Restriction Fragments for YOR329W-A



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The currently selected gene/sequence is :

YOR329W-A on chromosome XV from coordinates 939348 to 939557.

seqfile=/share/crumb/www-data/html/tmp/gcgseq.tmp.11724.2

Start End Strand Enzyme_name Restriction_site 5prime 3prime 5primerev 3primerev 8 12 + MaeIII GTNAC 7 12 . . 13 16 + FatI CATG 12 16 . . 13 16 + NlaIII CATG 16 12 . . 13 16 + CviAII CATG 13 15 . . 19 24 + ApoI RAATTY 19 23 . . 20 23 + TspEI AATT 19 23 . . 26 29 + TaqI TCGA 26 28 . . 29 32 + CviJI RGCY 30 30 . . 30 35 + Cac8I GCNNGC 32 32 . . 33 36 + CviRI* TGCA 34 34 . . 34 39 + BsrDI GCAATG 41 39 . . 39 42 + DpnI GATC 40 40 . . 39 42 + BstKTI GATC 41 39 . . 39 42 + MboI GATC 38 42 . . 51 55 + DdeI CTNAG 51 54 . . 54 57 + SetI ASST 57 53 . . 54 57 + CviJI RGCY 55 55 . . 54 57 + AluI AGCT 55 55 . . 63 67 + MboII GAAGA 75 74 . . 68 71 + CviRI* TGCA 69 69 . . 66 70 - SfaNI GCATC 56 60 . . 75 78 + TspEI AATT 74 78 . . 87 92 + EcoRI GAATTC 87 91 . . 87 92 + ApoI RAATTY 87 91 . . 88 91 + TspEI AATT 87 91 . . 100 105 + EcoRI GAATTC 100 104 . . 100 105 + ApoI RAATTY 100 104 . . 101 104 + TspEI AATT 100 104 . . 107 110 + SetI ASST 110 106 . . 119 123 - BslFI GGGAC 104 108 . . 135 140 + Hpy166II GTNNAC 137 137 . . 135 140 + HpaI GTTAAC 137 137 . . 135 140 + HindII GTYRAC 137 137 . . 136 139 + MseI TTAA 136 138 . . #--------------------------------------- # # # AluI: # [AGCT] # 55 155 # # ApoI: # [RAATTY] # 13 19 68 110 # # BslFI: # [GGGAC] # 104 106 # # BsrDI: # [GCAATG] # 41 169 # # BstKTI: # [GATC] # 41 169 # # Cac8I: # [GCNNGC] # 32 178 # # CviAII: # [CATG] # 13 197 # # CviJI: # [RGCY] # 25 30 155 # # CviRI*: # [TGCA] # 34 35 141 # # DdeI: # [CTNAG] # 51 159 # # DpnI: # [GATC] # 40 170 # # EcoRI: # [GAATTC] # 13 87 110 # # FatI: # [CATG] # 12 198 # # HindII: # [GTYRAC] # 73 137 # # HpaI: # [GTTAAC] # 73 137 # # Hpy166II: # [GTNNAC] # 73 137 # # MaeIII: # [GTNAC] # 7 203 # # MboI: # [GATC] # 38 172 # # MboII: # [GAAGA] # 75 135 # # MseI: # [TTAA] # 74 136 # # NlaIII: # [CATG] # 16 194 # # SetI: # [ASST] # 53 57 100 # # SfaNI: # [GCATC] # 56 154 # # TaqI: # [TCGA] # 26 184 # # TspEI: # [AATT] # 13 13 19 55 110 # #--------------------------------------- #--------------------------------------- # Total_sequences: 1 # Total_length: 210 # Reported_sequences: 1 # Reported_hitcount: 34 #---------------------------------------