Restriction Fragments for SNR77/snR77



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BLAST search | Genome Restriction Map | Design Primers for this sequence


The currently selected gene/sequence is :

SNR77/snR77 on chromosome XIII from coordinates 297506 to 297593.

seqfile=/share/crumb/www-data/html/tmp/gcgseq.tmp.626.2

Start End Strand Enzyme_name Restriction_site 5prime 3prime 5primerev 3primerev 3 8 + NdeI CATATG 4 6 . . 13 18 + PsiI TTATAA 15 15 . . 29 32 + SetI ASST 32 28 . . 29 32 + CviJI RGCY 30 30 . . 29 32 + AluI AGCT 30 30 . . 35 38 + TspEI AATT 34 38 . . 39 43 + BsrI ACTGG 44 42 . . 42 45 + CviJI RGCY 43 43 . . 64 67 + TaiI ACGT 67 63 . . 64 67 + SetI ASST 67 63 . . 64 67 + MaeII ACGT 64 66 . . 71 74 + CviRI* TGCA 72 72 . . 78 83 + Hpy178III* TCNNGA 79 81 . . 83 86 + SetI ASST 86 82 . . 85 88 + MaeI CTAG 85 87 . . #--------------------------------------- # # # AluI: # [AGCT] # 30 58 # # BsrI: # [ACTGG] # 44 44 # # CviJI: # [RGCY] # 13 30 45 # # CviRI*: # [TGCA] # 16 72 # # Hpy178III*: # [TCNNGA] # 9 79 # # MaeI: # [CTAG] # 3 85 # # MaeII: # [ACGT] # 24 64 # # NdeI: # [CATATG] # 4 84 # # PsiI: # [TTATAA] # 15 73 # # SetI: # [ASST] # 2 19 32 35 # # TaiI: # [ACGT] # 21 67 # # TspEI: # [AATT] # 34 54 # #--------------------------------------- #--------------------------------------- # Total_sequences: 1 # Total_length: 88 # Reported_sequences: 1 # Reported_hitcount: 15 #---------------------------------------