Restriction Fragments for LYP1/YNL268W



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The currently selected gene/sequence is :

LYP1/YNL268W on chromosome XIV from coordinates 138550 to 140385.

seqfile=/share/crumb/www-data/html/tmp/gcgseq.tmp.4624.2

Start End Strand Enzyme_name Restriction_site 5prime 3prime 5primerev 3primerev 7 10 + SetI ASST 10 6 . . 14 18 + MaeIII GTNAC 13 18 . . 25 28 + TaiI ACGT 28 24 . . 25 28 + SetI ASST 28 24 . . 25 28 + MaeII ACGT 25 27 . . 29 39 + BsiYI* CCNNNNNNNGG 35 32 . . 29 39 + PflMI CCANNNNNTGG 35 32 . . 38 42 + BslFI GGGAC 52 56 . . 62 72 + MwoI GCNNNNNNNGC 68 65 . . 71 76 + NspI RCATGY 75 71 . . 71 76 + Cac8I GCNNGC 73 73 . . 71 76 + SphI GCATGC 75 71 . . 72 75 + FatI CATG 71 75 . . 72 75 + NlaIII CATG 75 71 . . 72 75 + CviAII CATG 72 74 . . 74 77 + CviRI* TGCA 75 75 . . 80 83 + TspEI AATT 79 83 . . 88 92 + MboII GAAGA 100 99 . . 88 93 + BbvII* GAAGAC 95 99 . . 103 106 + FatI CATG 102 106 . . 103 106 + NlaIII CATG 106 102 . . 103 106 + CviAII CATG 103 105 . . 108 112 - BccI CCATC 102 103 . . 120 125 + XhoII RGATCY 120 124 . . 121 124 + DpnI GATC 122 122 . . 121 124 + BstKTI GATC 123 121 . . 121 124 + MboI GATC 120 124 . . 121 125 - BinI* GGATC 115 116 . . 162 166 + Tsp4CI* ACNGT 164 163 . . 164 169 + TatI WGTACW 164 168 . . 165 168 + Csp6I GTAC 165 167 . . 165 168 + RsaI GTAC 166 166 . . 184 187 + FatI CATG 183 187 . . 184 187 + NlaIII CATG 187 183 . . 184 187 + CviAII CATG 184 186 . . 194 197 + CviRI* TGCA 195 195 . . 191 196 - BsrDI GCAATG 190 188 . . 198 201 + SetI ASST 201 197 . . 203 206 + Hin6I GCGC 203 205 . . 203 206 + GlaI GCGC 204 204 . . 203 206 + HhaI GCGC 205 203 . . 206 211 + MfeI CAATTG 206 210 . . 207 210 + TspEI AATT 206 210 . . 219 224 + ApoI RAATTY 219 223 . . 220 223 + TspEI AATT 219 223 . . 223 226 + TaqI TCGA 223 225 . . 232 235 + TspEI AATT 231 235 . . 237 242 + Hpy166II GTNNAC 239 239 . . 237 242 + HpaI GTTAAC 239 239 . . 237 242 + HindII GTYRAC 239 239 . . 238 241 + MseI TTAA 238 240 . . 248 251 + CviRI* TGCA 249 249 . . 256 260 + BsmAI GTCTC 261 265 . . 261 266 + Hpy178III* TCNNGA 262 264 . . 261 266 + BspHI TCATGA 261 265 . . 262 265 + FatI CATG 261 265 . . 262 265 + NlaIII CATG 265 261 . . 262 265 + CviAII CATG 262 264 . . 263 267 + TspDTI ATGAA 278 276 . . 275 278 + MseI TTAA 275 277 . . 282 286 + FokI GGATG 295 299 . . 282 286 + BseGI GGATG 288 286 . . 280 283 - MnlI CCTC 273 272 . . 284 288 + TspDTI ATGAA 299 297 . . 286 290 + MboII GAAGA 298 297 . . 289 293 + MboII GAAGA 301 300 . . 294 297 + CviJI RGCY 295 295 . . 297 307 + BsiYI* CCNNNNNNNGG 303 300 . . 304 307 - MnlI CCTC 297 296 . . 312 317 + AflIII ACRYGT 312 316 . . 313 318 + BsaAI YACGTR 315 315 . . 313 318 + PmaCI CACGTG 315 315 . . 314 317 + TaiI ACGT 317 313 . . 314 317 + SetI ASST 317 313 . . 314 317 + MaeII ACGT 314 316 . . 318 322 + MboII GAAGA 330 329 . . 319 329 + FalI AAGNNNNNCTT 310 305 342 337 318 323 - Ksp632I* CTCTTC 313 316 . . 324 327 + CviJI RGCY 325 325 . . 319 329 - FalI AAGNNNNNCTT 342 337 310 305 342 351 + MslI CAYNNNNRTG 346 346 . . 354 357 + CviRI* TGCA 355 355 . . 356 364 + DraIII CACNNNGTG 361 358 . . 358 361 + MaeI CTAG 358 360 . . 360 363 + SetI ASST 363 359 . . 365 368 + Csp6I GTAC 365 367 . . 365 368 + RsaI GTAC 366 366 . . 374 377 + Csp6I GTAC 374 376 . . 374 377 + RsaI GTAC 375 375 . . 376 380 + BsrI ACTGG 381 379 . . 405 410 + SmlI CTYRAG 405 409 . . 405 410 + Bce83I* CTTGAG 426 424 . . 415 420 + Cac8I GCNNGC 417 417 . . 418 421 + CviJI RGCY 419 419 . . 418 421 + HaeIII GGCC 419 419 . . 418 422 + BmgT120I GGNCC 419 420 . . 418 422 + AsuI* GGNCC 418 421 . . 427 433 + SanDI GGGWCCC 428 431 . . 427 433 + PpuMI RGGWCCY 428 431 . . 427 433 + DraII RGGNCCY 428 431 . . 427 432 + NlaIV GGNNCC 429 429 . . 428 433 + NlaIV GGNNCC 430 430 . . 428 432 + BmgT120I GGNCC 429 430 . . 428 432 + AvaII GGWCC 428 431 . . 428 432 + AsuI* GGNCC 428 431 . . 429 433 - BslFI GGGAC 414 418 . . 444 453 + MslI CAYNNNNRTG 448 448 . . 450 453 + FatI CATG 449 453 . . 450 453 + NlaIII CATG 453 449 . . 450 453 + CviAII CATG 450 452 . . 448 452 - TspDTI ATGAA 438 436 . . 453 458 + SduI GDGCHC 457 453 . . 453 458 + BseSI GKGCMC 457 453 . . 454 459 + NlaIV GGNNCC 456 456 . . 454 459 + HgiCI* GGYRCC 454 458 . . 463 468 + Hpy166II GTNNAC 465 465 . . 463 468 + AccI GTMKAC 464 466 . . 472 476 + MaeIII GTNAC 471 476 . . 477 488 + BstXI CCANNNNNNTGG 484 480 . . 480 484 + Tsp45I GTSAC 479 484 . . 480 484 + MaeIII GTNAC 479 484 . . 477 481 - BsrI ACTGG 477 475 . . 476 481 - BfiI ACTGGG 471 470 . . 482 490 + DraIII CACNNNGTG 487 484 . . 487 491 + HphI GGTGA 499 498 . . 495 498 + CviJI RGCY 496 496 . . 492 496 - BccI CCATC 486 487 . . 494 499 - TsoI TARCCA 484 482 . . 499 502 + TaiI ACGT 502 498 . . 499 502 + SetI ASST 502 498 . . 499 502 + MaeII ACGT 499 501 . . 511 515 + Tsp45I GTSAC 510 515 . . 511 515 + MaeIII GTNAC 510 515 . . 525 531 + TspRI CASTGNN 531 522 . . 526 530 + Tsp4CI* ACNGT 528 527 . . 534 539 + AsuII TTCGAA 535 537 . . 535 538 + TaqI TCGA 535 537 . . 537 541 + MboII GAAGA 549 548 . . 537 546 + XmnI GAANNNNTTC 541 541 . . 538 548 + FalI AAGNNNNNCTT 529 524 561 556 541 544 + SetI ASST 544 540 . . 537 542 - Ksp632I* CTCTTC 532 535 . . 540 543 - MnlI CCTC 533 532 . . 538 548 - FalI AAGNNNNNCTT 561 556 529 524 551 557 + AarI CACCTGC 561 565 . . 552 555 + SetI ASST 555 551 . . 552 557 + BspMI ACCTGC 561 565 . . 553 563 + BsiYI* CCNNNNNNNGG 559 556 . . 550 554 - HphI GGTGA 542 541 . . 555 558 + CviRI* TGCA 556 556 . . 556 561 - BsmI GAATGC 556 554 . . 572 576 + BceAI ACGGC 588 590 . . 574 577 + CviJI RGCY 575 575 . . 578 583 + BspLU11I* ACATGT 578 582 . . 578 583 + NspI RCATGY 582 578 . . 578 583 + AflIII ACRYGT 578 582 . . 579 582 + FatI CATG 578 582 . . 579 582 + NlaIII CATG 582 578 . . 579 582 + CviAII CATG 579 581 . . 581 586 + TatI WGTACW 581 585 . . 582 585 + Csp6I GTAC 582 584 . . 582 585 + RsaI GTAC 583 583 . . 584 588 + BsrI ACTGG 589 587 . . 591 596 + MfeI CAATTG 591 595 . . 592 595 + TspEI AATT 591 595 . . 597 600 + CviJI RGCY 598 598 . . 617 620 + SetI ASST 620 616 . . 616 619 - MnlI CCTC 609 608 . . 630 635 + BalI TGGCCA 632 632 . . 630 635 + CfrI YGGCCR 630 634 . . 631 634 + CviJI RGCY 632 632 . . 631 634 + HaeIII GGCC 632 632 . . 647 651 + BsrI ACTGG 652 650 . . 664 678 + XcmI CCANNNNNNNNNTGG 671 670 . . 670 674 + TauI GCSGC 673 670 . . 670 674 + BlsI GCNGC 672 671 . . 670 674 + BisI GCNGC 671 672 . . 672 675 + CviJI RGCY 673 673 . . 672 675 + HaeIII GGCC 673 673 . . 673 683 + MwoI GCNNNNNNNGC 679 676 . . 670 673 - AciI CCGC 670 672 . . 674 678 + BssKI CCNGG 673 678 . . 674 678 + BseBI CCWGG 675 676 . . 674 678 + ScrFI CCNGG 675 676 . . 674 678 + EcoRII CCWGG 673 678 . . 696 699 + TspEI AATT 695 699 . . 709 713 + TspDTI ATGAA 724 722 . . 711 720 + XmnI GAANNNNTTC 715 715 . . 711 716 + ApoI RAATTY 711 715 . . 712 715 + TspEI AATT 711 715 . . 736 740 + HphI GGTGA 748 747 . . 739 744 + ApoI RAATTY 739 743 . . 740 743 + TspEI AATT 739 743 . . 751 756 - TaqII CACCCA 741 739 . . 756 759 + CviJI RGCY 757 757 . . 756 759 + HaeIII GGCC 757 757 . . 758 761 + MnlI CCTC 768 767 . . 764 767 + MseI TTAA 764 766 . . 773 778 + TsoI TARCCA 789 787 . . 774 777 + CviJI RGCY 775 775 . . 785 789 + MaeIII GTNAC 784 789 . . 815 818 - AciI CCGC 815 817 . . 820 825 + XhoII RGATCY 820 824 . . 820 825 + NlaIV GGNNCC 822 822 . . 820 825 + BamHI GGATCC 820 824 . . 820 824 + BinI* GGATC 828 829 . . 821 824 + DpnI GATC 822 822 . . 821 824 + BstKTI GATC 823 821 . . 821 824 + MboI GATC 820 824 . . 821 825 - BinI* GGATC 815 816 . . 828 832 + BssKI CCNGG 827 832 . . 828 832 + BseBI CCWGG 829 830 . . 828 833 + SecI* CCNNGG 828 832 . . 828 832 + ScrFI CCNGG 829 830 . . 828 832 + EcoRII CCWGG 827 832 . . 830 836 + DraII RGGNCCY 831 834 . . 831 837 + DraII RGGNCCY 832 835 . . 831 836 + SduI GDGCHC 835 831 . . 831 836 + Bsp120I GGGCCC 831 835 . . 831 836 + NlaIV GGNNCC 833 833 . . 831 835 + BmgT120I GGNCC 832 833 . . 831 836 + HgiJII* GRGCYC 835 831 . . 831 836 + BseSI GKGCMC 835 831 . . 831 835 + AsuI* GGNCC 831 834 . . 831 836 + ApaI GGGCCC 835 831 . . 832 835 + CviJI RGCY 833 833 . . 832 835 + HaeIII GGCC 833 833 . . 832 836 + BmgT120I GGNCC 833 834 . . 832 836 + AsuI* GGNCC 832 835 . . 846 854 + AlwNI CAGNNNCTG 851 848 . . 847 850 + SetI ASST 850 846 . . 849 852 + Csp6I GTAC 849 851 . . 849 852 + RsaI GTAC 850 850 . . 851 855 + BsrI ACTGG 856 854 . . 852 857 + Eco57MI CTGRAG 873 871 . . 852 857 + GsuI CTGGAG 873 871 . . 861 867 + PfoI TCCNGGA 861 866 . . 862 873 + BstXI CCANNNNNNTGG 869 865 . . 862 866 + BssKI CCNGG 861 866 . . 862 866 + BseBI CCWGG 863 864 . . 862 866 + ScrFI CCNGG 863 864 . . 862 866 + EcoRII CCWGG 861 866 . . 865 870 + NlaIV GGNNCC 867 867 . . 867 870 + CviJI RGCY 868 868 . . 869 873 + BssKI CCNGG 868 873 . . 869 873 + BseBI CCWGG 870 871 . . 869 874 + SecI* CCNNGG 869 873 . . 869 873 + ScrFI CCNGG 870 871 . . 869 873 + EcoRII CCWGG 868 873 . . 873 878 + NlaIV GGNNCC 875 875 . . 874 878 + BmgT120I GGNCC 875 876 . . 874 878 + AsuI* GGNCC 874 877 . . 875 878 + CviJI RGCY 876 876 . . 875 878 + HaeIII GGCC 876 876 . . 877 881 + BssKI CCNGG 876 881 . . 877 881 + BseBI CCWGG 878 879 . . 877 881 + ScrFI CCNGG 878 879 . . 877 881 + EcoRII CCWGG 876 881 . . 881 885 + SfaNI GCATC 890 894 . . 891 897 + TspRI CASTGNN 897 888 . . 890 894 - BsrI ACTGG 890 888 . . 907 910 + CviJI RGCY 908 908 . . 907 910 + HaeIII GGCC 908 908 . . 904 908 - Hin4II* CCTTC 898 897 . . 908 912 - BceAI ACGGC 893 895 . . 917 921 + Hpy188I TCNGA 919 918 . . 919 923 + FokI GGATG 932 936 . . 919 923 + BseGI GGATG 925 923 . . 924 929 + Eco31I GGTCTC 930 934 . . 920 924 - BccI CCATC 914 915 . . 925 929 + BsmAI GTCTC 930 934 . . 929 932 + MnlI CCTC 939 938 . . 927 932 - BseRI GAGGAG 918 916 . . 937 942 + VspI ATTAAT 938 940 . . 938 941 + MseI TTAA 938 940 . . 943 947 + BlsI GCNGC 945 944 . . 943 947 + BisI GCNGC 944 945 . . 943 947 + TseI GCWGC 943 946 . . 945 948 + CviRI* TGCA 946 946 . . 943 947 - BbvI GCAGC 930 934 . . 951 956 + SnaBI TACGTA 953 953 . . 951 956 + BsaAI YACGTR 953 953 . . 952 955 + TaiI ACGT 955 951 . . 952 955 + SetI ASST 955 951 . . 952 955 + MaeII ACGT 952 954 . . 954 957 + Csp6I GTAC 954 956 . . 954 957 + RsaI GTAC 955 955 . . 957 962 + StyI CCWWGG 957 961 . . 957 962 + SecI* CCNNGG 957 961 . . 960 963 + SetI ASST 963 959 . . 962 965 + Csp6I GTAC 962 964 . . 962 965 + RsaI GTAC 963 963 . . 969 973 + BsrI ACTGG 974 972 . . 977 981 + BinI* GGATC 985 986 . . 978 981 + DpnI GATC 979 979 . . 978 981 + BstKTI GATC 980 978 . . 978 981 + MboI GATC 977 981 . . 983 988 + NspBII* CMGCKG 985 985 . . 983 986 + AciI CCGC 983 985 . . 980 984 - HphI GGTGA 972 971 . . 985 995 + MwoI GCNNNNNNNGC 991 988 . . 988 992 + HphI GGTGA 1000 999 . . 994 998 + TauI GCSGC 997 994 . . 994 998 + BlsI GCNGC 996 995 . . 994 998 + BisI GCNGC 995 996 . . 996 999 + CviJI RGCY 997 997 . . 994 997 - AciI CCGC 994 996 . . 1012 1016 + Tsp4CI* ACNGT 1014 1013 . . 1023 1026 + SetI ASST 1026 1022 . . 1023 1026 + CviJI RGCY 1024 1024 . . 1023 1026 + AluI AGCT 1024 1024 . . 1046 1050 + TfiI GAWTC 1046 1049 . . 1046 1050 + HinfI GANTC 1046 1049 . . 1051 1054 + Csp6I GTAC 1051 1053 . . 1051 1054 + RsaI GTAC 1052 1052 . . 1085 1090 + Hpy166II GTNNAC 1087 1087 . . 1085 1090 + AccI GTMKAC 1086 1088 . . 1089 1093 + BsrI ACTGG 1094 1092 . . 1092 1097 + NlaIV GGNNCC 1094 1094 . . 1105 1109 + TfiI GAWTC 1105 1108 . . 1105 1109 + HinfI GANTC 1105 1108 . . 1120 1130 + MwoI GCNNNNNNNGC 1126 1123 . . 1121 1124 + MaeI CTAG 1121 1123 . . 1129 1139 + MwoI GCNNNNNNNGC 1135 1132 . . 1127 1132 - EcoP15I CAGCAG 1099 1101 . . 1137 1140 + CviRI* TGCA 1138 1138 . . 1138 1142 + SfaNI GCATC 1147 1151 . . 1148 1152 + Hin4II* CCTTC 1158 1157 . . 1144 1148 - HphI GGTGA 1136 1135 . . 1175 1178 + Csp6I GTAC 1175 1177 . . 1175 1178 + RsaI GTAC 1176 1176 . . 1183 1189 + SapI GCTCTTC 1190 1193 . . 1184 1189 + Ksp632I* CTCTTC 1190 1193 . . 1188 1193 + Hpy178III* TCNNGA 1189 1191 . . 1185 1189 - MboII GAAGA 1177 1176 . . 1205 1210 + DsaI* CCRYGG 1205 1209 . . 1205 1210 + SecI* CCNNGG 1205 1209 . . 1204 1208 - BceAI ACGGC 1189 1191 . . 1219 1223 + Tsp4CI* ACNGT 1221 1220 . . 1219 1229 + BaeI ACNNNNGTAYC 1208 1203 1241 1236 1231 1235 + TauI GCSGC 1234 1231 . . 1231 1235 + BlsI GCNGC 1233 1232 . . 1231 1235 + BisI GCNGC 1232 1233 . . 1232 1235 + AciI CCGC 1232 1234 . . 1237 1240 + TspEI AATT 1236 1240 . . 1239 1244 + AsuII TTCGAA 1240 1242 . . 1240 1243 + TaqI TCGA 1240 1242 . . 1246 1251 + Hpy166II GTNNAC 1248 1248 . . 1250 1253 + TaiI ACGT 1253 1249 . . 1250 1253 + SetI ASST 1253 1249 . . 1250 1253 + MaeII ACGT 1250 1252 . . 1255 1260 + NlaIV GGNNCC 1257 1257 . . 1278 1281 + SetI ASST 1281 1277 . . 1278 1281 + CviJI RGCY 1279 1279 . . 1278 1281 + AluI AGCT 1279 1279 . . 1280 1283 + MaeI CTAG 1280 1282 . . 1285 1289 + BsrI ACTGG 1290 1288 . . 1289 1293 + MaeIII GTNAC 1288 1293 . . 1304 1307 + TspEI AATT 1303 1307 . . 1313 1316 + TaiI ACGT 1316 1312 . . 1313 1316 + SetI ASST 1316 1312 . . 1313 1316 + MaeII ACGT 1313 1315 . . 1309 1314 - BciVI GTATCC 1303 1302 . . 1315 1319 + Tsp45I GTSAC 1314 1319 . . 1315 1319 + MaeIII GTNAC 1314 1319 . . 1316 1320 - HphI GGTGA 1308 1307 . . 1333 1343 + BsiYI* CCNNNNNNNGG 1339 1336 . . 1351 1354 + CviRI* TGCA 1352 1352 . . 1353 1359 + TspRI CASTGNN 1359 1350 . . 1357 1361 + BlsI GCNGC 1359 1358 . . 1357 1361 + BisI GCNGC 1358 1359 . . 1357 1361 + TseI GCWGC 1357 1360 . . 1353 1358 - BtsI GCAGTG 1352 1350 . . 1359 1362 + CviRI* TGCA 1360 1360 . . 1355 1360 - EcoP15I CAGCAG 1327 1329 . . 1357 1361 - BbvI GCAGC 1344 1348 . . 1380 1384 + BssKI CCNGG 1379 1384 . . 1380 1384 + BseBI CCWGG 1381 1382 . . 1375 1380 - BsmI GAATGC 1375 1373 . . 1380 1384 + ScrFI CCNGG 1381 1382 . . 1380 1384 + EcoRII CCWGG 1379 1384 . . 1398 1401 + CviRI* TGCA 1399 1399 . . 1399 1409 + MwoI GCNNNNNNNGC 1405 1402 . . 1399 1409 + BstAPI GCANNNNNTGC 1405 1402 . . 1404 1410 + TspRI CASTGNN 1410 1401 . . 1407 1410 + CviRI* TGCA 1408 1408 . . 1404 1409 - BtsI GCAGTG 1403 1401 . . 1412 1415 + MseI TTAA 1412 1414 . . 1415 1419 + BsrI ACTGG 1420 1418 . . 1421 1426 + BclI TGATCA 1421 1425 . . 1422 1425 + DpnI GATC 1423 1423 . . 1422 1425 + BstKTI GATC 1424 1422 . . 1422 1425 + MboI GATC 1421 1425 . . 1440 1443 + CviJI RGCY 1441 1441 . . 1441 1446 - GsaI CCCAGC 1445 1441 . . 1441 1446 - BseYI CCCAGC 1441 1445 . . 1451 1454 + Hin6I GCGC 1451 1453 . . 1451 1454 + GlaI GCGC 1452 1452 . . 1451 1454 + HhaI GCGC 1453 1451 . . 1454 1458 + BssKI CCNGG 1453 1458 . . 1454 1458 + BseBI CCWGG 1455 1456 . . 1454 1458 + ScrFI CCNGG 1455 1456 . . 1454 1458 + EcoRII CCWGG 1453 1458 . . 1456 1461 - TsoI TARCCA 1446 1444 . . 1462 1466 - TspDTI ATGAA 1452 1450 . . 1483 1486 + SetI ASST 1486 1482 . . 1488 1491 + FatI CATG 1487 1491 . . 1488 1491 + NlaIII CATG 1491 1487 . . 1488 1491 + CviAII CATG 1488 1490 . . 1486 1490 - TspDTI ATGAA 1476 1474 . . 1490 1493 + CviRI* TGCA 1491 1491 . . 1491 1496 + Cac8I GCNNGC 1493 1493 . . 1493 1498 + HindIII AAGCTT 1493 1497 . . 1494 1497 + SetI ASST 1497 1493 . . 1494 1497 + CviJI RGCY 1495 1495 . . 1494 1497 + AluI AGCT 1495 1495 . . 1497 1502 + AhaIII* TTTAAA 1499 1499 . . 1498 1501 + MseI TTAA 1498 1500 . . 1505 1509 + Tsp4CI* ACNGT 1507 1506 . . 1506 1511 + DsaI* CCRYGG 1506 1510 . . 1506 1511 + SecI* CCNNGG 1506 1510 . . 1518 1523 + Hpy178III* TCNNGA 1519 1521 . . 1517 1522 - BsiI* CACGAG 1517 1521 . . 1525 1528 + DpnI GATC 1526 1526 . . 1525 1528 + BstKTI GATC 1527 1525 . . 1525 1528 + MboI GATC 1524 1528 . . 1532 1536 + Hin4II* CCTTC 1542 1541 . . 1539 1542 + CviJI RGCY 1540 1540 . . 1539 1542 + HaeIII GGCC 1540 1540 . . 1544 1547 + TspEI AATT 1543 1547 . . 1548 1552 - SfaNI GCATC 1538 1542 . . 1558 1563 + NlaIV GGNNCC 1560 1560 . . 1558 1563 + HgiCI* GGYRCC 1558 1562 . . 1561 1571 + MwoI GCNNNNNNNGC 1567 1564 . . 1570 1574 + BlsI GCNGC 1572 1571 . . 1570 1574 + BisI GCNGC 1571 1572 . . 1570 1574 + BbvI GCAGC 1582 1586 . . 1570 1574 + TseI GCWGC 1570 1573 . . 1572 1575 + CviJI RGCY 1573 1573 . . 1582 1586 + Tsp45I GTSAC 1581 1586 . . 1582 1586 + MaeIII GTNAC 1581 1586 . . 1585 1589 + Tsp4CI* ACNGT 1587 1586 . . 1583 1587 - HphI GGTGA 1575 1574 . . 1597 1601 - TspDTI ATGAA 1587 1585 . . 1602 1607 + StyI CCWWGG 1602 1606 . . 1602 1607 + SecI* CCNNGG 1602 1606 . . 1599 1603 - FokI GGATG 1585 1589 . . 1599 1603 - BseGI GGATG 1598 1596 . . 1607 1612 + NlaIV GGNNCC 1609 1609 . . 1623 1627 - TspGWI ACGGA 1613 1611 . . 1636 1640 + Hpy188I TCNGA 1638 1637 . . 1637 1641 + DdeI CTNAG 1637 1640 . . 1637 1641 - BspCNI CTCAG 1629 1627 . . 1637 1641 - BseMII CTCAG 1628 1626 . . 1665 1669 + TfiI GAWTC 1665 1668 . . 1665 1669 + HinfI GANTC 1665 1668 . . 1674 1677 + CviJI RGCY 1675 1675 . . 1675 1679 - BceAI ACGGC 1660 1662 . . 1684 1688 - TspDTI ATGAA 1674 1672 . . 1711 1714 + CviRI* TGCA 1712 1712 . . 1727 1730 + SetI ASST 1730 1726 . . 1727 1730 + CviJI RGCY 1728 1728 . . 1727 1730 + AluI AGCT 1728 1728 . . 1729 1732 + MaeI CTAG 1729 1731 . . 1732 1736 + MboII GAAGA 1744 1743 . . 1744 1749 + ClaI ATCGAT 1745 1747 . . 1745 1748 + TaqI TCGA 1745 1747 . . 1747 1751 + TfiI GAWTC 1747 1750 . . 1747 1751 + HinfI GANTC 1747 1750 . . 1750 1755 + MmeI TCCRAC 1775 1773 . . 1750 1754 + Hpy188I TCNGA 1752 1751 . . 1757 1761 + MboII GAAGA 1769 1768 . . 1757 1762 - Ksp632I* CTCTTC 1752 1755 . . 1766 1769 + TaqI TCGA 1766 1768 . . 1773 1776 + TspEI AATT 1772 1776 . . 1783 1787 + MboII GAAGA 1795 1794 . . 1783 1788 + BbvII* GAAGAC 1790 1794 . . 1788 1792 + Hpy99I CGWCG 1792 1787 . . 1793 1796 + CviJI RGCY 1794 1794 . . 1796 1800 + DdeI CTNAG 1796 1799 . . 1800 1805 + ApoI RAATTY 1800 1804 . . 1801 1804 + TspEI AATT 1800 1804 . . 1813 1818 + ApoI RAATTY 1813 1817 . . 1814 1817 + TspEI AATT 1813 1817 . . 1821 1824 + CviJI RGCY 1822 1822 . . 1822 1832 + MwoI GCNNNNNNNGC 1828 1825 . . 1822 1826 + BlsI GCNGC 1824 1823 . . 1822 1826 + BisI GCNGC 1823 1824 . . 1822 1826 + TseI GCWGC 1822 1825 . . 1822 1826 - BbvI GCAGC 1809 1813 . . 1823 1828 - EcoP15I CAGCAG 1795 1797 . . 1830 1833 + CviRI* TGCA 1831 1831 . . #--------------------------------------- # # # AarI: # [CACCTGC] # 561 1275 # # AccI: # [GTMKAC] # 464 622 750 # # AciI: # [CCGC] # 11 145 168 238 604 670 # # AflIII: # [ACRYGT] # 266 312 1258 # # AhaIII*: # [TTTAAA] # 337 1499 # # AluI: # [AGCT] # 108 216 233 255 1024 # # AlwNI: # [CAGNNNCTG] # 851 985 # # ApaI: # [GGGCCC] # 835 1001 # # ApoI: # [RAATTY] # 13 23 28 219 492 1061 # # AsuI*: # [GGNCC] # 1 10 42 403 418 962 # # AsuII: # [TTCGAA] # 535 596 705 # # AvaII: # [GGWCC] # 428 1408 # # BaeI: # [ACNNNNGTAYC] # 33 595 1208 # # BalI: # [TGGCCA] # 632 1204 # # BamHI: # [GGATCC] # 820 1016 # # BbvI: # [GCAGC] # 27 227 238 414 930 # # BbvII*: # [GAAGAC] # 46 95 1695 # # BccI: # [CCATC] # 102 384 428 922 # # Bce83I*: # [CTTGAG] # 426 1410 # # BceAI: # [ACGGC] # 176 296 305 471 588 # # BciVI: # [GTATCC] # 533 1303 # # BclI: # [TGATCA] # 415 1421 # # BfiI: # [ACTGGG] # 471 1365 # # BinI*: # [GGATC] # 13 115 157 700 851 # # BisI: # [GCNGC] # 13 51 126 213 237 252 # 273 671 # # BlsI: # [GCNGC] # 12 51 126 213 237 252 # 273 672 # # BmgT120I: # [GGNCC] # 1 10 42 403 419 961 # # BsaAI: # [YACGTR] # 315 638 883 # # BseBI: # [CCWGG] # 7 8 34 74 154 381 # 503 675 # # BseGI: # [GGATG] # 238 288 637 673 # # BseMII: # [CTCAG] # 208 1628 # # BseRI: # [GAGGAG] # 918 918 # # BseSI: # [GKGCMC] # 378 457 1001 # # BseYI: # [CCCAGC] # 395 1441 # # BsiI*: # [CACGAG] # 319 1517 # # BsiYI*: # [CCNNNNNNNGG] # 35 256 268 497 780 # # BslFI: # [GGGAC] # 52 362 1422 # # BsmAI: # [GTCTC] # 261 669 906 # # BsmI: # [GAATGC] # 461 556 819 # # Bsp120I: # [GGGCCC] # 831 1005 # # BspCNI: # [CTCAG] # 207 1629 # # BspHI: # [TCATGA] # 261 1575 # # BspLU11I*: # [ACATGT] # 578 1258 # # BspMI: # [ACCTGC] # 561 1275 # # BsrDI: # [GCAATG] # 190 1646 # # BsrI: # [ACTGG] # 34 63 84 96 112 120 # 130 196 204 381 416 # # BssKI: # [CCNGG] # 7 8 34 74 154 383 # 503 673 # # BstAPI: # [GCANNNNNTGC] # 431 1405 # # BstKTI: # [GATC] # 103 123 157 309 444 700 # # BstXI: # [CCANNNNNNTGG] # 385 484 967 # # BtsI: # [GCAGTG] # 51 433 1352 # # Cac8I: # [GCNNGC] # 73 343 344 1076 # # CfrI: # [YGGCCR] # 630 1206 # # ClaI: # [ATCGAT] # 91 1745 # # Csp6I: # [GTAC] # 8 9 89 105 124 165 # 200 208 267 661 # # CviAII: # [CATG] # 31 72 78 81 129 188 # 348 909 # # CviJI: # [RGCY] # 8 14 18 23 27 28 # 30 32 33 34 35 41 # 45 53 54 58 66 77 # 79 84 89 94 102 162 # 255 295 # # CviRI*: # [TGCA] # 5 8 9 39 54 75 # 83 106 119 120 192 201 # 214 221 390 # # DdeI: # [CTNAG] # 40 159 1637 # # DpnI: # [GATC] # 103 122 157 310 444 700 # # DraII: # [RGGNCCY] # 1 403 428 1004 # # DraIII: # [CACNNNGTG] # 126 361 1349 # # DsaI*: # [CCRYGG] # 301 330 1205 # # Eco31I: # [GGTCTC] # 906 930 # # Eco57MI: # [CTGRAG] # 873 963 # # EcoP15I: # [CAGCAG] # 41 228 468 1099 # # EcoRII: # [CCWGG] # 7 8 34 74 154 383 # 503 673 # # FalI: # [AAGNNNNNCTT] # 0 0 0 0 32 32 # 187 310 1275 # # FatI: # [CATG] # 31 71 78 81 129 188 # 349 909 # # FokI: # [GGATG] # 251 295 637 653 # # GlaI: # [GCGC] # 204 384 1248 # # GsaI: # [CCCAGC] # 391 1445 # # GsuI: # [CTGGAG] # 873 963 # # HaeIII: # [GGCC] # 32 41 43 76 84 213 # 296 419 632 # # HgiCI*: # [GGYRCC] # 278 454 1104 # # HgiJII*: # [GRGCYC] # 835 1001 # # HhaI: # [GCGC] # 205 383 1248 # # Hin4II*: # [CCTTC] # 260 294 384 898 # # Hin6I: # [GCGC] # 203 385 1248 # # HindII: # [GTYRAC] # 239 1597 # # HindIII: # [AAGCTT] # 343 1493 # # HinfI: # [GANTC] # 59 82 89 560 1046 # # HpaI: # [GTTAAC] # 239 1597 # # HphI: # [GGTGA] # 28 43 136 172 206 224 # 261 267 499 # # Hpy166II: # [GTNNAC] # 161 226 239 588 622 # # Hpy178III*: # [TCNNGA] # 262 317 330 927 # # Hpy188I: # [TCNGA] # 84 114 719 919 # # Hpy99I: # [CGWCG] # 44 1792 # # Ksp632I*: # [CTCTTC] # 84 219 313 562 658 # # MaeI: # [CTAG] # 107 159 358 449 763 # # MaeII: # [ACGT] # 25 63 185 289 298 453 # 523 # # MaeIII: # [GTNAC] # 8 13 26 31 255 267 # 274 458 504 # # MboI: # [GATC] # 103 120 157 312 444 700 # # MboII: # [GAAGA] # 3 25 26 29 41 100 # 198 219 567 628 # # MfeI: # [CAATTG] # 206 385 1245 # # MmeI: # [TCCRAC] # 61 1775 # # MnlI: # [CCTC] # 24 76 159 171 236 273 # 897 # # MseI: # [TTAA] # 37 86 174 238 338 474 # 489 # # MslI: # [CAYNNNNRTG] # 102 346 1388 # # MwoI: # [GCNNNNNNNGC] # 8 9 68 135 162 261 # 270 312 611 # # NlaIII: # [CATG] # 31 75 78 81 129 188 # 345 909 # # NlaIV: # [GGNNCC] # 1 8 11 26 34 49 # 163 219 227 303 366 429 # # NspBII*: # [CMGCKG] # 851 985 # # NspI: # [RCATGY] # 75 507 1254 # # PflMI: # [CCANNNNNTGG] # 35 1801 # # PfoI: # [TCCNGGA] # 861 975 # # PmaCI: # [CACGTG] # 315 1521 # # PpuMI: # [RGGWCCY] # 428 1408 # # RsaI: # [GTAC] # 8 9 89 105 124 166 # 200 208 267 660 # # SanDI: # [GGGWCCC] # 428 1408 # # SapI: # [GCTCTTC] # 646 1190 # # ScrFI: # [CCNGG] # 7 8 34 74 154 381 # 503 675 # # SduI: # [GDGCHC] # 378 457 1001 # # SecI*: # [CCNNGG] # 41 88 96 234 248 301 # 828 # # SetI: # [ASST] # 8 10 11 11 18 28 # 35 42 46 63 65 105 # 106 116 139 170 173 227 # 230 233 # # SfaNI: # [GCATC] # 257 298 391 890 # # SmlI: # [CTYRAG] # 405 1431 # # SnaBI: # [TACGTA] # 883 953 # # SphI: # [GCATGC] # 75 1761 # # StyI: # [CCWWGG] # 234 645 957 # # TaiI: # [ACGT] # 28 63 185 289 298 453 # 520 # # TaqI: # [TCGA] # 21 70 223 312 505 705 # # TaqII: # [CACCCA] # 741 1095 # # TatI: # [WGTACW] # 164 417 1255 # # TauI: # [GCSGC] # 237 324 602 673 # # TfiI: # [GAWTC] # 59 82 89 560 1046 # # TseI: # [GCWGC] # 14 213 252 414 943 # # TsoI: # [TARCCA] # 305 390 484 657 # # Tsp45I: # [GTSAC] # 31 255 267 479 804 # # Tsp4CI*: # [ACNGT] # 80 164 207 249 286 364 # 486 # # TspDTI: # [ATGAA] # 21 24 87 111 139 162 # 278 286 728 # # TspEI: # [AATT] # 12 13 13 16 23 28 # 28 67 79 104 127 229 # 240 360 497 # # TspGWI: # [ACGGA] # 223 1613 # # TspRI: # [CASTGNN] # 51 366 426 462 531 # # VspI: # [ATTAAT] # 898 938 # # XcmI: # [CCANNNNNNNNNTGG] # 671 1165 # # XhoII: # [RGATCY] # 120 700 1016 # # XmnI: # [GAANNNNTTC] # 174 541 1121 # #--------------------------------------- #--------------------------------------- # Total_sequences: 1 # Total_length: 1836 # Reported_sequences: 1 # Reported_hitcount: 492 #---------------------------------------