Restriction Fragments for PRM1/YNL279W



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The currently selected gene/sequence is :

PRM1/YNL279W on chromosome XIV from coordinates 110917 to 112902.

seqfile=/share/crumb/www-data/html/tmp/gcgseq.tmp.15883.2

Start End Strand Enzyme_name Restriction_site 5prime 3prime 5primerev 3primerev 5 8 - AciI CCGC 5 7 . . 3 8 - BsrBI CCGCTC 5 5 . . 10 15 + AhaIII* TTTAAA 12 12 . . 11 14 + MseI TTAA 11 13 . . 23 26 + CviRI* TGCA 24 24 . . 25 30 + MfeI CAATTG 25 29 . . 26 29 + TspEI AATT 25 29 . . 31 35 + HphI GGTGA 43 42 . . 32 36 + Tsp45I GTSAC 31 36 . . 32 36 + MaeIII GTNAC 31 36 . . 29 34 - TaqII CACCCA 19 17 . . 34 44 + Hin4I GAYNNNNNVTC 25 20 57 52 38 41 + CviJI RGCY 39 39 . . 53 56 + CviJI RGCY 54 54 . . 52 57 - TsoI TARCCA 42 40 . . 63 68 + Hpy166II GTNNAC 65 65 . . 63 68 + BssNAI GTATAC 65 65 . . 63 68 + AccI GTMKAC 64 66 . . 78 82 + BlsI GCNGC 80 79 . . 78 82 + BisI GCNGC 79 80 . . 78 82 + TseI GCWGC 78 81 . . 81 91 + MwoI GCNNNNNNNGC 87 84 . . 81 86 + Cac8I GCNNGC 83 83 . . 81 86 + BmtI GCTAGC 85 81 . . 81 86 + NheI GCTAGC 81 85 . . 82 85 + MaeI CTAG 82 84 . . 78 82 - BbvI GCAGC 65 69 . . 85 90 + BsrDI GCAATG 92 90 . . 91 96 + Eco57MI CTGRAG 112 110 . . 91 96 + Eco57I CTGAAG 112 110 . . 94 99 + HindIII AAGCTT 94 98 . . 95 98 + SetI ASST 98 94 . . 95 98 + CviJI RGCY 96 96 . . 95 98 + AluI AGCT 96 96 . . 123 128 + NspI RCATGY 127 123 . . 124 127 + FatI CATG 123 127 . . 124 127 + NlaIII CATG 127 123 . . 124 127 + CviAII CATG 124 126 . . 136 140 + BsmAI GTCTC 141 145 . . 139 143 + Hpy188I TCNGA 141 140 . . 145 148 + TaiI ACGT 148 144 . . 145 148 + SetI ASST 148 144 . . 145 148 + MaeII ACGT 145 147 . . 159 164 + MfeI CAATTG 159 163 . . 160 163 + TspEI AATT 159 163 . . 164 168 + MaeIII GTNAC 163 168 . . 167 171 + Tsp4CI* ACNGT 169 168 . . 175 179 + TfiI GAWTC 175 178 . . 175 179 + HinfI GANTC 175 178 . . 207 211 + TauI GCSGC 210 207 . . 207 211 + BlsI GCNGC 209 208 . . 207 211 + BisI GCNGC 208 209 . . 208 211 + AciI CCGC 208 210 . . 219 222 + SetI ASST 222 218 . . 225 228 + FatI CATG 224 228 . . 225 228 + NlaIII CATG 228 224 . . 225 228 + CviAII CATG 225 227 . . 232 235 + TspEI AATT 231 235 . . 242 245 + TaqI TCGA 242 244 . . 242 247 + Hpy178III* TCNNGA 243 245 . . 246 250 - Hin4II* CCTTC 240 239 . . 256 261 + BseRI GAGGAG 271 269 . . 256 259 - MnlI CCTC 249 248 . . 262 266 + Tsp4CI* ACNGT 264 263 . . 259 263 - BsmAI GTCTC 253 257 . . 266 269 + MseI TTAA 266 268 . . 270 273 + SetI ASST 273 269 . . 270 273 + CviJI RGCY 271 271 . . 270 273 + AluI AGCT 271 271 . . 277 280 + MaeI CTAG 277 279 . . 283 286 + TaiI ACGT 286 282 . . 283 286 + SetI ASST 286 282 . . 283 286 + MaeII ACGT 283 285 . . 280 284 - BsmAI GTCTC 274 278 . . 280 285 - Esp3I CGTCTC 274 278 . . 280 290 - Hin4I GAYNNNNNVTC 303 298 271 266 304 309 + Cac8I GCNNGC 306 306 . . 310 313 - MnlI CCTC 303 302 . . 314 317 + CviJI RGCY 315 315 . . 319 324 + Hpy166II GTNNAC 321 321 . . 335 338 + SetI ASST 338 334 . . 336 346 + BsiYI* CCNNNNNNNGG 342 339 . . 345 350 + SduI GDGCHC 349 345 . . 345 350 + BseSI GKGCMC 349 345 . . 373 377 - BceAI ACGGC 358 360 . . 382 387 + KpnI GGTACC 386 382 . . 382 387 + NlaIV GGNNCC 384 384 . . 382 387 + HgiCI* GGYRCC 382 386 . . 382 387 + Acc65I GGTACC 382 386 . . 383 386 + Csp6I GTAC 383 385 . . 379 383 - BccI CCATC 373 374 . . 383 386 + RsaI GTAC 384 384 . . 385 389 + Tsp4CI* ACNGT 387 386 . . 386 391 + DsaI* CCRYGG 386 390 . . 386 391 + SecI* CCNNGG 386 390 . . 388 393 + Hpy166II GTNNAC 390 390 . . 392 395 + TaiI ACGT 395 391 . . 392 395 + SetI ASST 395 391 . . 392 395 + MaeII ACGT 392 394 . . 424 427 + SetI ASST 427 423 . . 424 427 + CviJI RGCY 425 425 . . 424 427 + AluI AGCT 425 425 . . 426 430 + DdeI CTNAG 426 429 . . 439 443 + Tsp4CI* ACNGT 441 440 . . 453 456 + CviJI RGCY 454 454 . . 452 457 - TsoI TARCCA 442 440 . . 458 462 + TspDTI ATGAA 473 471 . . 461 464 + TspEI AATT 460 464 . . 465 470 - BciVI GTATCC 459 458 . . 472 475 + CviJI RGCY 473 473 . . 506 511 + BclI TGATCA 506 510 . . 507 510 + DpnI GATC 508 508 . . 507 510 + BstKTI GATC 509 507 . . 507 510 + MboI GATC 506 510 . . 513 516 + CviJI RGCY 514 514 . . 513 516 + HaeIII GGCC 514 514 . . 514 518 + TauI GCSGC 517 514 . . 514 518 + BlsI GCNGC 516 515 . . 514 518 + BisI GCNGC 515 516 . . 515 518 + AciI CCGC 515 517 . . 517 521 + SfaNI GCATC 526 530 . . 518 522 - FokI GGATG 504 508 . . 518 522 - BseGI GGATG 517 515 . . 531 540 + XmnI GAANNNNTTC 535 535 . . 531 536 + ApoI RAATTY 531 535 . . 532 535 + TspEI AATT 531 535 . . 543 546 + SetI ASST 546 542 . . 544 548 + HphI GGTGA 556 555 . . 557 561 + Tsp4CI* ACNGT 559 558 . . 560 564 + MaeIII GTNAC 559 564 . . 564 567 + FatI CATG 563 567 . . 564 567 + NlaIII CATG 567 563 . . 564 567 + CviAII CATG 564 566 . . 567 572 + ZraI GACGTC 569 569 . . 567 575 + Tth111I GACNNNGTC 570 571 . . 567 572 + AcyI GRCGYC 568 570 . . 567 572 + AatII GACGTC 571 567 . . 568 571 + TaiI ACGT 571 567 . . 568 571 + SetI ASST 571 567 . . 568 571 + MaeII ACGT 568 570 . . 569 573 + Hpy99I CGWCG 573 568 . . 586 591 + Hpy166II GTNNAC 588 588 . . 586 591 + HindII GTYRAC 588 588 . . 584 588 - HgaI GACGC 573 578 . . 592 595 + MseI TTAA 592 594 . . 593 598 + TsoI TARCCA 609 607 . . 604 607 + Hin6I GCGC 604 606 . . 604 607 + GlaI GCGC 605 605 . . 604 607 + HhaI GCGC 606 604 . . 613 616 + TspEI AATT 612 616 . . 625 629 + Hin4II* CCTTC 635 634 . . 629 632 + MnlI CCTC 639 638 . . 643 648 + HindIII AAGCTT 643 647 . . 644 647 + SetI ASST 647 643 . . 644 647 + CviJI RGCY 645 645 . . 644 647 + AluI AGCT 645 645 . . 649 653 + MboII GAAGA 661 660 . . 649 654 - Ksp632I* CTCTTC 644 647 . . 666 670 + HgaI GACGC 675 680 . . 666 671 + AcyI GRCGYC 667 669 . . 670 673 + HpaII CCGG 670 672 . . 680 685 + SecI* CCNNGG 680 684 . . 681 685 + BssKI CCNGG 680 685 . . 681 685 + BseBI CCWGG 682 683 . . 681 685 + ScrFI CCNGG 682 683 . . 681 685 + EcoRII CCWGG 680 685 . . 683 686 + SetI ASST 686 682 . . 686 689 + MseI TTAA 686 688 . . 702 713 + PpiI GAACNNNNNCTC 694 689 726 721 704 707 + SetI ASST 707 703 . . 705 715 + BsiYI* CCNNNNNNNGG 711 708 . . 708 711 + DpnI GATC 709 709 . . 708 711 + BstKTI GATC 710 708 . . 708 711 + MboI GATC 707 711 . . 714 719 + NlaIV GGNNCC 716 716 . . 719 723 + Hin4II* CCTTC 729 728 . . 725 729 + TspDTI ATGAA 740 738 . . 732 736 + Hpy188I TCNGA 734 733 . . 735 739 + MboII GAAGA 747 746 . . 747 750 + CviJI RGCY 748 748 . . 747 750 + HaeIII GGCC 748 748 . . 748 758 + MwoI GCNNNNNNNGC 754 751 . . 748 752 - BceAI ACGGC 733 735 . . 753 758 + BsmI GAATGC 759 757 . . 757 762 + Cac8I GCNNGC 759 759 . . 770 774 + Hpy188I TCNGA 772 771 . . 761 772 - BcgI CGANNNNNNTGC 784 782 750 748 778 781 + SetI ASST 781 777 . . 779 782 + MnlI CCTC 789 788 . . 781 785 - TspGWI ACGGA 771 769 . . 775 785 - BaeI ACNNNNGTAYC 800 795 767 762 789 792 + Csp6I GTAC 789 791 . . 789 792 + RsaI GTAC 790 790 . . 790 795 + SnaBI TACGTA 792 792 . . 790 795 + BsaAI YACGTR 792 792 . . 791 794 + TaiI ACGT 794 790 . . 791 794 + SetI ASST 794 790 . . 791 794 + MaeII ACGT 791 793 . . 793 796 + Csp6I GTAC 793 795 . . 793 796 + RsaI GTAC 794 794 . . 795 798 + SetI ASST 798 794 . . 796 799 + MnlI CCTC 806 805 . . 804 808 - BslFI GGGAC 789 793 . . 815 819 + Tsp4CI* ACNGT 817 816 . . 817 822 + TatI WGTACW 817 821 . . 817 822 + ScaI AGTACT 819 819 . . 818 821 + Csp6I GTAC 818 820 . . 818 821 + RsaI GTAC 819 819 . . 820 824 + BsrI ACTGG 825 823 . . 820 825 + BfiI ACTGGG 830 829 . . 833 837 - FokI GGATG 819 823 . . 833 837 - BseGI GGATG 832 830 . . 844 848 + Hpy188I TCNGA 846 845 . . 848 853 + ApoI RAATTY 848 852 . . 849 852 + TspEI AATT 848 852 . . 855 858 + CviJI RGCY 856 856 . . 855 858 + HaeIII GGCC 856 856 . . 866 870 + BccI CCATC 874 875 . . 873 877 + BslFI GGGAC 887 891 . . 876 881 + BspLU11I* ACATGT 876 880 . . 876 881 + NspI RCATGY 880 876 . . 876 881 + AflIII ACRYGT 876 880 . . 877 880 + FatI CATG 876 880 . . 877 880 + NlaIII CATG 880 876 . . 877 880 + CviAII CATG 877 879 . . 881 886 + Hpy178III* TCNNGA 882 884 . . 890 895 + TsoI TARCCA 906 904 . . 891 894 + CviJI RGCY 892 892 . . 894 903 + MslI CAYNNNNRTG 898 898 . . 894 903 + OliI CACNNNNGTG 898 898 . . 895 899 + Tsp4CI* ACNGT 897 896 . . 904 907 + CviRI* TGCA 905 905 . . 910 914 + Tsp4CI* ACNGT 912 911 . . 928 938 + MwoI GCNNNNNNNGC 934 931 . . 937 942 + BtgZI GCGATG 952 956 . . 942 947 + NarI GGCGCC 943 945 . . 942 947 + KasI GGCGCC 942 946 . . 942 947 + DinI GGCGCC 944 944 . . 942 947 + HaeII RGCGCY 946 942 . . 942 947 + NlaIV GGNNCC 944 944 . . 942 947 + AcyI GRCGYC 943 945 . . 942 947 + HgiCI* GGYRCC 942 946 . . 943 946 + Hin6I GCGC 943 945 . . 943 946 + GlaI GCGC 944 944 . . 943 953 + MwoI GCNNNNNNNGC 949 946 . . 939 943 - BccI CCATC 933 934 . . 943 946 + HhaI GCGC 945 943 . . 947 957 + BsiYI* CCNNNNNNNGG 953 950 . . 951 954 + CviRI* TGCA 952 952 . . 953 956 + FatI CATG 952 956 . . 953 956 + NlaIII CATG 956 952 . . 953 956 + CviAII CATG 953 955 . . 959 963 + TspDTI ATGAA 974 972 . . 968 971 + SetI ASST 971 967 . . 968 971 + CviJI RGCY 969 969 . . 968 971 + AluI AGCT 969 969 . . 969 979 + MwoI GCNNNNNNNGC 975 972 . . 971 976 + Hpy178III* TCNNGA 972 974 . . 972 977 + Eco57MI CTGRAG 993 991 . . 972 977 + GsuI CTGGAG 993 991 . . 977 982 + NarI GGCGCC 978 980 . . 977 982 + KasI GGCGCC 977 981 . . 977 982 + DinI GGCGCC 979 979 . . 977 982 + HaeII RGCGCY 981 977 . . 977 982 + NlaIV GGNNCC 979 979 . . 977 982 + AcyI GRCGYC 978 980 . . 977 982 + HgiCI* GGYRCC 977 981 . . 975 978 - MnlI CCTC 968 967 . . 978 981 + Hin6I GCGC 978 980 . . 978 981 + GlaI GCGC 979 979 . . 978 981 + HhaI GCGC 980 978 . . 986 989 - AciI CCGC 986 988 . . 995 999 - BsmAI GTCTC 989 993 . . 995 1000 - Eco31I GGTCTC 989 993 . . 1004 1009 + NspI RCATGY 1008 1004 . . 1005 1008 + FatI CATG 1004 1008 . . 1005 1008 + NlaIII CATG 1008 1004 . . 1005 1008 + CviAII CATG 1005 1007 . . 1008 1018 + MwoI GCNNNNNNNGC 1014 1011 . . 1008 1014 + EspI* GCTNAGC 1009 1012 . . 1009 1013 + DdeI CTNAG 1009 1012 . . 1013 1018 + Cac8I GCNNGC 1015 1015 . . 1009 1013 - BspCNI CTCAG 1001 999 . . 1009 1013 - BseMII CTCAG 1000 998 . . 1021 1025 + TfiI GAWTC 1021 1024 . . 1021 1025 + HinfI GANTC 1021 1024 . . 1026 1031 + Hpy166II GTNNAC 1028 1028 . . 1026 1031 + BssNAI GTATAC 1028 1028 . . 1026 1031 + AccI GTMKAC 1027 1029 . . 1030 1033 + TaiI ACGT 1033 1029 . . 1030 1033 + SetI ASST 1033 1029 . . 1030 1033 + MaeII ACGT 1030 1032 . . 1041 1047 + TspRI CASTGNN 1047 1038 . . 1040 1044 - BsrI ACTGG 1040 1038 . . 1058 1061 + TspEI AATT 1057 1061 . . 1065 1070 + XhoII RGATCY 1065 1069 . . 1066 1069 + DpnI GATC 1067 1067 . . 1066 1069 + BstKTI GATC 1068 1066 . . 1066 1069 + MboI GATC 1065 1069 . . 1066 1070 - BinI* GGATC 1060 1061 . . 1077 1082 + XhoII RGATCY 1077 1081 . . 1078 1081 + DpnI GATC 1079 1079 . . 1078 1081 + BstKTI GATC 1080 1078 . . 1078 1081 + MboI GATC 1077 1081 . . 1081 1084 + MnlI CCTC 1091 1090 . . 1078 1082 - BinI* GGATC 1072 1073 . . 1095 1100 + BalI TGGCCA 1097 1097 . . 1095 1100 + CfrI YGGCCR 1095 1099 . . 1096 1099 + CviJI RGCY 1097 1097 . . 1096 1099 + HaeIII GGCC 1097 1097 . . 1113 1116 + CviRI* TGCA 1114 1114 . . 1114 1119 + Cac8I GCNNGC 1116 1116 . . 1110 1115 - BsrDI GCAATG 1109 1107 . . 1117 1120 + SetI ASST 1120 1116 . . 1117 1120 + CviJI RGCY 1118 1118 . . 1117 1120 + AluI AGCT 1118 1118 . . 1123 1128 + EcoP15I CAGCAG 1153 1155 . . 1125 1130 + BtsI GCAGTG 1132 1130 . . 1126 1132 + TspRI CASTGNN 1132 1123 . . 1139 1142 + FatI CATG 1138 1142 . . 1139 1142 + NlaIII CATG 1142 1138 . . 1139 1142 + CviAII CATG 1139 1141 . . 1156 1161 + Cac8I GCNNGC 1158 1158 . . 1159 1162 + CviJI RGCY 1160 1160 . . 1163 1167 + FokI GGATG 1176 1180 . . 1163 1167 + BseGI GGATG 1169 1167 . . 1164 1174 + Hin4I GAYNNNNNVTC 1155 1150 1187 1182 1164 1174 - Hin4I GAYNNNNNVTC 1187 1182 1155 1150 1177 1181 + MaeIII GTNAC 1176 1181 . . 1180 1183 + SetI ASST 1183 1179 . . 1192 1196 - HphI GGTGA 1184 1183 . . 1242 1245 + CviJI RGCY 1243 1243 . . 1252 1255 + SetI ASST 1255 1251 . . 1253 1256 + MnlI CCTC 1263 1262 . . 1255 1259 + Hpy188I TCNGA 1257 1256 . . 1262 1267 + SduI GDGCHC 1266 1262 . . 1262 1267 + HgiAI* GWGCWC 1266 1262 . . 1265 1271 + TspRI CASTGNN 1271 1262 . . 1265 1273 + DraIII CACNNNGTG 1270 1267 . . 1266 1270 + Tsp4CI* ACNGT 1268 1267 . . 1281 1284 + TspEI AATT 1280 1284 . . 1295 1300 + ApoI RAATTY 1295 1299 . . 1296 1299 + TspEI AATT 1295 1299 . . 1294 1305 - TstI CACNNNNNNTCC 1318 1313 1286 1281 1306 1309 + CviRI* TGCA 1307 1307 . . 1308 1313 + NdeI CATATG 1309 1311 . . 1316 1319 + TspEI AATT 1315 1319 . . 1322 1327 + Hpy178III* TCNNGA 1323 1325 . . 1322 1327 + BspHI TCATGA 1322 1326 . . 1323 1326 + FatI CATG 1322 1326 . . 1323 1326 + NlaIII CATG 1326 1322 . . 1323 1326 + CviAII CATG 1323 1325 . . 1331 1337 + TspRI CASTGNN 1337 1328 . . 1332 1336 + Tsp4CI* ACNGT 1334 1333 . . 1336 1339 + MseI TTAA 1336 1338 . . 1351 1354 + CviJI RGCY 1352 1352 . . 1356 1360 - TspDTI ATGAA 1346 1344 . . 1375 1379 + HphI GGTGA 1387 1386 . . 1376 1380 + Tsp45I GTSAC 1375 1380 . . 1376 1380 + MaeIII GTNAC 1375 1380 . . 1372 1376 - BccI CCATC 1366 1367 . . 1377 1388 + BdaI TGANNNNNNTCA 1366 1364 1400 1398 1379 1383 + BceAI ACGGC 1395 1397 . . 1377 1388 - BdaI TGANNNNNNTCA 1400 1398 1366 1364 1389 1394 + ApoI RAATTY 1389 1393 . . 1390 1393 + TspEI AATT 1389 1393 . . 1396 1401 + Eco57MI CTGRAG 1417 1415 . . 1396 1401 + Eco57I CTGAAG 1417 1415 . . 1403 1406 + MaeI CTAG 1403 1405 . . 1407 1413 + TspRI CASTGNN 1413 1404 . . 1407 1412 - BtsI GCAGTG 1406 1404 . . 1413 1417 + Hpy99I CGWCG 1417 1412 . . 1415 1418 + TaqI TCGA 1415 1417 . . 1411 1415 - BceAI ACGGC 1396 1398 . . 1406 1417 - BcgI CGANNNNNNTGC 1429 1427 1395 1393 1435 1438 + CviJI RGCY 1436 1436 . . 1436 1446 + MwoI GCNNNNNNNGC 1442 1439 . . 1449 1453 + Hpy188I TCNGA 1451 1450 . . 1474 1478 + TspGWI ACGGA 1489 1487 . . 1477 1481 - BsmAI GTCTC 1471 1475 . . 1477 1482 - Eco31I GGTCTC 1471 1475 . . 1491 1496 + Hpy178III* TCNNGA 1492 1494 . . 1531 1536 + Hpy166II GTNNAC 1533 1533 . . 1540 1544 + Tsp4CI* ACNGT 1542 1541 . . 1541 1547 + TspRI CASTGNN 1547 1538 . . 1544 1549 + BalI TGGCCA 1546 1546 . . 1544 1549 + CfrI YGGCCR 1544 1548 . . 1545 1548 + CviJI RGCY 1546 1546 . . 1545 1548 + HaeIII GGCC 1546 1546 . . 1551 1554 + FatI CATG 1550 1554 . . 1551 1554 + NlaIII CATG 1554 1550 . . 1551 1554 + CviAII CATG 1551 1553 . . 1554 1557 + DpnI GATC 1555 1555 . . 1554 1557 + BstKTI GATC 1556 1554 . . 1554 1557 + MboI GATC 1553 1557 . . 1558 1562 + Hpy188I TCNGA 1560 1559 . . 1598 1604 + TspRI CASTGNN 1604 1595 . . 1598 1603 - BtsI GCAGTG 1597 1595 . . 1615 1619 + TspDTI ATGAA 1630 1628 . . 1621 1625 + Tsp4CI* ACNGT 1623 1622 . . 1622 1627 + DsaI* CCRYGG 1622 1626 . . 1622 1627 + SecI* CCNNGG 1622 1626 . . 1628 1632 + Hpy188I TCNGA 1630 1629 . . 1630 1634 + FokI GGATG 1643 1647 . . 1630 1634 + BseGI GGATG 1636 1634 . . 1627 1632 - MmeI TCCRAC 1608 1606 . . 1649 1652 + SetI ASST 1652 1648 . . 1649 1652 + CviJI RGCY 1650 1650 . . 1649 1652 + AluI AGCT 1650 1650 . . 1665 1669 - Hin4II* CCTTC 1659 1658 . . 1669 1674 + BsrDI GCAATG 1676 1674 . . 1675 1678 + TaiI ACGT 1678 1674 . . 1675 1678 + SetI ASST 1678 1674 . . 1675 1678 + MaeII ACGT 1675 1677 . . 1674 1679 - BtrI CACGTC 1676 1676 . . 1680 1684 + TfiI GAWTC 1680 1683 . . 1680 1684 + HinfI GANTC 1680 1683 . . 1683 1688 + Hpy178III* TCNNGA 1684 1686 . . 1692 1695 + CviJI RGCY 1693 1693 . . 1693 1699 + EspI* GCTNAGC 1694 1697 . . 1694 1698 + DdeI CTNAG 1694 1697 . . 1694 1698 + BspCNI CTCAG 1707 1705 . . 1694 1698 + BseMII CTCAG 1708 1706 . . 1696 1701 + PvuII CAGCTG 1698 1698 . . 1696 1701 + NspBII* CMGCKG 1698 1698 . . 1697 1700 + SetI ASST 1700 1696 . . 1697 1700 + CviJI RGCY 1698 1698 . . 1697 1700 + AluI AGCT 1698 1698 . . 1698 1702 + BlsI GCNGC 1700 1699 . . 1698 1702 + BisI GCNGC 1699 1700 . . 1698 1702 + TseI GCWGC 1698 1701 . . 1700 1703 + CviRI* TGCA 1701 1701 . . 1698 1702 - BbvI GCAGC 1685 1689 . . 1706 1711 + Hpy178III* TCNNGA 1707 1709 . . 1707 1712 + BmeT110I CYCGRG 1708 1710 . . 1707 1712 + AvaI CYCGRG 1707 1711 . . 1713 1716 + TspEI AATT 1712 1716 . . 1714 1719 + VspI ATTAAT 1715 1717 . . 1715 1718 + MseI TTAA 1715 1717 . . 1720 1724 + BslFI GGGAC 1734 1738 . . 1734 1739 + Cac8I GCNNGC 1736 1736 . . 1737 1740 + SetI ASST 1740 1736 . . 1737 1740 + CviJI RGCY 1738 1738 . . 1737 1740 + AluI AGCT 1738 1738 . . 1773 1779 + TspRI CASTGNN 1779 1770 . . 1776 1779 + CviRI* TGCA 1777 1777 . . 1777 1782 + Cac8I GCNNGC 1779 1779 . . 1773 1778 - BtsI GCAGTG 1772 1770 . . 1779 1789 + FalI AAGNNNNNCTT 1770 1765 1802 1797 1780 1783 + SetI ASST 1783 1779 . . 1780 1783 + CviJI RGCY 1781 1781 . . 1780 1783 + AluI AGCT 1781 1781 . . 1779 1789 - FalI AAGNNNNNCTT 1802 1797 1770 1765 1792 1796 + TauI GCSGC 1795 1792 . . 1792 1796 + BlsI GCNGC 1794 1793 . . 1792 1796 + BisI GCNGC 1793 1794 . . 1793 1796 + AciI CCGC 1793 1795 . . 1809 1813 + BsrI ACTGG 1814 1812 . . 1810 1815 + Eco57MI CTGRAG 1831 1829 . . 1810 1815 + GsuI CTGGAG 1831 1829 . . 1817 1820 + SetI ASST 1820 1816 . . 1837 1841 - Hin4II* CCTTC 1831 1830 . . 1845 1850 + AhaIII* TTTAAA 1847 1847 . . 1846 1849 + MseI TTAA 1846 1848 . . 1850 1855 + ApoI RAATTY 1850 1854 . . 1851 1854 + TspEI AATT 1850 1854 . . 1856 1860 + Hpy188I TCNGA 1858 1857 . . 1860 1863 + SetI ASST 1863 1859 . . 1860 1863 + CviJI RGCY 1861 1861 . . 1860 1863 + AluI AGCT 1861 1861 . . 1868 1872 + Tsp4CI* ACNGT 1870 1869 . . 1891 1895 + Tsp4CI* ACNGT 1893 1892 . . 1896 1899 + CviJI RGCY 1897 1897 . . 1898 1903 + StyI CCWWGG 1898 1902 . . 1898 1903 + SecI* CCNNGG 1898 1902 . . 1912 1915 - AciI CCGC 1912 1914 . . 1919 1922 + CviJI RGCY 1920 1920 . . 1924 1927 + Csp6I GTAC 1924 1926 . . 1924 1927 + RsaI GTAC 1925 1925 . . 1927 1932 + MfeI CAATTG 1927 1931 . . 1928 1931 + TspEI AATT 1927 1931 . . 1934 1945 + BstXI CCANNNNNNTGG 1941 1937 . . 1938 1941 + SetI ASST 1941 1937 . . 1938 1941 + CviJI RGCY 1939 1939 . . 1938 1941 + AluI AGCT 1939 1939 . . 1947 1950 + TspEI AATT 1946 1950 . . 1952 1956 + Hpy188I TCNGA 1954 1953 . . 1959 1962 + TaiI ACGT 1962 1958 . . 1959 1962 + SetI ASST 1962 1958 . . 1959 1962 + MaeII ACGT 1959 1961 . . 1962 1966 - MboII GAAGA 1954 1953 . . 1961 1966 - BbvII* GAAGAC 1954 1958 . . 1971 1974 + CviJI RGCY 1972 1972 . . 1975 1978 + SetI ASST 1978 1974 . . #--------------------------------------- # # # AatII: # [GACGTC] # 571 1415 # # Acc65I: # [GGTACC] # 382 1604 # # AccI: # [GTMKAC] # 64 959 963 # # AciI: # [CCGC] # 5 74 119 203 307 471 # 807 # # AcyI: # [GRCGYC] # 35 99 276 568 1008 # # AflIII: # [ACRYGT] # 876 1110 # # AhaIII*: # [TTTAAA] # 12 139 1835 # # AluI: # [AGCT] # 40 43 47 48 78 80 # 96 149 154 175 220 324 # 532 # # ApoI: # [RAATTY] # 94 136 317 447 461 531 # # AvaI: # [CYCGRG] # 279 1707 # # BaeI: # [ACNNNNGTAYC] # 33 767 1186 # # BalI: # [TGGCCA] # 440 449 1097 # # BbvI: # [GCAGC] # 65 301 1620 # # BbvII*: # [GAAGAC] # 32 1954 # # BccI: # [CCATC] # 59 373 433 501 620 # # BceAI: # [ACGGC] # 1 358 375 590 662 # # BcgI: # [CGANNNNNNTGC] # 34 34 557 611 750 # # BciVI: # [GTATCC] # 459 1527 # # BclI: # [TGATCA] # 506 1480 # # BdaI: # [TGANNNNNNTCA] # 0 0 34 586 1366 # # BfiI: # [ACTGGG] # 830 1156 # # BinI*: # [GGATC] # 12 914 1060 # # BisI: # [GCNGC] # 79 94 129 193 307 1184 # # BlsI: # [GCNGC] # 80 94 129 192 307 1184 # # BmeT110I: # [CYCGRG] # 278 1708 # # BmtI: # [GCTAGC] # 85 1901 # # BsaAI: # [YACGTR] # 792 1194 # # BseBI: # [CCWGG] # 682 1304 # # BseGI: # [GGATG] # 315 337 350 467 517 # # BseMII: # [CTCAG] # 278 708 1000 # # BseRI: # [GAGGAG] # 271 1715 # # BseSI: # [GKGCMC] # 349 1637 # # BsiYI*: # [CCNNNNNNNGG] # 242 342 369 1033 # # BslFI: # [GGGAC] # 98 252 789 847 # # BsmAI: # [GTCTC] # 21 112 141 482 515 715 # # BsmI: # [GAATGC] # 759 1227 # # BspCNI: # [CTCAG] # 279 706 1001 # # BspHI: # [TCATGA] # 664 1322 # # BspLU11I*: # [ACATGT] # 876 1110 # # BsrBI: # [CCGCTC] # 5 1981 # # BsrDI: # [GCAATG] # 92 310 567 1017 # # BsrI: # [ACTGG] # 172 215 774 825 # # BssKI: # [CCNGG] # 680 1306 # # BssNAI: # [GTATAC] # 65 958 963 # # BstKTI: # [GATC] # 12 201 358 430 476 509 # # BstXI: # [CCANNNNNNTGG] # 45 1941 # # BtgZI: # [GCGATG] # 952 1034 # # BtrI: # [CACGTC] # 310 1676 # # BtsI: # [GCAGTG] # 175 191 214 274 1132 # # Cac8I: # [GCNNGC] # 42 43 83 101 207 223 # 256 453 578 # # CfrI: # [YGGCCR] # 442 449 1095 # # Csp6I: # [GTAC] # 4 25 62 383 406 1106 # # CviAII: # [CATG] # 52 76 101 124 134 184 # 228 313 339 435 # # CviJI: # [RGCY] # 5 14 15 19 19 21 # 23 29 33 36 36 39 # 40 41 42 42 43 43 # 44 77 80 83 84 103 # 104 108 109 110 110 128 # 131 175 # # CviRI*: # [TGCA] # 24 47 76 162 193 209 # 394 881 # # DdeI: # [CTNAG] # 292 426 583 685 # # DinI: # [GGCGCC] # 35 944 1007 # # DpnI: # [GATC] # 12 201 358 431 476 508 # # DraIII: # [CACNNNGTG] # 716 1270 # # DsaI*: # [CCRYGG] # 364 386 1236 # # Eco31I: # [GGTCTC] # 482 515 989 # # Eco57I: # [CTGAAG] # 112 569 1305 # # Eco57MI: # [CTGRAG] # 112 155 414 424 881 # # EcoP15I: # [CAGCAG] # 833 1153 # # EcoRII: # [CCWGG] # 680 1306 # # Esp3I: # [CGTCTC] # 274 1712 # # EspI*: # [GCTNAGC] # 292 685 1009 # # FalI: # [AAGNNNNNCTT] # 0 0 32 184 1770 # # FatI: # [CATG] # 52 76 101 123 134 184 # 228 313 339 436 # # FokI: # [GGATG] # 315 343 357 467 504 # # GlaI: # [GCGC] # 35 339 605 1007 # # GsuI: # [CTGGAG] # 155 838 993 # # HaeII: # [RGCGCY] # 35 946 1005 # # HaeIII: # [GGCC] # 108 234 241 440 449 514 # # HgaI: # [GACGC] # 102 573 1311 # # HgiAI*: # [GWGCWC] # 720 1266 # # HgiCI*: # [GGYRCC] # 35 382 560 1009 # # HhaI: # [GCGC] # 35 339 606 1006 # # Hin4I: # [GAYNNNNNVTC] # 0 0 25 32 32 32 # 214 799 852 # # Hin4II*: # [CCTTC] # 94 155 172 240 395 930 # # Hin6I: # [GCGC] # 35 339 604 1008 # # HindII: # [GTYRAC] # 588 1398 # # HindIII: # [AAGCTT] # 94 549 1343 # # HinfI: # [GANTC] # 175 306 659 846 # # HpaII: # [CCGG] # 670 1316 # # HphI: # [GGTGA] # 43 203 513 599 628 # # Hpy166II: # [GTNNAC] # 65 69 198 256 440 453 # 505 # # Hpy178III*: # [TCNNGA] # 23 90 169 192 243 279 # 351 639 # # Hpy188I: # [TCNGA] # 32 38 70 74 96 109 # 141 194 228 411 593 # # Hpy99I: # [CGWCG] # 569 573 844 # # KasI: # [GGCGCC] # 35 942 1009 # # KpnI: # [GGTACC] # 386 1600 # # Ksp632I*: # [CTCTTC] # 644 1342 # # MaeI: # [CTAG] # 82 195 583 1126 # # MaeII: # [ACGT] # 27 109 138 145 176 223 # 239 284 645 # # MaeIII: # [GTNAC] # 31 132 199 396 611 617 # # MboI: # [GATC] # 12 201 358 433 476 506 # # MboII: # [GAAGA] # 32 86 661 1207 # # MfeI: # [CAATTG] # 25 59 134 1768 # # MmeI: # [TCCRAC] # 378 1608 # # MnlI: # [CCTC] # 17 54 123 150 162 172 # 249 336 723 # # MseI: # [TTAA] # 11 94 131 140 255 326 # 379 650 # # MslI: # [CAYNNNNRTG] # 898 1088 # # MwoI: # [GCNNNNNNNGC] # 15 26 39 87 180 428 # 544 667 # # NarI: # [GGCGCC] # 35 943 1008 # # NdeI: # [CATATG] # 677 1309 # # NheI: # [GCTAGC] # 81 1905 # # NlaIII: # [CATG] # 52 76 101 127 134 184 # 228 313 339 432 # # NlaIV: # [GGNNCC] # 35 228 332 384 1007 # # NspBII*: # [CMGCKG] # 288 1698 # # NspI: # [RCATGY] # 127 128 753 978 # # OliI: # [CACNNNNGTG] # 898 1088 # # PpiI: # [GAACNNNNNCTC] # 32 694 1260 # # PvuII: # [CAGCTG] # 288 1698 # # RsaI: # [GTAC] # 4 25 61 384 406 1106 # # ScaI: # [AGTACT] # 819 1167 # # ScrFI: # [CCNGG] # 682 1304 # # SduI: # [GDGCHC] # 349 720 917 # # SecI*: # [CCNNGG] # 88 276 294 386 942 # # SetI: # [ASST] # 4 8 13 13 16 21 # 21 22 25 26 32 37 # 39 40 43 43 50 51 # 52 57 62 63 72 74 # 74 76 78 87 98 119 # 173 397 # # SfaNI: # [GCATC] # 526 1460 # # SnaBI: # [TACGTA] # 792 1194 # # StyI: # [CCWWGG] # 88 1898 # # TaiI: # [ACGT] # 24 109 138 148 176 223 # 239 284 645 # # TaqI: # [TCGA] # 242 571 1173 # # TaqII: # [CACCCA] # 19 1967 # # TatI: # [WGTACW] # 817 1169 # # TauI: # [GCSGC] # 191 210 307 1278 # # TfiI: # [GAWTC] # 175 306 659 846 # # TseI: # [GCWGC] # 78 288 1620 # # TsoI: # [TARCCA] # 42 167 297 400 1080 # # Tsp45I: # [GTSAC] # 31 611 1344 # # Tsp4CI*: # [ACNGT] # 15 23 54 66 80 81 # 93 95 118 123 169 208 # 247 258 356 # # TspDTI: # [ATGAA] # 234 267 284 356 372 473 # # TspEI: # [AATT] # 15 19 20 25 40 71 # 72 74 77 81 134 138 # 209 223 229 236 323 # # TspGWI: # [ACGGA] # 497 718 771 # # TspRI: # [CASTGNN] # 57 66 76 85 134 139 # 175 207 1047 # # TstI: # [CACNNNNNNTCC] # 32 668 1286 # # Tth111I: # [GACNNNGTC] # 570 1416 # # VspI: # [ATTAAT] # 271 1715 # # XhoII: # [RGATCY] # 12 909 1065 # # XmnI: # [GAANNNNTTC] # 535 1451 # # ZraI: # [GACGTC] # 569 1417 # #--------------------------------------- #--------------------------------------- # Total_sequences: 1 # Total_length: 1986 # Reported_sequences: 1 # Reported_hitcount: 494 #---------------------------------------