Restriction Fragments for SNR66/snR66



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BLAST search | Genome Restriction Map | Design Primers for this sequence


The currently selected gene/sequence is :

SNR66/snR66 on chromosome XIV from coordinates 586090 to 586175.

seqfile=/share/crumb/www-data/html/tmp/gcgseq.tmp.25942.2

Start End Strand Enzyme_name Restriction_site 5prime 3prime 5primerev 3primerev 9 13 + TspDTI ATGAA 24 22 . . 21 24 + CviRI* TGCA 22 22 . . 28 32 + PleI GAGTC 36 37 . . 28 32 + MlyI GAGTC 37 37 . . 28 32 + HinfI GANTC 28 31 . . 28 38 + BplI GAGNNNNNCTC 19 14 51 46 34 37 + SetI ASST 37 33 . . 34 37 + CviJI RGCY 35 35 . . 34 37 + AluI AGCT 35 35 . . 37 41 + Hpy188I TCNGA 39 38 . . 38 42 + DdeI CTNAG 38 41 . . 28 38 - BplI GAGNNNNNCTC 51 46 19 14 38 42 - BspCNI CTCAG 30 28 . . 38 42 - BseMII CTCAG 29 27 . . 56 59 + FatI CATG 55 59 . . 56 59 + NlaIII CATG 59 55 . . 56 59 + CviAII CATG 56 58 . . #--------------------------------------- # # # AluI: # [AGCT] # 35 51 # # BplI: # [GAGNNNNNCTC] # 0 0 19 32 35 # # BseMII: # [CTCAG] # 29 57 # # BspCNI: # [CTCAG] # 30 56 # # CviAII: # [CATG] # 30 56 # # CviJI: # [RGCY] # 35 51 # # CviRI*: # [TGCA] # 22 64 # # DdeI: # [CTNAG] # 38 48 # # FatI: # [CATG] # 31 55 # # HinfI: # [GANTC] # 28 58 # # Hpy188I: # [TCNGA] # 39 47 # # MlyI: # [GAGTC] # 37 49 # # NlaIII: # [CATG] # 27 59 # # PleI: # [GAGTC] # 36 50 # # SetI: # [ASST] # 37 49 # # TspDTI: # [ATGAA] # 24 62 # #--------------------------------------- #--------------------------------------- # Total_sequences: 1 # Total_length: 86 # Reported_sequences: 1 # Reported_hitcount: 17 #---------------------------------------