Restriction Fragments for SNR76/snR76



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BLAST search | Genome Restriction Map | Design Primers for this sequence


The currently selected gene/sequence is :

SNR76/snR76 on chromosome XIII from coordinates 297725 to 297833.

seqfile=/share/crumb/www-data/html/tmp/gcgseq.tmp.23399.2

Start End Strand Enzyme_name Restriction_site 5prime 3prime 5primerev 3primerev 12 17 + XhoII RGATCY 12 16 . . 12 17 + NlaIV GGNNCC 14 14 . . 12 17 + BamHI GGATCC 12 16 . . 12 16 + BinI* GGATC 20 21 . . 10 13 - MnlI CCTC 3 2 . . 13 16 + DpnI GATC 14 14 . . 13 16 + BstKTI GATC 15 13 . . 13 16 + MboI GATC 12 16 . . 16 27 + BstXI CCANNNNNNTGG 23 19 . . 13 17 - BinI* GGATC 7 8 . . 22 28 + TspRI CASTGNN 28 19 . . 23 27 + BsrI ACTGG 28 26 . . 23 28 + BfiI ACTGGG 33 32 . . 26 31 + SduI GDGCHC 30 26 . . 26 31 + BseSI GKGCMC 30 26 . . 29 35 + TspRI CASTGNN 35 26 . . 31 35 + DdeI CTNAG 31 34 . . 31 35 - BspCNI CTCAG 23 21 . . 31 35 - BseMII CTCAG 22 20 . . 33 36 - MnlI CCTC 26 25 . . 62 66 + Tsp45I GTSAC 61 66 . . 62 66 + MaeIII GTNAC 61 66 . . 76 81 + Cac8I GCNNGC 78 78 . . 78 82 + BmgT120I GGNCC 79 80 . . 78 82 + AsuI* GGNCC 78 81 . . 79 82 + CviJI RGCY 80 80 . . 79 82 + HaeIII GGCC 80 80 . . 76 79 - AciI CCGC 76 78 . . 76 80 - FauI CCCGC 69 71 . . 82 85 + MaeI CTAG 82 84 . . 90 94 + FauI CCCGC 98 100 . . 91 94 + AciI CCGC 91 93 . . 92 95 + FnuDII* CGCG 93 93 . . 93 96 + Hin6I GCGC 93 95 . . 93 96 + GlaI GCGC 94 94 . . 93 96 + HhaI GCGC 95 93 . . 101 104 + DpnI GATC 102 102 . . 101 104 + BstKTI GATC 103 101 . . 101 104 + MboI GATC 100 104 . . 101 105 - BinI* GGATC 95 96 . . #--------------------------------------- # # # AciI: # [CCGC] # 15 18 76 # # AsuI*: # [GGNCC] # 31 78 # # BamHI: # [GGATCC] # 12 97 # # BfiI: # [ACTGGG] # 33 76 # # BinI*: # [GGATC] # 7 13 14 75 # # BmgT120I: # [GGNCC] # 30 79 # # BseMII: # [CTCAG] # 22 87 # # BseSI: # [GKGCMC] # 30 79 # # BspCNI: # [CTCAG] # 23 86 # # BsrI: # [ACTGG] # 28 81 # # BstKTI: # [GATC] # 6 15 88 # # BstXI: # [CCANNNNNNTGG] # 23 86 # # Cac8I: # [GCNNGC] # 31 78 # # CviJI: # [RGCY] # 29 80 # # DdeI: # [CTNAG] # 31 78 # # DpnI: # [GATC] # 7 14 88 # # FauI: # [CCCGC] # 11 29 69 # # FnuDII*: # [CGCG] # 16 93 # # GlaI: # [GCGC] # 15 94 # # HaeIII: # [GGCC] # 29 80 # # HhaI: # [GCGC] # 14 95 # # Hin6I: # [GCGC] # 16 93 # # MaeI: # [CTAG] # 27 82 # # MaeIII: # [GTNAC] # 48 61 # # MboI: # [GATC] # 9 12 88 # # MnlI: # [CCTC] # 3 23 83 # # NlaIV: # [GGNNCC] # 14 95 # # SduI: # [GDGCHC] # 30 79 # # Tsp45I: # [GTSAC] # 48 61 # # TspRI: # [CASTGNN] # 7 28 74 # # XhoII: # [RGATCY] # 12 97 # #--------------------------------------- #--------------------------------------- # Total_sequences: 1 # Total_length: 109 # Reported_sequences: 1 # Reported_hitcount: 40 #---------------------------------------