Restriction Fragments for YNR003W-A



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BLAST search | Genome Restriction Map | Design Primers for this sequence


The currently selected gene/sequence is :

YNR003W-A on chromosome XIV from coordinates 634420 to 634518.

seqfile=/share/crumb/www-data/html/tmp/gcgseq.tmp.29873.2

Start End Strand Enzyme_name Restriction_site 5prime 3prime 5primerev 3primerev 6 11 + ApoI RAATTY 6 10 . . 7 10 + TspEI AATT 6 10 . . 10 14 - MboII GAAGA 2 1 . . 13 17 - MboII GAAGA 5 4 . . 15 19 - TspDTI ATGAA 5 3 . . 20 23 + MnlI CCTC 30 29 . . 17 21 - FokI GGATG 3 7 . . 17 21 - BseGI GGATG 16 14 . . 27 30 + CviJI RGCY 28 28 . . 36 39 + SetI ASST 39 35 . . 36 41 + BspMI ACCTGC 45 49 . . 37 47 + BsiYI* CCNNNNNNNGG 43 40 . . 41 44 + MnlI CCTC 51 50 . . 44 47 + HpaII CCGG 44 46 . . 46 49 + CviJI RGCY 47 47 . . 47 52 + Cac8I GCNNGC 49 49 . . 53 56 + MnlI CCTC 63 62 . . 53 63 + BsiYI* CCNNNNNNNGG 59 56 . . 57 60 + SetI ASST 60 56 . . 58 63 + StyI CCWWGG 58 62 . . 58 63 + SecI* CCNNGG 58 62 . . 55 59 - HphI GGTGA 47 46 . . 64 68 - TspDTI ATGAA 54 52 . . 74 79 + BsmI GAATGC 80 78 . . 83 87 + DdeI CTNAG 83 86 . . 86 89 + SetI ASST 89 85 . . 88 92 + Tsp45I GTSAC 87 92 . . 88 92 + MaeIII GTNAC 87 92 . . 94 99 + SfeI* CTRYAG 94 98 . . #--------------------------------------- # # # ApoI: # [RAATTY] # 6 93 # # BseGI: # [GGATG] # 16 83 # # BsiYI*: # [CCNNNNNNNGG] # 16 40 43 # # BsmI: # [GAATGC] # 19 80 # # BspMI: # [ACCTGC] # 45 54 # # Cac8I: # [GCNNGC] # 49 50 # # CviJI: # [RGCY] # 19 28 52 # # DdeI: # [CTNAG] # 16 83 # # FokI: # [GGATG] # 3 96 # # HpaII: # [CCGG] # 44 55 # # HphI: # [GGTGA] # 47 52 # # MaeIII: # [GTNAC] # 12 87 # # MboII: # [GAAGA] # 2 3 94 # # MnlI: # [CCTC] # 12 21 30 36 # # SecI*: # [CCNNGG] # 41 58 # # SetI: # [ASST] # 10 21 29 39 # # SfeI*: # [CTRYAG] # 5 94 # # StyI: # [CCWWGG] # 41 58 # # Tsp45I: # [GTSAC] # 12 87 # # TspDTI: # [ATGAA] # 5 45 49 # # TspEI: # [AATT] # 6 93 # #--------------------------------------- #--------------------------------------- # Total_sequences: 1 # Total_length: 99 # Reported_sequences: 1 # Reported_hitcount: 29 #---------------------------------------