Restriction Fragments for YORWdelta24



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BLAST search | Genome Restriction Map | Design Primers for this sequence


The currently selected gene/sequence is :

YORWdelta24 on chromosome XV from coordinates 975913 to 976244.

seqfile=/share/crumb/www-data/html/tmp/gcgseq.tmp.26390.2

Start End Strand Enzyme_name Restriction_site 5prime 3prime 5primerev 3primerev 33 38 + SpeI ACTAGT 33 37 . . 34 37 + MaeI CTAG 34 36 . . 43 46 + TaiI ACGT 46 42 . . 43 46 + SetI ASST 46 42 . . 43 46 + MaeII ACGT 43 45 . . 45 49 + MaeIII GTNAC 44 49 . . 48 53 + SpeI ACTAGT 48 52 . . 49 52 + MaeI CTAG 49 51 . . 66 70 + Tsp4CI* ACNGT 68 67 . . 75 79 + MboII GAAGA 87 86 . . 81 85 + HgaI GACGC 90 95 . . 93 103 - Hin4I GAYNNNNNVTC 116 111 84 79 109 112 + TspEI AATT 108 112 . . 119 122 + SetI ASST 122 118 . . 119 122 + CviJI RGCY 120 120 . . 119 122 + AluI AGCT 120 120 . . 149 153 + BinI* GGATC 157 158 . . 150 153 + DpnI GATC 151 151 . . 150 153 + BstKTI GATC 152 150 . . 150 153 + MboI GATC 149 153 . . 155 159 + TspDTI ATGAA 170 168 . . 158 163 + SspI AATATT 160 160 . . 162 165 + MseI TTAA 162 164 . . 185 190 + SspI AATATT 187 187 . . 196 199 + TspEI AATT 195 199 . . 206 209 + TspEI AATT 205 209 . . 209 212 + CviRI* TGCA 210 210 . . 213 217 + TfiI GAWTC 213 216 . . 213 217 + HinfI GANTC 213 216 . . 217 227 + BsiYI* CCNNNNNNNGG 223 220 . . 227 231 + TfiI GAWTC 227 230 . . 227 231 + HinfI GANTC 227 230 . . 238 245 + PspXI VCTCGAGB 239 243 . . 238 241 + MnlI CCTC 248 247 . . 238 245 + AbsI CCTCGAGG 239 243 . . 239 244 + SmlI CTYRAG 239 243 . . 239 244 + XhoI CTCGAG 239 243 . . 239 244 + BmeT110I CYCGRG 240 242 . . 239 244 + AvaI CYCGRG 239 243 . . 240 243 + TaqI TCGA 240 242 . . 242 247 + BseRI GAGGAG 257 255 . . 242 245 - MnlI CCTC 235 234 . . 253 256 + MaeI CTAG 253 255 . . 268 271 + SetI ASST 271 267 . . 272 277 + SspI AATATT 274 274 . . 280 283 + CviJI RGCY 281 281 . . 284 287 + MseI TTAA 284 286 . . 296 300 + TfiI GAWTC 296 299 . . 296 300 + HinfI GANTC 296 299 . . 306 309 + TspEI AATT 305 309 . . #--------------------------------------- # # # AbsI: # [CCTCGAGG] # 93 239 # # AluI: # [AGCT] # 120 212 # # AvaI: # [CYCGRG] # 93 239 # # BinI*: # [GGATC] # 157 175 # # BmeT110I: # [CYCGRG] # 92 240 # # BseRI: # [GAGGAG] # 75 257 # # BsiYI*: # [CCNNNNNNNGG] # 109 223 # # BstKTI: # [GATC] # 152 180 # # CviJI: # [RGCY] # 51 120 161 # # CviRI*: # [TGCA] # 122 210 # # DpnI: # [GATC] # 151 181 # # HgaI: # [GACGC] # 90 242 # # Hin4I: # [GAYNNNNNVTC] # 32 84 216 # # HinfI: # [GANTC] # 14 36 69 213 # # MaeI: # [CTAG] # 15 34 79 204 # # MaeII: # [ACGT] # 43 289 # # MaeIII: # [GTNAC] # 44 288 # # MboI: # [GATC] # 149 183 # # MboII: # [GAAGA] # 87 245 # # MnlI: # [CCTC] # 13 84 235 # # MseI: # [TTAA] # 48 122 162 # # PspXI: # [VCTCGAGB] # 93 239 # # SetI: # [ASST] # 46 61 76 149 # # SmlI: # [CTYRAG] # 93 239 # # SpeI: # [ACTAGT] # 15 33 284 # # SspI: # [AATATT] # 27 58 87 160 # # TaiI: # [ACGT] # 46 286 # # TaqI: # [TCGA] # 92 240 # # TfiI: # [GAWTC] # 14 36 69 213 # # Tsp4CI*: # [ACNGT] # 68 264 # # TspDTI: # [ATGAA] # 162 170 # # TspEI: # [AATT] # 10 27 87 100 108 # # XhoI: # [CTCGAG] # 93 239 # #--------------------------------------- #--------------------------------------- # Total_sequences: 1 # Total_length: 332 # Reported_sequences: 1 # Reported_hitcount: 50 #---------------------------------------