Restriction Fragments for RAD53/YPL153C



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The currently selected gene/sequence is :

RAD53/YPL153C on chromosome XVI from coordinates 264192 to 261727.

The sequence you have requested is oriented with respect to the Crick (bottom) strand. Thus, the chromosomal coordinate of the beginning of the gene or sequence is larger than that of the end. The sequence shown here is the 5'-3' direction of the Crick strand and is the reverse complement of the Watson (top) strand.

seqfile=/share/crumb/www-data/html/tmp/gcgseq.tmp.2.1742.2

Start End Strand Enzyme_name Restriction_site 5prime 3prime 5primerev 3primerev 7 12 + SspI AATATT 9 9 . . 27 37 + MwoI GCNNNNNNNGC 33 30 . . 36 41 + Cac8I GCNNGC 38 38 . . 39 42 + CviJI RGCY 40 40 . . 49 52 + SetI ASST 52 48 . . 71 76 + SmlI CTYRAG 71 75 . . 72 77 + Hpy178III* TCNNGA 73 75 . . 71 76 - Bce83I* CTTGAG 56 54 . . 81 84 + DpnI GATC 82 82 . . 81 84 + BstKTI GATC 83 81 . . 81 84 + MboI GATC 80 84 . . 99 104 + BsgI GTGCAG 120 118 . . 100 103 + CviRI* TGCA 101 101 . . 113 116 + Csp6I GTAC 113 115 . . 113 116 + RsaI GTAC 114 114 . . 116 121 + DsaI* CCRYGG 116 120 . . 116 121 + SecI* CCNNGG 116 120 . . 125 130 + ApoI RAATTY 125 129 . . 126 129 + TspEI AATT 125 129 . . 131 135 + BccI CCATC 139 140 . . 134 138 + Hpy188I TCNGA 136 135 . . 132 136 - FokI GGATG 118 122 . . 132 136 - BseGI GGATG 131 129 . . 146 151 + PvuII CAGCTG 148 148 . . 146 151 + NspBII* CMGCKG 148 148 . . 147 150 + SetI ASST 150 146 . . 147 150 + CviJI RGCY 148 148 . . 147 150 + AluI AGCT 148 148 . . 166 171 + SmlI CTYRAG 166 170 . . 166 171 + AflII CTTAAG 166 170 . . 167 170 + MseI TTAA 167 169 . . 179 182 + DpnI GATC 180 180 . . 179 182 + BstKTI GATC 181 179 . . 179 182 + MboI GATC 178 182 . . 179 183 - BinI* GGATC 173 174 . . 213 218 + GsaI CCCAGC 217 213 . . 213 218 + BseYI CCCAGC 213 217 . . 216 219 + CviJI RGCY 217 217 . . 221 225 + Tsp45I GTSAC 220 225 . . 221 225 + MaeIII GTNAC 220 225 . . 236 245 + XmnI GAANNNNTTC 240 240 . . 244 249 + Hpy178III* TCNNGA 245 247 . . 249 253 + Tsp4CI* ACNGT 251 250 . . 277 280 + MaeI CTAG 277 279 . . 283 287 + MboII GAAGA 295 294 . . 283 288 + BbvII* GAAGAC 290 294 . . 287 291 + Tsp4CI* ACNGT 289 288 . . 289 295 + BstEII GGTNACC 289 294 . . 290 294 + MaeIII GTNAC 289 294 . . 293 296 + SetI ASST 296 292 . . 314 324 + BsiYI* CCNNNNNNNGG 320 317 . . 322 328 + PpuMI RGGWCCY 323 326 . . 322 328 + DraII RGGNCCY 323 326 . . 322 326 + BslFI GGGAC 336 340 . . 322 327 + NlaIV GGNNCC 324 324 . . 323 327 + BmgT120I GGNCC 324 325 . . 323 327 + AvaII GGWCC 323 326 . . 323 327 + AsuI* GGNCC 323 326 . . 325 328 + SetI ASST 328 324 . . 325 331 + SexAI ACCWGGT 325 330 . . 326 330 + BssKI CCNGG 325 330 . . 326 330 + BseBI CCWGG 327 328 . . 326 330 + ScrFI CCNGG 327 328 . . 326 330 + EcoRII CCWGG 325 330 . . 331 334 + MseI TTAA 331 333 . . 328 333 - TsoI TARCCA 318 316 . . 347 350 + TaqI TCGA 347 349 . . 347 352 + Hpy178III* TCNNGA 348 350 . . 351 355 + MboII GAAGA 363 362 . . 364 372 + AlwNI CAGNNNCTG 369 366 . . 366 370 + MaeIII GTNAC 365 370 . . 369 373 + Tsp4CI* ACNGT 371 370 . . 372 376 + BsmAI GTCTC 377 381 . . 374 379 + SmlI CTYRAG 374 378 . . 378 381 + SetI ASST 381 377 . . 374 379 - Bce83I* CTTGAG 359 357 . . 379 383 + HphI GGTGA 391 390 . . 383 387 + TspDTI ATGAA 398 396 . . 385 398 + AjuI GAANNNNNNNTTGG 377 372 409 404 391 395 + Tsp4CI* ACNGT 393 392 . . 409 413 + TfiI GAWTC 409 412 . . 409 413 + HinfI GANTC 409 412 . . 412 416 + Hpy188I TCNGA 414 413 . . 415 425 + Hin4I GAYNNNNNVTC 406 401 438 433 415 425 - Hin4I GAYNNNNNVTC 438 433 406 401 436 440 - TspDTI ATGAA 426 424 . . 448 453 + ApoI RAATTY 448 452 . . 449 452 + TspEI AATT 448 452 . . 452 455 + MseI TTAA 452 454 . . 456 461 + BtsI GCAGTG 463 461 . . 457 463 + TspRI CASTGNN 463 454 . . 462 469 + PspXI VCTCGAGB 463 467 . . 462 465 + MnlI CCTC 472 471 . . 463 468 + SmlI CTYRAG 463 467 . . 463 468 + XhoI CTCGAG 463 467 . . 463 468 + BmeT110I CYCGRG 464 466 . . 463 468 + AvaI CYCGRG 463 467 . . 464 467 + TaqI TCGA 464 466 . . 481 484 + DpnI GATC 482 482 . . 481 484 + BstKTI GATC 483 481 . . 481 484 + MboI GATC 480 484 . . 490 495 + XhoII RGATCY 490 494 . . 490 495 + BglII AGATCT 490 494 . . 491 494 + DpnI GATC 492 492 . . 491 494 + BstKTI GATC 493 491 . . 491 494 + MboI GATC 490 494 . . 497 500 + SetI ASST 500 496 . . 508 511 + SetI ASST 511 507 . . 509 512 + MnlI CCTC 519 518 . . 519 522 + SetI ASST 522 518 . . 519 522 + CviJI RGCY 520 520 . . 519 522 + AluI AGCT 520 520 . . 526 530 + BssKI CCNGG 525 530 . . 526 530 + BseBI CCWGG 527 528 . . 526 530 + ScrFI CCNGG 527 528 . . 526 530 + EcoRII CCWGG 525 530 . . 546 549 + CviRI* TGCA 547 547 . . 547 551 + SfaNI GCATC 556 560 . . 560 565 + BalI TGGCCA 562 562 . . 560 565 + CfrI YGGCCR 560 564 . . 561 564 + CviJI RGCY 562 562 . . 561 564 + HaeIII GGCC 562 562 . . 571 575 + BsrI ACTGG 576 574 . . 581 584 + MseI TTAA 581 583 . . 592 595 + TaqI TCGA 592 594 . . 612 616 + BmgT120I GGNCC 613 614 . . 612 616 + AsuI* GGNCC 612 615 . . 613 616 + CviJI RGCY 614 614 . . 613 616 + HaeIII GGCC 614 614 . . 615 619 + BssKI CCNGG 614 619 . . 615 619 + BseBI CCWGG 616 617 . . 615 620 + SecI* CCNNGG 615 619 . . 615 619 + ScrFI CCNGG 616 617 . . 615 619 + EcoRII CCWGG 614 619 . . 621 624 + CviRI* TGCA 622 622 . . 631 635 + Tsp4CI* ACNGT 633 632 . . 642 645 + CviJI RGCY 643 643 . . 658 662 + BsrI ACTGG 663 661 . . 658 663 + BfiI ACTGGG 668 667 . . 663 672 + XmnI GAANNNNTTC 667 667 . . 672 675 + FnuDII* CGCG 673 673 . . 675 679 + HphI GGTGA 687 686 . . 673 676 - AciI CCGC 673 675 . . 678 682 + MboII GAAGA 690 689 . . 683 688 + PsiI TTATAA 685 685 . . 689 694 + Hpy166II GTNNAC 691 691 . . 714 718 + FokI GGATG 727 731 . . 714 718 + BseGI GGATG 720 718 . . 715 719 - BccI CCATC 709 710 . . 721 725 + Tsp45I GTSAC 720 725 . . 721 725 + MaeIII GTNAC 720 725 . . 743 746 + CviRI* TGCA 744 744 . . 749 752 + SetI ASST 752 748 . . 749 752 + CviJI RGCY 750 750 . . 749 752 + AluI AGCT 750 750 . . 760 765 + StyI CCWWGG 760 764 . . 760 765 + SecI* CCNNGG 760 764 . . 757 761 - FokI GGATG 743 747 . . 757 761 - BseGI GGATG 756 754 . . 769 772 + Csp6I GTAC 769 771 . . 769 772 + RsaI GTAC 770 770 . . 788 792 + TspDTI ATGAA 803 801 . . 790 794 + MboII GAAGA 802 801 . . 797 801 + DdeI CTNAG 797 800 . . 797 801 - BspCNI CTCAG 789 787 . . 797 801 - BseMII CTCAG 788 786 . . 813 817 + HphI GGTGA 825 824 . . 816 820 - BccI CCATC 810 811 . . 835 839 + HphI GGTGA 847 846 . . 836 840 + Tsp45I GTSAC 835 840 . . 836 840 + MaeIII GTNAC 835 840 . . 841 844 + MseI TTAA 841 843 . . 856 860 + BlsI GCNGC 858 857 . . 856 860 + BisI GCNGC 857 858 . . 856 860 + TseI GCWGC 856 859 . . 859 869 + MwoI GCNNNNNNNGC 865 862 . . 856 860 - BbvI GCAGC 843 847 . . 862 865 + FatI CATG 861 865 . . 862 865 + NlaIII CATG 865 861 . . 862 865 + CviAII CATG 862 864 . . 868 871 - AciI CCGC 868 870 . . 871 876 - MmeI TCCRAC 852 850 . . 877 881 + MboII GAAGA 889 888 . . 880 884 - SfaNI GCATC 870 874 . . 883 888 - GsaI CCCAGC 887 883 . . 883 888 - BseYI CCCAGC 883 887 . . 888 891 - MnlI CCTC 881 880 . . 894 899 + EcoRV GATATC 896 896 . . 899 903 + BssKI CCNGG 898 903 . . 899 903 + BseBI CCWGG 900 901 . . 899 903 + ScrFI CCNGG 900 901 . . 899 903 + EcoRII CCWGG 898 903 . . 941 945 + SfaNI GCATC 950 954 . . 946 949 + CviJI RGCY 947 947 . . 948 952 + BccI CCATC 956 957 . . 951 956 + Hpy178III* TCNNGA 952 954 . . 953 957 + Tsp45I GTSAC 952 957 . . 953 957 + MaeIII GTNAC 952 957 . . 956 959 + SetI ASST 959 955 . . 962 965 + CviJI RGCY 963 963 . . 970 975 + SspI AATATT 972 972 . . 991 994 + DpnI GATC 992 992 . . 991 994 + BstKTI GATC 993 991 . . 991 994 + MboI GATC 990 994 . . 991 995 - BinI* GGATC 985 986 . . 1015 1024 + PshAI GACNNNNGTC 1019 1019 . . 1032 1037 + TatI WGTACW 1032 1036 . . 1033 1036 + Csp6I GTAC 1033 1035 . . 1033 1036 + RsaI GTAC 1034 1034 . . 1054 1058 + TspDTI ATGAA 1069 1067 . . 1056 1065 + XmnI GAANNNNTTC 1060 1060 . . 1060 1063 + SetI ASST 1063 1059 . . 1061 1065 + Hin4II* CCTTC 1071 1070 . . 1078 1088 + MwoI GCNNNNNNNGC 1084 1081 . . 1079 1084 + NdeI CATATG 1080 1082 . . 1086 1091 + NlaIV GGNNCC 1088 1088 . . 1086 1091 + HgiCI* GGYRCC 1086 1090 . . 1089 1092 + SetI ASST 1092 1088 . . 1091 1096 + Eco57MI CTGRAG 1112 1110 . . 1091 1096 + Eco57I CTGAAG 1112 1110 . . 1100 1104 + Hpy188I TCNGA 1102 1101 . . 1104 1107 + SetI ASST 1107 1103 . . 1103 1106 - MnlI CCTC 1096 1095 . . 1114 1124 + BaeI ACNNNNGTAYC 1103 1098 1136 1131 1115 1119 - FokI GGATG 1101 1105 . . 1115 1119 - BseGI GGATG 1114 1112 . . 1117 1121 - TspGWI ACGGA 1107 1105 . . 1111 1121 - BaeI ACNNNNGTAYC 1136 1131 1103 1098 1125 1130 + Hpy178III* TCNNGA 1126 1128 . . 1130 1134 + TspDTI ATGAA 1145 1143 . . 1138 1142 + MboII GAAGA 1150 1149 . . 1151 1156 + TatI WGTACW 1151 1155 . . 1151 1156 + ScaI AGTACT 1153 1153 . . 1152 1155 + Csp6I GTAC 1152 1154 . . 1152 1155 + RsaI GTAC 1153 1153 . . 1155 1160 + Ksp632I* CTCTTC 1161 1164 . . 1156 1160 - MboII GAAGA 1148 1147 . . 1168 1178 + Hin4I GAYNNNNNVTC 1159 1154 1191 1186 1168 1178 - Hin4I GAYNNNNNVTC 1191 1186 1159 1154 1183 1187 + FokI GGATG 1196 1200 . . 1183 1187 + BseGI GGATG 1189 1187 . . 1183 1194 - TstI CACNNNNNNTCC 1207 1202 1175 1170 1209 1213 + BmgT120I GGNCC 1210 1211 . . 1209 1213 + AsuI* GGNCC 1209 1212 . . 1210 1213 + CviJI RGCY 1211 1211 . . 1210 1213 + HaeIII GGCC 1211 1211 . . 1218 1221 + SetI ASST 1221 1217 . . 1219 1229 + BsiYI* CCNNNNNNNGG 1225 1222 . . 1239 1243 + BmgT120I GGNCC 1240 1241 . . 1239 1243 + AvaII GGWCC 1239 1242 . . 1239 1243 + AsuI* GGNCC 1239 1242 . . 1244 1247 + TspEI AATT 1243 1247 . . 1262 1266 + MboII GAAGA 1274 1273 . . 1267 1270 + CviJI RGCY 1268 1268 . . 1262 1267 - Ksp632I* CTCTTC 1257 1260 . . 1265 1268 - MnlI CCTC 1258 1257 . . 1275 1280 + Hpy178III* TCNNGA 1276 1278 . . 1275 1280 + BspHI TCATGA 1275 1279 . . 1276 1279 + FatI CATG 1275 1279 . . 1276 1279 + NlaIII CATG 1279 1275 . . 1276 1279 + CviAII CATG 1276 1278 . . 1277 1281 + TspDTI ATGAA 1292 1290 . . 1281 1287 + DraII RGGNCCY 1282 1285 . . 1282 1288 + DraII RGGNCCY 1283 1286 . . 1282 1287 + SduI GDGCHC 1286 1282 . . 1282 1287 + Bsp120I GGGCCC 1282 1286 . . 1282 1287 + NlaIV GGNNCC 1284 1284 . . 1282 1286 + BmgT120I GGNCC 1283 1284 . . 1282 1287 + HgiJII* GRGCYC 1286 1282 . . 1282 1287 + BseSI GKGCMC 1286 1282 . . 1282 1286 + AsuI* GGNCC 1282 1285 . . 1282 1287 + ApaI GGGCCC 1286 1282 . . 1279 1283 - Hin4II* CCTTC 1273 1272 . . 1283 1286 + CviJI RGCY 1284 1284 . . 1283 1286 + HaeIII GGCC 1284 1284 . . 1283 1288 + NlaIV GGNNCC 1285 1285 . . 1283 1287 + BmgT120I GGNCC 1284 1285 . . 1283 1287 + AsuI* GGNCC 1283 1286 . . 1287 1290 + MnlI CCTC 1297 1296 . . 1298 1303 + Hpy178III* TCNNGA 1299 1301 . . 1298 1303 + BetI* WCCGGW 1298 1302 . . 1298 1303 + BspMII* TCCGGA 1298 1302 . . 1299 1302 + HpaII CCGG 1299 1301 . . 1302 1307 + EcoRV GATATC 1304 1304 . . 1306 1310 + Hpy188I TCNGA 1308 1307 . . 1307 1312 + Eco57MI CTGRAG 1328 1326 . . 1307 1312 + Eco57I CTGAAG 1328 1326 . . 1309 1313 + MboII GAAGA 1321 1320 . . 1324 1328 - TspDTI ATGAA 1314 1312 . . 1330 1334 + TfiI GAWTC 1330 1333 . . 1330 1334 + HinfI GANTC 1330 1333 . . 1332 1336 - TspDTI ATGAA 1322 1320 . . 1338 1342 + MaeIII GTNAC 1337 1342 . . 1343 1346 + SetI ASST 1346 1342 . . 1347 1352 + XhoII RGATCY 1347 1351 . . 1347 1352 + NlaIV GGNNCC 1349 1349 . . 1347 1352 + BamHI GGATCC 1347 1351 . . 1347 1351 + BinI* GGATC 1355 1356 . . 1348 1351 + DpnI GATC 1349 1349 . . 1348 1351 + BstKTI GATC 1350 1348 . . 1348 1351 + MboI GATC 1347 1351 . . 1348 1352 - BinI* GGATC 1342 1343 . . 1360 1363 + SetI ASST 1363 1359 . . 1362 1367 + SalI GTCGAC 1362 1366 . . 1362 1367 + Hpy166II GTNNAC 1364 1364 . . 1362 1367 + HindII GTYRAC 1364 1364 . . 1362 1367 + AccI GTMKAC 1363 1365 . . 1363 1366 + TaqI TCGA 1363 1365 . . 1367 1372 + PvuII CAGCTG 1369 1369 . . 1367 1372 + NspBII* CMGCKG 1369 1369 . . 1368 1371 + SetI ASST 1371 1367 . . 1368 1371 + CviJI RGCY 1369 1369 . . 1368 1371 + AluI AGCT 1369 1369 . . 1369 1379 + MwoI GCNNNNNNNGC 1375 1372 . . 1369 1373 + BlsI GCNGC 1371 1370 . . 1369 1373 + BisI GCNGC 1370 1371 . . 1369 1373 + TseI GCWGC 1369 1372 . . 1371 1374 + CviRI* TGCA 1372 1372 . . 1369 1373 - BbvI GCAGC 1356 1360 . . 1377 1380 + CviJI RGCY 1378 1378 . . 1383 1387 + TfiI GAWTC 1383 1386 . . 1383 1387 + HinfI GANTC 1383 1386 . . 1390 1395 + SecI* CCNNGG 1390 1394 . . 1387 1391 - FokI GGATG 1373 1377 . . 1391 1395 + BssKI CCNGG 1390 1395 . . 1387 1391 - BseGI GGATG 1386 1384 . . 1391 1395 + BseBI CCWGG 1392 1393 . . 1391 1395 + ScrFI CCNGG 1392 1393 . . 1391 1395 + EcoRII CCWGG 1390 1395 . . 1394 1398 + BinI* GGATC 1402 1403 . . 1395 1398 + DpnI GATC 1396 1396 . . 1395 1398 + BstKTI GATC 1397 1395 . . 1395 1398 + MboI GATC 1394 1398 . . 1397 1402 + Hpy178III* TCNNGA 1398 1400 . . 1404 1408 + PleI GAGTC 1412 1413 . . 1404 1408 + MlyI GAGTC 1413 1413 . . 1404 1408 + HinfI GANTC 1404 1407 . . 1413 1418 + SduI GDGCHC 1417 1413 . . 1413 1418 + HgiJII* GRGCYC 1417 1413 . . 1414 1417 + CviJI RGCY 1415 1415 . . 1424 1429 + NdeI CATATG 1425 1427 . . 1429 1433 + HphI GGTGA 1441 1440 . . 1467 1471 + BlsI GCNGC 1469 1468 . . 1467 1471 + BisI GCNGC 1468 1469 . . 1467 1471 + BbvI GCAGC 1479 1483 . . 1467 1471 + TseI GCWGC 1467 1470 . . 1468 1473 + EcoP15I CAGCAG 1498 1500 . . 1475 1478 + TspEI AATT 1474 1478 . . 1495 1499 - SfaNI GCATC 1485 1489 . . 1507 1512 + ApoI RAATTY 1507 1511 . . 1508 1511 + TspEI AATT 1507 1511 . . 1519 1522 + Hin6I GCGC 1519 1521 . . 1519 1522 + GlaI GCGC 1520 1520 . . 1519 1522 + HhaI GCGC 1521 1519 . . 1529 1532 + TspEI AATT 1528 1532 . . 1551 1556 + Hpy178III* TCNNGA 1552 1554 . . 1560 1564 + BinI* GGATC 1568 1569 . . 1561 1564 + DpnI GATC 1562 1562 . . 1561 1564 + BstKTI GATC 1563 1561 . . 1561 1564 + MboI GATC 1560 1564 . . 1563 1568 + Hpy178III* TCNNGA 1564 1566 . . 1567 1571 + MboII GAAGA 1579 1578 . . 1567 1572 + BbvII* GAAGAC 1574 1578 . . 1576 1580 - BccI CCATC 1570 1571 . . 1583 1588 + ApoI RAATTY 1583 1587 . . 1584 1587 + TspEI AATT 1583 1587 . . 1594 1599 + AhaIII* TTTAAA 1596 1596 . . 1595 1598 + MseI TTAA 1595 1597 . . 1603 1607 + FauI CCCGC 1611 1613 . . 1604 1607 + AciI CCGC 1604 1606 . . 1620 1623 + TaqI TCGA 1620 1622 . . 1631 1634 + CviJI RGCY 1632 1632 . . 1655 1658 + MaeI CTAG 1655 1657 . . 1688 1692 + DdeI CTNAG 1688 1691 . . 1688 1692 - BspCNI CTCAG 1680 1678 . . 1688 1692 - BseMII CTCAG 1679 1677 . . 1697 1702 + Hpy178III* TCNNGA 1698 1700 . . 1701 1706 + SacI GAGCTC 1705 1701 . . 1701 1706 + Ecl136II GAGCTC 1703 1703 . . 1701 1706 + SduI GDGCHC 1705 1701 . . 1701 1706 + HgiJII* GRGCYC 1705 1701 . . 1701 1706 + HgiAI* GWGCWC 1705 1701 . . 1702 1705 + SetI ASST 1705 1701 . . 1702 1705 + CviJI RGCY 1703 1703 . . 1702 1705 + AluI AGCT 1703 1703 . . 1726 1729 + SetI ASST 1729 1725 . . 1732 1735 + MseI TTAA 1732 1734 . . 1737 1742 + AhaIII* TTTAAA 1739 1739 . . 1738 1741 + MseI TTAA 1738 1740 . . 1745 1750 - BsrDI GCAATG 1744 1742 . . 1764 1769 + Hpy178III* TCNNGA 1765 1767 . . 1771 1774 + CviJI RGCY 1772 1772 . . 1773 1777 + BssKI CCNGG 1772 1777 . . 1773 1777 + BseBI CCWGG 1774 1775 . . 1773 1777 + ScrFI CCNGG 1774 1775 . . 1773 1777 + EcoRII CCWGG 1772 1777 . . 1774 1779 + Eco57MI CTGRAG 1795 1793 . . 1774 1779 + GsuI CTGGAG 1795 1793 . . 1779 1783 + TfiI GAWTC 1779 1782 . . 1779 1783 + HinfI GANTC 1779 1782 . . 1788 1791 + SetI ASST 1791 1787 . . 1794 1798 + TfiI GAWTC 1794 1797 . . 1794 1798 + HinfI GANTC 1794 1797 . . 1804 1808 - TspDTI ATGAA 1794 1792 . . 1813 1818 + XhoII RGATCY 1813 1817 . . 1814 1817 + DpnI GATC 1815 1815 . . 1814 1817 + BstKTI GATC 1816 1814 . . 1814 1817 + MboI GATC 1813 1817 . . 1816 1820 + Hpy188I TCNGA 1818 1817 . . 1817 1822 + SecI* CCNNGG 1817 1821 . . 1814 1818 - BinI* GGATC 1808 1809 . . 1819 1822 - MnlI CCTC 1812 1811 . . 1825 1828 + CviRI* TGCA 1826 1826 . . 1827 1832 + MfeI CAATTG 1827 1831 . . 1828 1831 + TspEI AATT 1827 1831 . . 1836 1839 + TspEI AATT 1835 1839 . . 1840 1844 + MboII GAAGA 1852 1851 . . 1840 1845 + BbvII* GAAGAC 1847 1851 . . 1849 1852 + SetI ASST 1852 1848 . . 1854 1858 + BsmAI GTCTC 1859 1863 . . 1855 1860 + Hpy178III* TCNNGA 1856 1858 . . 1856 1861 + SmlI CTYRAG 1856 1860 . . 1856 1861 + XhoI CTCGAG 1856 1860 . . 1856 1861 + BmeT110I CYCGRG 1857 1859 . . 1856 1861 + AvaI CYCGRG 1856 1860 . . 1857 1860 + TaqI TCGA 1857 1859 . . 1858 1869 + BcgI CGANNNNNNTGC 1847 1845 1881 1879 1862 1866 - TspDTI ATGAA 1852 1850 . . 1864 1869 - BsrDI GCAATG 1863 1861 . . 1870 1874 - TspDTI ATGAA 1860 1858 . . 1884 1887 - MnlI CCTC 1877 1876 . . 1887 1892 + NspI RCATGY 1891 1887 . . 1887 1892 + Cac8I GCNNGC 1889 1889 . . 1887 1892 + SphI GCATGC 1891 1887 . . 1888 1891 + FatI CATG 1887 1891 . . 1888 1891 + NlaIII CATG 1891 1887 . . 1888 1891 + CviAII CATG 1888 1890 . . 1892 1897 + SfeI* CTRYAG 1892 1896 . . 1904 1909 + NspI RCATGY 1908 1904 . . 1905 1908 + FatI CATG 1904 1908 . . 1905 1908 + NlaIII CATG 1908 1904 . . 1905 1908 + CviAII CATG 1905 1907 . . 1910 1914 + TspDTI ATGAA 1925 1923 . . 1912 1916 + TfiI GAWTC 1912 1915 . . 1912 1916 + HinfI GANTC 1912 1915 . . 1918 1921 + HpaII CCGG 1918 1920 . . 1918 1928 + BsiYI* CCNNNNNNNGG 1924 1921 . . 1926 1929 + SetI ASST 1929 1925 . . 1954 1959 + BetI* WCCGGW 1954 1958 . . 1955 1958 + HpaII CCGG 1955 1957 . . 1964 1967 + TaiI ACGT 1967 1963 . . 1964 1967 + SetI ASST 1967 1963 . . 1964 1967 + MaeII ACGT 1964 1966 . . 1957 1968 - TstI CACNNNNNNTCC 1981 1976 1949 1944 1969 1972 + SetI ASST 1972 1968 . . 1969 1972 + CviJI RGCY 1970 1970 . . 1969 1972 + AluI AGCT 1970 1970 . . 1973 1980 + SwaI ATTTAAAT 1976 1976 . . 1974 1979 + AhaIII* TTTAAA 1976 1976 . . 1975 1978 + MseI TTAA 1975 1977 . . 1986 1989 + AciI CCGC 1986 1988 . . 1989 1992 + FatI CATG 1988 1992 . . 1989 1992 + NlaIII CATG 1992 1988 . . 1989 1992 + CviAII CATG 1989 1991 . . 2000 2003 + Csp6I GTAC 2000 2002 . . 2000 2003 + RsaI GTAC 2001 2001 . . 2005 2010 + ApoI RAATTY 2005 2009 . . 2006 2009 + TspEI AATT 2005 2009 . . 2021 2025 + TspGWI ACGGA 2036 2034 . . 2027 2031 + TspDTI ATGAA 2042 2040 . . 2033 2038 + Hpy178III* TCNNGA 2034 2036 . . 2024 2034 - Hin4I GAYNNNNNVTC 2047 2042 2015 2010 2037 2040 + DpnI GATC 2038 2038 . . 2037 2040 + BstKTI GATC 2039 2037 . . 2037 2040 + MboI GATC 2036 2040 . . 2059 2064 + ApoI RAATTY 2059 2063 . . 2060 2063 + TspEI AATT 2059 2063 . . 2071 2074 + CviJI RGCY 2072 2072 . . 2074 2079 + AhaIII* TTTAAA 2076 2076 . . 2075 2078 + MseI TTAA 2075 2077 . . 2085 2088 + TspEI AATT 2084 2088 . . 2087 2090 + MseI TTAA 2087 2089 . . 2096 2101 + SfeI* CTRYAG 2096 2100 . . 2100 2103 + SetI ASST 2103 2099 . . 2108 2111 + MseI TTAA 2108 2110 . . 2113 2116 - MnlI CCTC 2106 2105 . . 2121 2124 + SetI ASST 2124 2120 . . 2127 2131 + MaeIII GTNAC 2126 2131 . . 2145 2150 + TatI WGTACW 2145 2149 . . 2145 2150 + ScaI AGTACT 2147 2147 . . 2146 2149 + Csp6I GTAC 2146 2148 . . 2146 2149 + RsaI GTAC 2147 2147 . . 2149 2154 + SmlI CTYRAG 2149 2153 . . 2149 2154 + AflII CTTAAG 2149 2153 . . 2150 2153 + MseI TTAA 2150 2152 . . 2160 2163 + CviJI RGCY 2161 2161 . . 2164 2168 + MboII GAAGA 2176 2175 . . 2178 2182 + HphI GGTGA 2190 2189 . . 2187 2192 + Hpy166II GTNNAC 2189 2189 . . 2187 2192 + HpaI GTTAAC 2189 2189 . . 2187 2192 + HindII GTYRAC 2189 2189 . . 2188 2191 + MseI TTAA 2188 2190 . . 2193 2203 + BsiYI* CCNNNNNNNGG 2199 2196 . . 2193 2203 + PflMI CCANNNNNTGG 2199 2196 . . 2199 2209 + Hin4I GAYNNNNNVTC 2190 2185 2222 2217 2203 2207 + BlsI GCNGC 2205 2204 . . 2203 2207 + BisI GCNGC 2204 2205 . . 2199 2203 - BccI CCATC 2193 2194 . . 2203 2207 + BbvI GCAGC 2215 2219 . . 2203 2207 + TseI GCWGC 2203 2206 . . 2205 2208 + SetI ASST 2208 2204 . . 2205 2208 + CviJI RGCY 2206 2206 . . 2205 2208 + AluI AGCT 2206 2206 . . 2206 2216 + MwoI GCNNNNNNNGC 2212 2209 . . 2211 2214 + TaiI ACGT 2214 2210 . . 2211 2214 + SetI ASST 2214 2210 . . 2211 2214 + MaeII ACGT 2211 2213 . . 2214 2217 + CviRI* TGCA 2215 2215 . . 2225 2228 + MnlI CCTC 2235 2234 . . 2225 2230 + SecI* CCNNGG 2225 2229 . . 2229 2232 + CviJI RGCY 2230 2230 . . 2226 2231 - NmeAIII GCCGAG 2206 2204 . . 2233 2237 - MboII GAAGA 2225 2224 . . 2236 2240 - MboII GAAGA 2228 2227 . . 2238 2242 - TspDTI ATGAA 2228 2226 . . 2250 2253 + CviJI RGCY 2251 2251 . . 2252 2256 + DdeI CTNAG 2252 2255 . . 2258 2261 + CviJI RGCY 2259 2259 . . 2259 2263 + TauI GCSGC 2262 2259 . . 2259 2263 + BlsI GCNGC 2261 2260 . . 2259 2263 + BisI GCNGC 2260 2261 . . 2260 2263 + AciI CCGC 2260 2262 . . 2263 2267 - BsrI ACTGG 2263 2261 . . 2285 2289 + BceAI ACGGC 2301 2303 . . 2293 2296 + TspEI AATT 2292 2296 . . 2299 2302 + Csp6I GTAC 2299 2301 . . 2299 2302 + RsaI GTAC 2300 2300 . . 2317 2321 + PleI GAGTC 2325 2326 . . 2317 2321 + MlyI GAGTC 2326 2326 . . 2317 2321 + HinfI GANTC 2317 2320 . . 2319 2323 + Tsp45I GTSAC 2318 2323 . . 2319 2323 + MaeIII GTNAC 2318 2323 . . 2320 2324 - HphI GGTGA 2312 2311 . . 2326 2331 + VspI ATTAAT 2327 2329 . . 2327 2330 + MseI TTAA 2327 2329 . . 2352 2356 + MboII GAAGA 2364 2363 . . 2352 2357 - Ksp632I* CTCTTC 2347 2350 . . 2357 2366 + XmnI GAANNNNTTC 2361 2361 . . 2388 2391 + TspEI AATT 2387 2391 . . 2392 2395 + DpnI GATC 2393 2393 . . 2392 2395 + BstKTI GATC 2394 2392 . . 2392 2395 + MboI GATC 2391 2395 . . 2396 2399 + MaeI CTAG 2396 2398 . . 2392 2396 - BinI* GGATC 2386 2387 . . 2405 2408 + SetI ASST 2408 2404 . . 2403 2407 - Hin4II* CCTTC 2397 2396 . . 2408 2411 + MseI TTAA 2408 2410 . . 2420 2423 + TspEI AATT 2419 2423 . . 2424 2428 + BmgT120I GGNCC 2425 2426 . . 2424 2428 + AvaII GGWCC 2424 2427 . . 2424 2428 + AsuI* GGNCC 2424 2427 . . 2425 2435 + Hin4I GAYNNNNNVTC 2416 2411 2448 2443 2431 2434 + SetI ASST 2434 2430 . . 2432 2435 + MnlI CCTC 2442 2441 . . 2439 2445 + DraII RGGNCCY 2440 2443 . . 2440 2443 + CviJI RGCY 2441 2441 . . 2440 2443 + HaeIII GGCC 2441 2441 . . 2440 2445 + NlaIV GGNNCC 2442 2442 . . 2440 2444 + BmgT120I GGNCC 2441 2442 . . 2440 2444 + AsuI* GGNCC 2440 2443 . . 2443 2448 + BmeT110I CYCGRG 2444 2446 . . 2443 2448 + AvaI CYCGRG 2443 2447 . . 2448 2453 + ApoI RAATTY 2448 2452 . . 2449 2452 + TspEI AATT 2448 2452 . . 2453 2456 + CviRI* TGCA 2454 2454 . . 2456 2459 + TspEI AATT 2455 2459 . . #--------------------------------------- # # # AccI: # [GTMKAC] # 1103 1363 # # AciI: # [CCGC] # 195 206 274 382 673 736 # # AflII: # [CTTAAG] # 166 317 1983 # # AhaIII*: # [TTTAAA] # 100 143 237 390 1596 # # AjuI: # [GAANNNNNNNTTGG] # 32 377 2057 # # AluI: # [AGCT] # 148 230 236 260 267 334 # 372 619 # # AlwNI: # [CAGNNNCTG] # 369 2097 # # ApaI: # [GGGCCC] # 1180 1286 # # ApoI: # [RAATTY] # 18 54 76 125 323 389 # 422 1059 # # AsuI*: # [GGNCC] # 1 16 26 30 43 289 # 323 597 1141 # # AvaI: # [CYCGRG] # 23 463 587 1393 # # AvaII: # [GGWCC] # 42 323 916 1185 # # BaeI: # [ACNNNNGTAYC] # 0 0 33 1103 1330 # # BalI: # [TGGCCA] # 562 1904 # # BamHI: # [GGATCC] # 1119 1347 # # BbvI: # [GCAGC] # 123 251 513 736 843 # # BbvII*: # [GAAGAC] # 273 290 619 1284 # # BccI: # [CCATC] # 101 139 146 273 570 614 # 623 # # Bce83I*: # [CTTGAG] # 56 303 2107 # # BceAI: # [ACGGC] # 165 2301 # # BcgI: # [CGANNNNNNTGC] # 34 585 1847 # # BetI*: # [WCCGGW] # 512 656 1298 # # BfiI: # [ACTGGG] # 668 1798 # # BglII: # [AGATCT] # 490 1976 # # BinI*: # [GGATC] # 13 47 80 166 173 240 # 357 578 812 # # BisI: # [GCNGC] # 56 98 206 513 736 857 # # BlsI: # [GCNGC] # 56 98 205 513 736 858 # # BmeT110I: # [CYCGRG] # 22 464 587 1393 # # BmgT120I: # [GGNCC] # 1 16 25 30 43 289 # 324 597 1141 # # BseBI: # [CCWGG] # 89 200 284 327 382 492 # 692 # # BseGI: # [GGATG] # 36 75 131 197 358 589 # 1080 # # BseMII: # [CTCAG] # 787 788 891 # # BseSI: # [GKGCMC] # 1180 1286 # # BseYI: # [CCCAGC] # 213 670 1583 # # BsgI: # [GTGCAG] # 120 2346 # # BsiYI*: # [CCNNNNNNNGG] # 267 275 320 699 905 # # BslFI: # [GGGAC] # 336 2130 # # BsmAI: # [GTCTC] # 377 607 1482 # # Bsp120I: # [GGGCCC] # 1184 1282 # # BspCNI: # [CTCAG] # 786 789 891 # # BspHI: # [TCATGA] # 1191 1275 # # BspMII*: # [TCCGGA] # 1168 1298 # # BsrDI: # [GCAATG] # 119 603 1744 # # BsrI: # [ACTGG] # 87 203 576 1600 # # BssKI: # [CCNGG] # 89 200 284 325 382 492 # 694 # # BstEII: # [GGTNACC] # 289 2177 # # BstKTI: # [GATC] # 10 47 72 83 98 166 # 223 253 302 355 357 500 # # BtsI: # [GCAGTG] # 463 2003 # # Cac8I: # [GCNNGC] # 38 577 1851 # # CfrI: # [YGGCCR] # 560 1906 # # Csp6I: # [GTAC] # 113 119 146 153 167 264 # 656 848 # # CviAII: # [CATG] # 17 84 414 477 612 862 # # CviJI: # [RGCY] # 8 9 16 16 21 24 # 25 29 37 40 42 45 # 52 57 69 69 71 85 # 89 102 107 108 182 197 # 198 217 248 303 # # CviRI*: # [TGCA] # 12 75 101 122 239 389 # 446 454 628 # # DdeI: # [CTNAG] # 214 564 797 891 # # DpnI: # [GATC] # 10 47 73 82 98 166 # 223 253 302 355 357 500 # # DraII: # [RGGNCCY] # 1 26 323 959 1157 # # DsaI*: # [CCRYGG] # 116 2350 # # Ecl136II: # [GAGCTC] # 763 1703 # # Eco57I: # [CTGAAG] # 216 1112 1138 # # Eco57MI: # [CTGRAG] # 216 467 671 1112 # # EcoP15I: # [CAGCAG] # 968 1498 # # EcoRII: # [CCWGG] # 89 200 284 325 382 492 # 694 # # EcoRV: # [GATATC] # 408 896 1162 # # FatI: # [CATG] # 17 84 414 478 612 861 # # FauI: # [CCCGC] # 855 1611 # # FnuDII*: # [CGCG] # 673 1793 # # FokI: # [GGATG] # 16 95 118 177 358 609 # 1093 # # GlaI: # [GCGC] # 946 1520 # # GsaI: # [CCCAGC] # 217 670 1579 # # GsuI: # [CTGGAG] # 671 1795 # # HaeIII: # [GGCC] # 25 52 73 562 597 1157 # # HgiAI*: # [GWGCWC] # 761 1705 # # HgiCI*: # [GGYRCC] # 1086 1380 # # HgiJII*: # [GRGCYC] # 131 288 761 1286 # # HhaI: # [GCGC] # 945 1521 # # Hin4I: # [GAYNNNNNVTC] # 0 0 0 0 18 32 # 32 32 32 32 143 194 # 406 721 824 # # Hin4II*: # [CCTTC] # 69 202 1071 1124 # # Hin6I: # [GCGC] # 947 1519 # # HindII: # [GTYRAC] # 277 825 1364 # # HinfI: # [GANTC] # 15 21 53 118 149 375 # 405 409 921 # # HpaI: # [GTTAAC] # 277 2189 # # HpaII: # [CCGG] # 37 511 619 1299 # # HphI: # [GGTGA] # 22 122 138 154 296 391 # 594 749 # # Hpy166II: # [GTNNAC] # 277 673 691 825 # # Hpy178III*: # [TCNNGA] # 12 23 67 73 91 99 # 103 134 150 154 172 174 # 178 432 604 # # Hpy188I: # [TCNGA] # 136 206 278 510 648 688 # # Ksp632I*: # [CTCTTC] # 96 119 1090 1161 # # MaeI: # [CTAG] # 70 277 741 1378 # # MaeII: # [ACGT] # 247 255 1964 # # MaeIII: # [GTNAC] # 69 76 115 117 148 192 # 220 355 385 789 # # MboI: # [GATC] # 10 47 75 80 98 166 # 223 253 302 355 357 500 # # MboII: # [GAAGA] # 2 3 47 49 68 87 # 102 112 124 136 258 259 # 273 295 324 327 # # MfeI: # [CAATTG] # 639 1827 # # MlyI: # [GAGTC] # 140 913 1413 # # MmeI: # [TCCRAC] # 852 1614 # # MnlI: # [CCTC] # 24 39 47 65 129 162 # 207 215 229 362 472 515 # # MseI: # [TTAA] # 6 12 21 38 42 58 # 81 100 121 129 137 139 # 164 167 237 260 754 # # MwoI: # [GCNNNNNNNGC] # 33 219 254 291 832 837 # # NdeI: # [CATATG] # 345 1041 1080 # # NlaIII: # [CATG] # 17 84 414 474 612 865 # # NlaIV: # [GGNNCC] # 1 24 64 196 324 764 # 1093 # # NmeAIII: # [GCCGAG] # 260 2206 # # NspBII*: # [CMGCKG] # 148 1097 1221 # # NspI: # [RCATGY] # 17 558 1891 # # PflMI: # [CCANNNNNTGG] # 267 2199 # # PleI: # [GAGTC] # 141 913 1412 # # PpuMI: # [RGGWCCY] # 323 2143 # # PshAI: # [GACNNNNGTC] # 1019 1447 # # PsiI: # [TTATAA] # 685 1781 # # PspXI: # [VCTCGAGB] # 463 2003 # # PvuII: # [CAGCTG] # 148 1097 1221 # # RsaI: # [GTAC] # 114 119 146 153 166 264 # 656 848 # # SacI: # [GAGCTC] # 761 1705 # # SalI: # [GTCGAC] # 1104 1362 # # ScaI: # [AGTACT] # 319 994 1153 # # ScrFI: # [CCNGG] # 89 200 284 327 382 492 # 692 # # SduI: # [GDGCHC] # 131 288 761 1286 # # SecI*: # [CCNNGG] # 116 145 241 408 427 499 # 630 # # SetI: # [ASST] # 5 6 8 11 11 15 # 17 21 24 26 29 32 # 32 38 52 53 61 62 # 77 84 98 104 114 119 # 125 131 146 194 207 230 # 334 # # SexAI: # [ACCWGGT] # 325 2141 # # SfaNI: # [GCATC] # 80 314 535 556 981 # # SfeI*: # [CTRYAG] # 204 370 1892 # # SmlI: # [CTYRAG] # 71 89 95 208 293 317 # 1393 # # SphI: # [GCATGC] # 575 1891 # # SspI: # [AATATT] # 9 963 1494 # # StyI: # [CCWWGG] # 760 1706 # # SwaI: # [ATTTAAAT] # 490 1976 # # TaiI: # [ACGT] # 247 252 1967 # # TaqI: # [TCGA] # 117 128 237 257 347 609 # 771 # # TatI: # [WGTACW] # 119 321 994 1032 # # TauI: # [GCSGC] # 204 2262 # # TfiI: # [GAWTC] # 15 53 118 396 409 554 # 921 # # TseI: # [GCWGC] # 98 263 513 736 856 # # TsoI: # [TARCCA] # 318 2148 # # Tsp45I: # [GTSAC] # 115 117 148 220 500 1366 # # Tsp4CI*: # [ACNGT] # 22 38 82 240 251 1833 # # TspDTI: # [ATGAA] # 8 8 22 28 58 65 # 76 117 147 186 238 266 # 377 398 472 # # TspEI: # [AATT] # 7 8 11 21 25 29 # 32 33 54 55 95 125 # 170 208 231 244 323 795 # # TspGWI: # [ACGGA] # 430 929 1107 # # TspRI: # [CASTGNN] # 463 2003 # # TstI: # [CACNNNNNNTCC] # 32 32 485 742 1175 # # VspI: # [ATTAAT] # 139 2327 # # XhoI: # [CTCGAG] # 463 610 1393 # # XhoII: # [RGATCY] # 466 490 653 857 # # XmnI: # [GAANNNNTTC] # 105 240 393 427 1301 # #--------------------------------------- #--------------------------------------- # Total_sequences: 1 # Total_length: 2466 # Reported_sequences: 1 # Reported_hitcount: 576 #---------------------------------------