Restriction Fragments for SNR67/snR67



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BLAST search | Genome Restriction Map | Design Primers for this sequence


The currently selected gene/sequence is :

SNR67/snR67 on chromosome V from coordinates 61352 to 61433.

seqfile=/share/crumb/www-data/html/tmp/gcgseq.tmp.21610.2

Start End Strand Enzyme_name Restriction_site 5prime 3prime 5primerev 3primerev 4 7 + FatI CATG 3 7 . . 4 7 + NlaIII CATG 7 3 . . 4 7 + CviAII CATG 4 6 . . 10 21 + DrdI GACNNNNNNGTC 16 14 . . 12 16 + DdeI CTNAG 12 15 . . 27 37 + FalI AAGNNNNNCTT 18 13 50 45 31 36 + XhoII RGATCY 31 35 . . 31 35 + BinI* GGATC 39 40 . . 32 35 + DpnI GATC 33 33 . . 32 35 + BstKTI GATC 34 32 . . 32 35 + MboI GATC 31 35 . . 29 32 - AciI CCGC 29 31 . . 27 37 - FalI AAGNNNNNCTT 50 45 18 13 66 72 + TspRI CASTGNN 72 63 . . 72 77 + ApoI RAATTY 72 76 . . 73 76 + TspEI AATT 72 76 . . 76 80 + Hpy188I TCNGA 78 77 . . #--------------------------------------- # # # AciI: # [CCGC] # 29 53 # # ApoI: # [RAATTY] # 10 72 # # BinI*: # [GGATC] # 39 43 # # BstKTI: # [GATC] # 34 48 # # CviAII: # [CATG] # 4 78 # # DdeI: # [CTNAG] # 12 70 # # DpnI: # [GATC] # 33 49 # # DrdI: # [GACNNNNNNGTC] # 16 66 # # FalI: # [AAGNNNNNCTT] # 0 0 18 32 32 # # FatI: # [CATG] # 3 79 # # Hpy188I: # [TCNGA] # 4 78 # # MboI: # [GATC] # 31 51 # # NlaIII: # [CATG] # 7 75 # # TspEI: # [AATT] # 10 72 # # TspRI: # [CASTGNN] # 10 72 # # XhoII: # [RGATCY] # 31 51 # #--------------------------------------- #--------------------------------------- # Total_sequences: 1 # Total_length: 82 # Reported_sequences: 1 # Reported_hitcount: 17 #---------------------------------------