 5primerev 3primerev 1 11 + MwoI GCNNNNNNNGC 7 4 . . 1 11 + BglI GCCNNNNNGGC 7 4 . . 10 13 + Hin6I GCGC 10 12 . . 10 13 + GlaI GCGC 11 11 . . 10 13 + HhaI GCGC 12 10 . . 22 25 + Hin6I GCGC 22 24 . . 22 25 + GlaI GCGC 23 23 . . 22 25 + HhaI GCGC 24 22 . . 23 26 + FnuDII* CGCG 24 24 . . 30 34 + HinfI GANTC 30 33 . . 30 40 + Hin4I GAYNNNNNVTC 21 16 53 48 30 34 - PleI GAGTC 24 25 . . 30 34 - MlyI GAGTC 24 24 . . 35 38 + MseI TTAA 35 37 . . 30 40 - Hin4I GAYNNNNNVTC 53 48 21 16 44 47 + SetI ASST 47 43 . . 55 58 + TaqI TCGA 55 57 . . 57 62 + SduI GDGCHC 61 57 . . 57 62 + HgiJII* GRGCYC 61 57 . . 58 61 + CviJI RGCY 59 59 . . 60 70 + BsiYI* CCNNNNNNNGG 66 63 . . 61 71 + BsiYI* CCNNNNNNNGG 67 64 . . 64 69 + SfeI* CTRYAG 64 68 . . 70 73 + CviJI RGCY 71 71 . . #--------------------------------------- # # # BglI: # [GCCNNNNNGGC] # 7 66 # # BsiYI*: # [CCNNNNNNNGG] # 1 6 66 # # CviJI: # [RGCY] # 2 12 59 # # FnuDII*: # [CGCG] # 24 49 # # GlaI: # [GCGC] # 11 12 50 # # HgiJII*: # [GRGCYC] # 12 61 # # HhaI: # [GCGC] # 12 12 49 # # Hin4I: # [GAYNNNNNVTC] # 0 0 20 21 32 # # Hin6I: # [GCGC] # 10 12 51 # # HinfI: # [GANTC] # 30 43 # # MlyI: # [GAGTC] # 24 49 # # MseI: # [TTAA] # 35 38 # # MwoI: # [GCNNNNNNNGC] # 7 66 # # PleI: # [GAGTC] # 24 49 # # SduI: # [GDGCHC] # 12 61 # # SetI: # [ASST] # 26 47 # # SfeI*: # [CTRYAG] # 9 64 # # TaqI: # [TCGA] # 18 55 # #--------------------------------------- #--------------------------------------- # Total_sequences: 1 # Total_length: 73 # Reported_sequences: 1 # Reported_hitcount: 24 #---------------------------------------