Restriction Fragments for ORC1/YML065W



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The currently selected gene/sequence is :

ORC1/YML065W on chromosome XIII from coordinates 142210 to 144954.

seqfile=/share/crumb/www-data/html/tmp/gcgseq.tmp.25722.2

Start End Strand Enzyme_name Restriction_site 5prime 3prime 5primerev 3primerev 9 14 + AclI AACGTT 10 12 . . 10 13 + TaiI ACGT 13 9 . . 10 13 + SetI ASST 13 9 . . 10 13 + MaeII ACGT 10 12 . . 15 19 - Hin4II* CCTTC 9 8 . . 67 72 + ClaI ATCGAT 68 70 . . 68 71 + TaqI TCGA 68 70 . . 70 74 - BccI CCATC 64 65 . . 75 78 + SetI ASST 78 74 . . 74 77 - MnlI CCTC 67 66 . . 78 82 + Hpy188I TCNGA 80 79 . . 81 85 + MboII GAAGA 93 92 . . 81 86 - Ksp632I* CTCTTC 76 79 . . 95 99 + MboII GAAGA 107 106 . . 99 102 + SetI ASST 102 98 . . 95 100 - Ksp632I* CTCTTC 90 93 . . 98 101 - MnlI CCTC 91 90 . . 102 105 + CviRI* TGCA 103 103 . . 121 124 + MseI TTAA 121 123 . . 133 137 + Hpy188I TCNGA 135 134 . . 136 140 - BccI CCATC 130 131 . . 141 144 + TspEI AATT 140 144 . . 143 146 + MseI TTAA 143 145 . . 148 151 + MaeI CTAG 148 150 . . 150 153 + SetI ASST 153 149 . . 157 161 + HphI GGTGA 169 168 . . 171 174 + FatI CATG 170 174 . . 171 174 + NlaIII CATG 174 170 . . 171 174 + CviAII CATG 171 173 . . 173 176 + CviRI* TGCA 174 174 . . 183 186 + CviJI RGCY 184 184 . . 184 188 + TauI GCSGC 187 184 . . 184 188 + BlsI GCNGC 186 185 . . 184 188 + BisI GCNGC 185 186 . . 185 190 + NspBII* CMGCKG 187 187 . . 185 188 + AciI CCGC 185 187 . . 190 194 + BslFI GGGAC 204 208 . . 187 192 - GsaI CCCAGC 191 187 . . 187 192 - BseYI CCCAGC 187 191 . . 199 203 - TspGWI ACGGA 189 187 . . 210 213 + DpnI GATC 211 211 . . 210 213 + BstKTI GATC 212 210 . . 210 213 + MboI GATC 209 213 . . 212 218 + PfoI TCCNGGA 212 217 . . 213 217 + BssKI CCNGG 212 217 . . 213 217 + BseBI CCWGG 214 215 . . 213 217 + ScrFI CCNGG 214 215 . . 213 217 + EcoRII CCWGG 212 217 . . 210 214 - BinI* GGATC 204 205 . . 222 226 - BsmAI GTCTC 216 220 . . 227 230 + MseI TTAA 227 229 . . 235 238 + MseI TTAA 235 237 . . 248 251 + TaqI TCGA 248 250 . . 257 262 + SduI GDGCHC 261 257 . . 257 262 + HgiJII* GRGCYC 261 257 . . 258 261 + CviJI RGCY 259 259 . . 265 268 + SetI ASST 268 264 . . 263 267 - HphI GGTGA 255 254 . . 275 279 - BccI CCATC 269 270 . . 297 300 + SetI ASST 300 296 . . 297 300 + CviJI RGCY 298 298 . . 297 300 + AluI AGCT 298 298 . . 314 317 + MseI TTAA 314 316 . . 318 323 + Hpy178III* TCNNGA 319 321 . . 322 326 + HgaI GACGC 331 336 . . 336 340 + TfiI GAWTC 336 339 . . 336 340 + HinfI GANTC 336 339 . . 345 350 + AhaIII* TTTAAA 347 347 . . 346 349 + MseI TTAA 346 348 . . 349 352 + TspEI AATT 348 352 . . 363 367 + Tsp4CI* ACNGT 365 364 . . 370 374 + Hpy188I TCNGA 372 371 . . 378 381 + CviRI* TGCA 379 379 . . 389 393 + TspDTI ATGAA 404 402 . . 391 402 + PpiI GAACNNNNNCTC 383 378 415 410 393 397 + Tsp4CI* ACNGT 395 394 . . 402 408 + TspRI CASTGNN 408 399 . . 404 409 + PstI CTGCAG 408 404 . . 404 409 + SfeI* CTRYAG 404 408 . . 405 408 + CviRI* TGCA 406 406 . . 406 416 + MwoI GCNNNNNNNGC 412 409 . . 402 407 - BtsI GCAGTG 401 399 . . 410 413 + TspEI AATT 409 413 . . 414 417 + CviJI RGCY 415 415 . . 419 422 + TspEI AATT 418 422 . . 422 425 + CviRI* TGCA 423 423 . . 423 427 + BlsI GCNGC 425 424 . . 423 427 + BisI GCNGC 424 425 . . 423 427 + BbvI GCAGC 435 439 . . 423 427 + TseI GCWGC 423 426 . . 425 428 + SetI ASST 428 424 . . 425 428 + CviJI RGCY 426 426 . . 425 428 + AluI AGCT 426 426 . . 431 434 + MseI TTAA 431 433 . . 449 460 + BstXI CCANNNNNNTGG 456 452 . . 452 455 + TaiI ACGT 455 451 . . 452 455 + SetI ASST 455 451 . . 452 455 + MaeII ACGT 452 454 . . 459 463 + FokI GGATG 472 476 . . 459 463 + BseGI GGATG 465 463 . . 460 464 - BccI CCATC 454 455 . . 494 497 + TaqI TCGA 494 496 . . 496 499 + DpnI GATC 497 497 . . 496 499 + BstKTI GATC 498 496 . . 496 499 + MboI GATC 495 499 . . 498 503 + Hpy178III* TCNNGA 499 501 . . 496 500 - BinI* GGATC 490 491 . . 506 510 - BsmAI GTCTC 500 504 . . 514 518 + Tsp4CI* ACNGT 516 515 . . 533 536 + CviJI RGCY 534 534 . . 538 542 + BsrI ACTGG 543 541 . . 538 543 + BfiI ACTGGG 548 547 . . 547 552 + ApoI RAATTY 547 551 . . 548 551 + TspEI AATT 547 551 . . 553 558 + Hpy166II GTNNAC 555 555 . . 559 564 + VspI ATTAAT 560 562 . . 560 563 + MseI TTAA 560 562 . . 562 567 + SspI AATATT 564 564 . . 570 574 + FokI GGATG 583 587 . . 570 574 + BseGI GGATG 576 574 . . 568 571 - MnlI CCTC 561 560 . . 578 583 + HindIII AAGCTT 578 582 . . 579 582 + SetI ASST 582 578 . . 579 582 + CviJI RGCY 580 580 . . 579 582 + AluI AGCT 580 580 . . 597 602 + NlaIV GGNNCC 599 599 . . 599 602 + CviJI RGCY 600 600 . . 601 606 + StyI CCWWGG 601 605 . . 601 606 + SecI* CCNNGG 601 605 . . 609 612 + CviJI RGCY 610 610 . . 611 616 + SecI* CCNNGG 611 615 . . 612 616 + BssKI CCNGG 611 616 . . 612 616 + BseBI CCWGG 613 614 . . 612 616 + ScrFI CCNGG 613 614 . . 612 616 + EcoRII CCWGG 611 616 . . 617 622 + SspI AATATT 619 619 . . 631 634 + MseI TTAA 631 633 . . 640 644 + BccI CCATC 648 649 . . 648 652 + MboII GAAGA 660 659 . . 657 660 + DpnI GATC 658 658 . . 657 660 + BstKTI GATC 659 657 . . 657 660 + MboI GATC 656 660 . . 666 669 + SetI ASST 669 665 . . 666 672 + PpuMI RGGWCCY 667 670 . . 666 672 + DraII RGGNCCY 667 670 . . 667 671 + BmgT120I GGNCC 668 669 . . 667 671 + AvaII GGWCC 667 670 . . 667 671 + AsuI* GGNCC 667 670 . . 665 668 - MnlI CCTC 658 657 . . 670 673 + MnlI CCTC 680 679 . . 687 690 + CviJI RGCY 688 688 . . 697 701 + BceAI ACGGC 713 715 . . 704 709 + ApoI RAATTY 704 708 . . 705 708 + TspEI AATT 704 708 . . 709 713 + Hpy188I TCNGA 711 710 . . 712 716 + HgaI GACGC 721 726 . . 726 729 + SetI ASST 729 725 . . 726 729 + CviJI RGCY 727 727 . . 726 729 + AluI AGCT 727 727 . . 728 733 + SfeI* CTRYAG 728 732 . . 739 743 + TspGWI ACGGA 754 752 . . 748 751 - MnlI CCTC 741 740 . . 752 756 + Tsp4CI* ACNGT 754 753 . . 758 762 + TspDTI ATGAA 773 771 . . 760 764 + MboII GAAGA 772 771 . . 763 773 + Hin4I GAYNNNNNVTC 754 749 786 781 764 768 + TspDTI ATGAA 779 777 . . 766 770 + TfiI GAWTC 766 769 . . 766 770 + HinfI GANTC 766 769 . . 772 776 + Hpy188I TCNGA 774 773 . . 763 773 - Hin4I GAYNNNNNVTC 786 781 754 749 779 783 + TspDTI ATGAA 794 792 . . 786 790 - TspGWI ACGGA 776 774 . . 790 794 + Hpy188I TCNGA 792 791 . . 793 798 + EcoRV GATATC 795 795 . . 797 800 + TaqI TCGA 797 799 . . 798 802 + Hpy99I CGWCG 802 797 . . 800 803 + TaiI ACGT 803 799 . . 800 803 + SetI ASST 803 799 . . 800 803 + MaeII ACGT 800 802 . . 808 811 - MnlI CCTC 801 800 . . 819 824 + NspBII* CMGCKG 821 821 . . 823 827 + HphI GGTGA 835 834 . . 821 824 - AciI CCGC 821 823 . . 833 836 + AciI CCGC 833 835 . . 842 845 + SetI ASST 845 841 . . 842 845 + CviJI RGCY 843 843 . . 842 845 + AluI AGCT 843 843 . . 844 849 + SmlI CTYRAG 844 848 . . 844 849 + Bce83I* CTTGAG 865 863 . . 847 850 - MnlI CCTC 840 839 . . 850 854 + MboII GAAGA 862 861 . . 853 857 + MboII GAAGA 865 864 . . 856 860 + MboII GAAGA 868 867 . . 856 861 + BbvII* GAAGAC 863 867 . . 862 866 + MboII GAAGA 874 873 . . 865 869 + MboII GAAGA 877 876 . . 868 872 + MboII GAAGA 880 879 . . 868 873 + BbvII* GAAGAC 875 879 . . 874 878 + MboII GAAGA 886 885 . . 874 879 + BbvII* GAAGAC 881 885 . . 880 884 + MboII GAAGA 892 891 . . 883 887 + MboII GAAGA 895 894 . . 883 888 - Ksp632I* CTCTTC 878 881 . . 894 897 + SetI ASST 897 893 . . 894 897 + CviJI RGCY 895 895 . . 894 897 + AluI AGCT 895 895 . . 896 899 + MaeI CTAG 896 898 . . 906 911 + ApoI RAATTY 906 910 . . 907 910 + TspEI AATT 906 910 . . 913 918 + StyI CCWWGG 913 917 . . 913 918 + SecI* CCNNGG 913 917 . . 910 914 - HphI GGTGA 902 901 . . 925 928 + CviJI RGCY 926 926 . . 925 928 + HaeIII GGCC 926 926 . . 923 926 - MnlI CCTC 916 915 . . 926 930 - BceAI ACGGC 911 913 . . 940 943 + MaeI CTAG 940 942 . . 942 945 + SetI ASST 945 941 . . 958 962 + HgaI GACGC 967 972 . . 966 971 + TatI WGTACW 966 970 . . 966 971 + Bsp1407I TGTACA 966 970 . . 967 970 + Csp6I GTAC 967 969 . . 967 970 + RsaI GTAC 968 968 . . 972 975 + SetI ASST 975 971 . . 973 976 + MnlI CCTC 983 982 . . 990 993 + SetI ASST 993 989 . . 989 992 - MnlI CCTC 982 981 . . 995 1000 + Hpy166II GTNNAC 997 997 . . 999 1002 + SetI ASST 1002 998 . . 1005 1010 + XhoII RGATCY 1005 1009 . . 1006 1009 + DpnI GATC 1007 1007 . . 1006 1009 + BstKTI GATC 1008 1006 . . 1006 1009 + MboI GATC 1005 1009 . . 1010 1013 + MaeI CTAG 1010 1012 . . 1006 1010 - BinI* GGATC 1000 1001 . . 1013 1018 + Hpy166II GTNNAC 1015 1015 . . 1018 1021 + AciI CCGC 1018 1020 . . 1019 1022 + FnuDII* CGCG 1020 1020 . . 1020 1030 + MwoI GCNNNNNNNGC 1026 1023 . . 1023 1027 + Hpy188I TCNGA 1025 1024 . . 1020 1024 - HgaI GACGC 1009 1014 . . 1026 1030 - SfaNI GCATC 1016 1020 . . 1035 1040 + EcoRV GATATC 1037 1037 . . 1039 1043 - MboII GAAGA 1031 1030 . . 1043 1046 + FatI CATG 1042 1046 . . 1043 1046 + NlaIII CATG 1046 1042 . . 1043 1046 + CviAII CATG 1043 1045 . . 1041 1045 - TspDTI ATGAA 1031 1029 . . 1050 1053 + CviRI* TGCA 1051 1051 . . 1046 1050 - BceAI ACGGC 1031 1033 . . 1075 1080 + ApoI RAATTY 1075 1079 . . 1076 1079 + TspEI AATT 1075 1079 . . 1097 1100 + MaeI CTAG 1097 1099 . . 1125 1130 + AsuII TTCGAA 1126 1128 . . 1126 1129 + TaqI TCGA 1126 1128 . . 1133 1142 + BsaBI GATNNNNATC 1137 1137 . . 1134 1141 + SwaI ATTTAAAT 1137 1137 . . 1135 1140 + AhaIII* TTTAAA 1137 1137 . . 1136 1139 + MseI TTAA 1136 1138 . . 1142 1147 + SfeI* CTRYAG 1142 1146 . . 1146 1149 + SetI ASST 1149 1145 . . 1146 1149 + CviJI RGCY 1147 1147 . . 1146 1149 + AluI AGCT 1147 1147 . . 1147 1151 + BlsI GCNGC 1149 1148 . . 1147 1151 + BisI GCNGC 1148 1149 . . 1147 1151 + TseI GCWGC 1147 1150 . . 1149 1152 + CviRI* TGCA 1150 1150 . . 1147 1151 - BbvI GCAGC 1134 1138 . . 1162 1165 + MseI TTAA 1162 1164 . . 1167 1171 - TspDTI ATGAA 1157 1155 . . 1173 1176 + SetI ASST 1176 1172 . . 1177 1182 + ApoI RAATTY 1177 1181 . . 1178 1181 + TspEI AATT 1177 1181 . . 1184 1188 + TspGWI ACGGA 1199 1197 . . 1187 1196 + XmnI GAANNNNTTC 1191 1191 . . 1188 1193 + ApoI RAATTY 1188 1192 . . 1189 1192 + TspEI AATT 1188 1192 . . 1195 1199 + Hpy188I TCNGA 1197 1196 . . 1192 1196 - MboII GAAGA 1184 1183 . . 1199 1202 + TspEI AATT 1198 1202 . . 1207 1211 + SfaNI GCATC 1216 1220 . . 1203 1207 - BccI CCATC 1197 1198 . . 1213 1216 + SetI ASST 1216 1212 . . 1226 1229 + TspEI AATT 1225 1229 . . 1228 1231 + MseI TTAA 1228 1230 . . 1245 1249 + SfaNI GCATC 1254 1258 . . 1248 1252 + Hpy188I TCNGA 1250 1249 . . 1263 1266 + TspEI AATT 1262 1266 . . 1284 1288 + Tsp4CI* ACNGT 1286 1285 . . 1293 1298 + Ksp632I* CTCTTC 1299 1302 . . 1294 1298 - MboII GAAGA 1286 1285 . . 1309 1313 + MboII GAAGA 1321 1320 . . 1314 1319 + SspI AATATT 1316 1316 . . 1326 1329 + CviRI* TGCA 1327 1327 . . 1329 1334 + ApoI RAATTY 1329 1333 . . 1330 1333 + TspEI AATT 1329 1333 . . 1347 1352 + Cfr10I RCCGGY 1347 1351 . . 1348 1351 + HpaII CCGG 1348 1350 . . 1350 1353 + CviJI RGCY 1351 1351 . . 1352 1355 + MaeI CTAG 1352 1354 . . 1359 1368 + XmnI GAANNNNTTC 1363 1363 . . 1361 1365 + TspDTI ATGAA 1376 1374 . . 1363 1368 + EcoRI GAATTC 1363 1367 . . 1363 1368 + ApoI RAATTY 1363 1367 . . 1364 1367 + TspEI AATT 1363 1367 . . 1370 1373 + MnlI CCTC 1380 1379 . . 1374 1377 + TspEI AATT 1373 1377 . . 1381 1384 + MseI TTAA 1381 1383 . . 1386 1389 + CviRI* TGCA 1387 1387 . . 1387 1397 + MwoI GCNNNNNNNGC 1393 1390 . . 1387 1397 + BstAPI GCANNNNNTGC 1393 1390 . . 1402 1406 + PleI GAGTC 1410 1411 . . 1402 1406 + MlyI GAGTC 1411 1411 . . 1402 1406 + HinfI GANTC 1402 1405 . . 1402 1412 + BplI GAGNNNNNCTC 1393 1388 1425 1420 1405 1410 + MmeI TCCRAC 1430 1428 . . 1405 1409 + Hpy188I TCNGA 1407 1406 . . 1408 1412 + HinfI GANTC 1408 1411 . . 1408 1412 - PleI GAGTC 1402 1403 . . 1408 1412 - MlyI GAGTC 1402 1402 . . 1402 1412 - BplI GAGNNNNNCTC 1425 1420 1393 1388 1412 1415 + AciI CCGC 1412 1414 . . 1426 1431 + BsaAI YACGTR 1428 1428 . . 1427 1430 + TaiI ACGT 1430 1426 . . 1427 1430 + SetI ASST 1430 1426 . . 1427 1430 + MaeII ACGT 1427 1429 . . 1431 1434 + CviJI RGCY 1432 1432 . . 1436 1439 + Csp6I GTAC 1436 1438 . . 1436 1439 + RsaI GTAC 1437 1437 . . 1441 1451 + EcoNI CCTNNNNNAGG 1445 1446 . . 1441 1445 + BssKI CCNGG 1440 1445 . . 1441 1445 + BseBI CCWGG 1442 1443 . . 1441 1445 + ScrFI CCNGG 1442 1443 . . 1441 1445 + EcoRII CCWGG 1440 1445 . . 1441 1451 + BsiYI* CCNNNNNNNGG 1447 1444 . . 1459 1462 + MseI TTAA 1459 1461 . . 1462 1466 + Tsp4CI* ACNGT 1464 1463 . . 1495 1499 - MboII GAAGA 1487 1486 . . 1494 1499 - BbvII* GAAGAC 1487 1491 . . 1500 1503 + CviRI* TGCA 1501 1501 . . 1499 1504 - BsgI GTGCAG 1484 1482 . . 1568 1572 + Tsp4CI* ACNGT 1570 1569 . . 1571 1575 + MaeIII GTNAC 1570 1575 . . 1597 1602 + Hpy178III* TCNNGA 1598 1600 . . 1606 1609 + SetI ASST 1609 1605 . . 1608 1613 + Hpy166II GTNNAC 1610 1610 . . 1608 1613 + HpaI GTTAAC 1610 1610 . . 1608 1613 + HindII GTYRAC 1610 1610 . . 1609 1612 + MseI TTAA 1609 1611 . . 1613 1616 + FatI CATG 1612 1616 . . 1613 1616 + NlaIII CATG 1616 1612 . . 1613 1616 + CviAII CATG 1613 1615 . . 1618 1622 + BlsI GCNGC 1620 1619 . . 1618 1622 + BisI GCNGC 1619 1620 . . 1618 1622 + BbvI GCAGC 1630 1634 . . 1618 1622 + TseI GCWGC 1618 1621 . . 1620 1623 + SetI ASST 1623 1619 . . 1620 1623 + CviJI RGCY 1621 1621 . . 1620 1623 + AluI AGCT 1621 1621 . . 1630 1634 + PleI GAGTC 1638 1639 . . 1630 1634 + MlyI GAGTC 1639 1639 . . 1630 1634 + HinfI GANTC 1630 1633 . . 1632 1636 + Tsp45I GTSAC 1631 1636 . . 1632 1636 + MaeIII GTNAC 1631 1636 . . 1636 1639 + MaeI CTAG 1636 1638 . . 1648 1653 + AhaIII* TTTAAA 1650 1650 . . 1649 1652 + MseI TTAA 1649 1651 . . 1671 1675 + MboII GAAGA 1683 1682 . . 1692 1697 - MmeI TCCRAC 1673 1671 . . 1698 1709 + BcgI CGANNNNNNTGC 1687 1685 1721 1719 1703 1706 + TaqI TCGA 1703 1705 . . 1705 1709 - SfaNI GCATC 1695 1699 . . 1709 1714 + DsaI* CCRYGG 1709 1713 . . 1709 1714 + StyI CCWWGG 1709 1713 . . 1709 1714 + NcoI CCATGG 1709 1713 . . 1709 1714 + SecI* CCNNGG 1709 1713 . . 1710 1713 + FatI CATG 1709 1713 . . 1710 1713 + NlaIII CATG 1713 1709 . . 1710 1713 + CviAII CATG 1710 1712 . . 1714 1718 + MaeIII GTNAC 1713 1718 . . 1724 1729 + SmlI CTYRAG 1724 1728 . . 1725 1730 + Hpy178III* TCNNGA 1726 1728 . . 1724 1729 - Bce83I* CTTGAG 1709 1707 . . 1736 1741 + TatI WGTACW 1736 1740 . . 1736 1741 + Bsp1407I TGTACA 1736 1740 . . 1737 1740 + Csp6I GTAC 1737 1739 . . 1737 1740 + RsaI GTAC 1738 1738 . . 1741 1744 + TspEI AATT 1740 1744 . . 1749 1754 + MfeI CAATTG 1749 1753 . . 1750 1753 + TspEI AATT 1749 1753 . . 1788 1791 + CviRI* TGCA 1789 1789 . . 1785 1790 - BsrDI GCAATG 1784 1782 . . 1793 1798 + TsoI TARCCA 1809 1807 . . 1794 1797 + CviJI RGCY 1795 1795 . . 1796 1807 + BstXI CCANNNNNNTGG 1803 1799 . . 1818 1821 + TaiI ACGT 1821 1817 . . 1818 1821 + SetI ASST 1821 1817 . . 1818 1821 + MaeII ACGT 1818 1820 . . 1823 1826 + SetI ASST 1826 1822 . . 1823 1826 + CviJI RGCY 1824 1824 . . 1823 1826 + AluI AGCT 1824 1824 . . 1825 1828 + MaeI CTAG 1825 1827 . . 1843 1848 + Hpy178III* TCNNGA 1844 1846 . . 1848 1851 + TspEI AATT 1847 1851 . . 1854 1859 + Hpy166II GTNNAC 1856 1856 . . 1863 1866 + TspEI AATT 1862 1866 . . 1869 1874 + Hpy166II GTNNAC 1871 1871 . . 1872 1878 + TspRI CASTGNN 1878 1869 . . 1873 1877 + BsrI ACTGG 1878 1876 . . 1873 1878 + BfiI ACTGGG 1883 1882 . . 1878 1883 + Hpy166II GTNNAC 1880 1880 . . 1878 1883 + BssNAI GTATAC 1880 1880 . . 1878 1883 + AccI GTMKAC 1879 1881 . . 1884 1894 + MwoI GCNNNNNNNGC 1890 1887 . . 1888 1892 + MboII GAAGA 1900 1899 . . 1892 1895 + SetI ASST 1895 1891 . . 1892 1895 + CviJI RGCY 1893 1893 . . 1892 1895 + AluI AGCT 1893 1893 . . 1888 1893 - Ksp632I* CTCTTC 1883 1886 . . 1888 1894 - SapI GCTCTTC 1883 1886 . . 1912 1915 + MseI TTAA 1912 1914 . . 1918 1923 + Eco57MI CTGRAG 1939 1937 . . 1918 1923 + Eco57I CTGAAG 1939 1937 . . 1920 1924 - Hin4II* CCTTC 1914 1913 . . 1933 1937 + HinfI GANTC 1933 1936 . . 1933 1937 - PleI GAGTC 1927 1928 . . 1933 1937 - MlyI GAGTC 1927 1927 . . 1960 1964 + BsrI ACTGG 1965 1963 . . 1964 1969 + BsrDI GCAATG 1971 1969 . . 1984 1988 + TauI GCSGC 1987 1984 . . 1984 1988 + BlsI GCNGC 1986 1985 . . 1984 1988 + BisI GCNGC 1985 1986 . . 1981 1985 - SfaNI GCATC 1971 1975 . . 1986 1989 + CviJI RGCY 1987 1987 . . 1984 1987 - AciI CCGC 1984 1986 . . 2000 2005 + SfeI* CTRYAG 2000 2004 . . 2002 2006 + Tsp4CI* ACNGT 2004 2003 . . 2006 2009 + MseI TTAA 2006 2008 . . 2010 2020 + MwoI GCNNNNNNNGC 2016 2013 . . 2010 2020 + BstAPI GCANNNNNTGC 2016 2013 . . 2013 2018 + AclI AACGTT 2014 2016 . . 2014 2017 + TaiI ACGT 2017 2013 . . 2014 2017 + SetI ASST 2017 2013 . . 2014 2017 + MaeII ACGT 2014 2016 . . 2021 2026 + Eco57MI CTGRAG 2042 2040 . . 2021 2026 + Eco57I CTGAAG 2042 2040 . . 2023 2027 + MboII GAAGA 2035 2034 . . 2023 2028 + BbvII* GAAGAC 2030 2034 . . 2027 2030 + TaiI ACGT 2030 2026 . . 2027 2030 + SetI ASST 2030 2026 . . 2027 2030 + MaeII ACGT 2027 2029 . . 2026 2031 - BtrI CACGTC 2028 2028 . . 2031 2034 - MnlI CCTC 2024 2023 . . 2043 2048 + SmlI CTYRAG 2043 2047 . . 2043 2048 + AflII CTTAAG 2043 2047 . . 2044 2047 + MseI TTAA 2044 2046 . . 2059 2063 - SfaNI GCATC 2049 2053 . . 2073 2076 + SetI ASST 2076 2072 . . 2073 2076 + CviJI RGCY 2074 2074 . . 2073 2076 + AluI AGCT 2074 2074 . . 2077 2080 + TaqI TCGA 2077 2079 . . 2077 2082 + Hpy178III* TCNNGA 2078 2080 . . 2101 2105 + HphI GGTGA 2113 2112 . . 2106 2109 + CviRI* TGCA 2107 2107 . . 2107 2117 + MwoI GCNNNNNNNGC 2113 2110 . . 2104 2108 - SfaNI GCATC 2094 2098 . . 2111 2115 + MboII GAAGA 2123 2122 . . 2111 2116 - Ksp632I* CTCTTC 2106 2109 . . 2111 2117 - SapI GCTCTTC 2106 2109 . . 2123 2126 + SetI ASST 2126 2122 . . 2121 2125 - Hin4II* CCTTC 2115 2114 . . 2137 2141 + BlsI GCNGC 2139 2138 . . 2137 2141 + BisI GCNGC 2138 2139 . . 2137 2141 + BbvI GCAGC 2149 2153 . . 2137 2141 + TseI GCWGC 2137 2140 . . 2138 2143 + PvuII CAGCTG 2140 2140 . . 2138 2143 + NspBII* CMGCKG 2140 2140 . . 2139 2142 + SetI ASST 2142 2138 . . 2139 2142 + CviJI RGCY 2140 2140 . . 2139 2142 + AluI AGCT 2140 2140 . . 2140 2150 + MwoI GCNNNNNNNGC 2146 2143 . . 2145 2148 + TspEI AATT 2144 2148 . . 2166 2169 + CviJI RGCY 2167 2167 . . 2167 2173 + EspI* GCTNAGC 2168 2171 . . 2168 2172 + DdeI CTNAG 2168 2171 . . 2165 2170 - TsoI TARCCA 2155 2153 . . 2173 2182 + MslI CAYNNNNRTG 2177 2177 . . 2173 2176 + FatI CATG 2172 2176 . . 2173 2176 + NlaIII CATG 2176 2172 . . 2173 2176 + CviAII CATG 2173 2175 . . 2175 2180 - TsoI TARCCA 2165 2163 . . 2188 2192 - BccI CCATC 2182 2183 . . 2197 2201 + Tsp4CI* ACNGT 2199 2198 . . 2206 2210 + MboII GAAGA 2218 2217 . . 2210 2214 + TspDTI ATGAA 2225 2223 . . 2218 2223 + BseRI GAGGAG 2233 2231 . . 2218 2221 - MnlI CCTC 2211 2210 . . 2237 2241 + TspDTI ATGAA 2252 2250 . . 2239 2243 + MboII GAAGA 2251 2250 . . 2239 2244 + BbvII* GAAGAC 2246 2250 . . 2247 2252 + XhoII RGATCY 2247 2251 . . 2247 2251 + BinI* GGATC 2255 2256 . . 2248 2251 + DpnI GATC 2249 2249 . . 2248 2251 + BstKTI GATC 2250 2248 . . 2248 2251 + MboI GATC 2247 2251 . . 2261 2265 + MaeIII GTNAC 2260 2265 . . 2268 2271 + CviJI RGCY 2269 2269 . . 2302 2306 - BccI CCATC 2296 2297 . . 2308 2311 + Csp6I GTAC 2308 2310 . . 2308 2311 + RsaI GTAC 2309 2309 . . 2314 2318 + Tsp4CI* ACNGT 2316 2315 . . 2317 2322 + Hpy166II GTNNAC 2319 2319 . . 2308 2320 - PsrI GAACNNNNNNTAC 2332 2327 2300 2295 2330 2333 + TaiI ACGT 2333 2329 . . 2330 2333 + SetI ASST 2333 2329 . . 2330 2333 + MaeII ACGT 2330 2332 . . 2335 2339 + TspDTI ATGAA 2350 2348 . . 2340 2343 + CviJI RGCY 2341 2341 . . 2344 2347 + MseI TTAA 2344 2346 . . 2355 2360 + AhaIII* TTTAAA 2357 2357 . . 2356 2359 + MseI TTAA 2356 2358 . . 2358 2363 + ApoI RAATTY 2358 2362 . . 2359 2362 + TspEI AATT 2358 2362 . . 2365 2368 + FatI CATG 2364 2368 . . 2365 2368 + NlaIII CATG 2368 2364 . . 2365 2368 + CviAII CATG 2365 2367 . . 2370 2373 + TspEI AATT 2369 2373 . . 2374 2377 + TaiI ACGT 2377 2373 . . 2374 2377 + SetI ASST 2377 2373 . . 2374 2377 + MaeII ACGT 2374 2376 . . 2382 2386 + HgaI GACGC 2391 2396 . . 2384 2387 + FnuDII* CGCG 2385 2385 . . 2391 2395 - TspDTI ATGAA 2381 2379 . . 2406 2410 + Tsp4CI* ACNGT 2408 2407 . . 2417 2422 + EcoT22I ATGCAT 2421 2417 . . 2418 2421 + CviRI* TGCA 2419 2419 . . 2425 2428 + MseI TTAA 2425 2427 . . 2434 2438 + TspDTI ATGAA 2449 2447 . . 2444 2448 + TspGWI ACGGA 2459 2457 . . 2446 2451 + XhoII RGATCY 2446 2450 . . 2446 2450 + BinI* GGATC 2454 2455 . . 2447 2450 + DpnI GATC 2448 2448 . . 2447 2450 + BstKTI GATC 2449 2447 . . 2447 2450 + MboI GATC 2446 2450 . . 2450 2455 + SmlI CTYRAG 2450 2454 . . 2451 2456 + Hpy178III* TCNNGA 2452 2454 . . 2450 2455 - Bce83I* CTTGAG 2435 2433 . . 2463 2467 + BsrI ACTGG 2468 2466 . . 2463 2468 + BfiI ACTGGG 2473 2472 . . 2477 2480 + TaqI TCGA 2477 2479 . . 2480 2484 + TspDTI ATGAA 2495 2493 . . 2490 2494 + MaeIII GTNAC 2489 2494 . . 2526 2529 + FatI CATG 2525 2529 . . 2526 2529 + NlaIII CATG 2529 2525 . . 2526 2529 + CviAII CATG 2526 2528 . . 2534 2539 + TsoI TARCCA 2550 2548 . . 2535 2538 + CviJI RGCY 2536 2536 . . 2549 2554 + MmeI TCCRAC 2574 2572 . . 2537 2550 - AjuI GAANNNNNNNTTGG 2562 2557 2530 2525 2566 2571 + SspI AATATT 2568 2568 . . 2572 2576 + Hpy188I TCNGA 2574 2573 . . 2578 2583 + MfeI CAATTG 2578 2582 . . 2579 2582 + TspEI AATT 2578 2582 . . 2586 2589 + TspEI AATT 2585 2589 . . 2594 2597 + FatI CATG 2593 2597 . . 2594 2597 + NlaIII CATG 2597 2593 . . 2594 2597 + CviAII CATG 2594 2596 . . 2616 2620 + MaeIII GTNAC 2615 2620 . . 2623 2627 + HgaI GACGC 2632 2637 . . 2625 2628 + FnuDII* CGCG 2626 2626 . . 2626 2629 - AciI CCGC 2626 2628 . . 2626 2630 - FauI CCCGC 2619 2621 . . 2631 2636 + SspI AATATT 2633 2633 . . 2637 2644 + PmeI GTTTAAAC 2640 2640 . . 2638 2643 + AhaIII* TTTAAA 2640 2640 . . 2639 2642 + MseI TTAA 2639 2641 . . 2650 2654 + TspDTI ATGAA 2665 2663 . . 2652 2656 + MboII GAAGA 2664 2663 . . 2678 2681 + SetI ASST 2681 2677 . . 2678 2681 + CviJI RGCY 2679 2679 . . 2678 2681 + AluI AGCT 2679 2679 . . 2695 2699 + MboII GAAGA 2707 2706 . . 2700 2703 + CviJI RGCY 2701 2701 . . 2701 2711 + MwoI GCNNNNNNNGC 2707 2704 . . 2709 2712 + CviJI RGCY 2710 2710 . . 2712 2715 + FatI CATG 2711 2715 . . 2712 2715 + NlaIII CATG 2715 2711 . . 2712 2715 + CviAII CATG 2712 2714 . . 2713 2717 + TspDTI ATGAA 2728 2726 . . 2721 2725 + FokI GGATG 2734 2738 . . 2721 2725 + BseGI GGATG 2727 2725 . . 2719 2722 - MnlI CCTC 2712 2711 . . 2725 2729 - BsmAI GTCTC 2719 2723 . . 2736 2741 + ApoI RAATTY 2736 2740 . . 2737 2740 + TspEI AATT 2736 2740 . . #--------------------------------------- # # # AccI: # [GTMKAC] # 866 1879 # # AciI: # [CCGC] # 12 119 185 185 394 572 # 636 642 # # AclI: # [AACGTT] # 10 731 2004 # # AflII: # [CTTAAG] # 702 2043 # # AhaIII*: # [TTTAAA] # 105 283 347 513 707 790 # # AjuI: # [GAANNNNNNNTTGG] # 32 183 2530 # # AluI: # [AGCT] # 52 66 66 69 116 128 # 147 154 181 203 252 298 # 474 539 # # ApoI: # [RAATTY] # 9 11 34 102 141 157 # 169 202 378 547 995 # # AsuI*: # [GGNCC] # 667 2078 # # AsuII: # [TTCGAA] # 1126 1619 # # AvaII: # [GGWCC] # 667 2078 # # BbvI: # [GCAGC] # 435 496 519 596 699 # # BbvII*: # [GAAGAC] # 6 12 216 499 543 606 # 863 # # BccI: # [CCATC] # 64 66 114 139 185 194 # 449 549 985 # # Bce83I*: # [CTTGAG] # 310 726 844 865 # # BceAI: # [ACGGC] # 120 198 713 1714 # # BcgI: # [CGANNNNNNTGC] # 34 1024 1687 # # BfiI: # [ACTGGG] # 272 548 590 1335 # # BinI*: # [GGATC] # 199 204 286 291 510 1255 # # BisI: # [GCNGC] # 153 185 239 366 471 607 # 724 # # BlsI: # [GCNGC] # 153 186 239 366 471 606 # 724 # # BmgT120I: # [GGNCC] # 668 2077 # # BplI: # [GAGNNNNNCTC] # 0 0 32 1320 1393 # # BsaAI: # [YACGTR] # 1317 1428 # # BsaBI: # [GATNNNNATC] # 1137 1608 # # BseBI: # [CCWGG] # 214 399 829 1303 # # BseGI: # [GGATG] # 18 111 465 2151 # # BseRI: # [GAGGAG] # 512 2233 # # BseYI: # [CCCAGC] # 187 2558 # # BsgI: # [GTGCAG] # 1261 1484 # # BsiYI*: # [CCNNNNNNNGG] # 1298 1447 # # BslFI: # [GGGAC] # 204 2541 # # BsmAI: # [GTCTC] # 26 216 284 2219 # # Bsp1407I: # [TGTACA] # 770 966 1009 # # BsrDI: # [GCAATG] # 187 774 1784 # # BsrI: # [ACTGG] # 87 277 503 543 1335 # # BssKI: # [CCNGG] # 212 399 829 1305 # # BssNAI: # [GTATAC] # 865 1880 # # BstAPI: # [GCANNNNNTGC] # 623 729 1393 # # BstKTI: # [GATC] # 161 199 212 286 296 349 # 1242 # # BstXI: # [CCANNNNNNTGG] # 456 942 1347 # # BtrI: # [CACGTC] # 717 2028 # # BtsI: # [GCAGTG] # 401 2344 # # Cfr10I: # [RCCGGY] # 1347 1398 # # ClaI: # [ATCGAT] # 68 2677 # # Csp6I: # [GTAC] # 301 437 469 571 967 # # CviAII: # [CATG] # 33 68 97 118 161 171 # 192 463 570 872 # # CviJI: # [RGCY] # 9 10 11 20 22 27 # 29 31 35 39 39 46 # 52 66 69 72 75 78 # 81 87 94 102 108 116 # 117 143 174 184 189 195 # 204 221 # # CviRI*: # [TGCA] # 17 27 60 71 99 103 # 114 177 205 288 312 318 # 326 628 # # DdeI: # [CTNAG] # 577 2168 # # DpnI: # [GATC] # 161 199 211 286 297 349 # 1242 # # DraII: # [RGGNCCY] # 667 2078 # # DsaI*: # [CCRYGG] # 1036 1709 # # Eco57I: # [CTGAAG] # 103 703 1939 # # Eco57MI: # [CTGRAG] # 103 703 1939 # # EcoNI: # [CCTNNNNNAGG] # 1300 1445 # # EcoRI: # [GAATTC] # 1363 1382 # # EcoRII: # [CCWGG] # 212 399 829 1305 # # EcoRV: # [GATATC] # 242 795 1708 # # EcoT22I: # [ATGCAT] # 324 2421 # # EspI*: # [GCTNAGC] # 577 2168 # # FatI: # [CATG] # 34 68 97 118 161 170 # 192 463 570 872 # # FauI: # [CCCGC] # 126 2619 # # FnuDII*: # [CGCG] # 119 241 1020 1365 # # FokI: # [GGATG] # 11 111 472 2151 # # GsaI: # [CCCAGC] # 191 2554 # # HaeIII: # [GGCC] # 926 1819 # # HgaI: # [GACGC] # 42 113 241 246 331 390 # 1382 # # HgiJII*: # [GRGCYC] # 261 2484 # # Hin4I: # [GAYNNNNNVTC] # 0 0 32 754 1959 # # Hin4II*: # [CCTTC] # 9 201 630 1905 # # HindII: # [GTYRAC] # 1135 1610 # # HindIII: # [AAGCTT] # 578 2167 # # HinfI: # [GANTC] # 6 222 303 336 430 636 # 812 # # HpaI: # [GTTAAC] # 1135 1610 # # HpaII: # [CCGG] # 1348 1397 # # HphI: # [GGTGA] # 67 86 169 580 632 1211 # # Hpy166II: # [GTNNAC] # 9 15 18 246 426 439 # 442 555 595 # # Hpy178III*: # [TCNNGA] # 118 128 180 234 293 319 # 374 1099 # # Hpy188I: # [TCNGA] # 18 53 55 63 80 157 # 171 172 233 237 339 1167 # # Hpy99I: # [CGWCG] # 802 1943 # # Ksp632I*: # [CTCTTC] # 14 76 223 421 584 639 # 788 # # MaeI: # [CTAG] # 44 70 87 148 189 255 # 284 748 920 # # MaeII: # [ACGT] # 10 13 44 196 303 348 # 371 391 442 627 # # MaeIII: # [GTNAC] # 61 82 126 130 229 547 # 1570 # # MboI: # [GATC] # 161 199 209 286 299 349 # 1242 # # MboII: # [GAAGA] # 3 3 3 3 3 6 # 6 6 14 33 35 38 # 43 88 90 93 95 102 # 112 135 136 153 166 196 # 217 413 553 # # MfeI: # [CAATTG] # 167 829 1749 # # MlyI: # [GAGTC] # 9 228 288 818 1402 # # MmeI: # [TCCRAC] # 171 243 901 1430 # # MnlI: # [CCTC] # 1 22 24 33 39 60 # 61 66 67 76 97 187 # 397 470 501 644 # # MseI: # [TTAA] # 8 12 22 26 32 38 # 40 66 69 71 78 79 # 84 85 94 106 121 129 # 150 153 214 263 300 505 # # MslI: # [CAYNNNNRTG] # 568 2177 # # MwoI: # [GCNNNNNNNGC] # 33 38 97 126 367 412 # 497 561 614 # # NcoI: # [CCATGG] # 1036 1709 # # NlaIII: # [CATG] # 30 68 97 118 161 174 # 192 463 570 872 # # NlaIV: # [GGNNCC] # 599 2146 # # NspBII*: # [CMGCKG] # 187 605 634 1319 # # PfoI: # [TCCNGGA] # 212 2533 # # PleI: # [GAGTC] # 8 228 289 818 1402 # # PmeI: # [GTTTAAAC] # 105 2640 # # PpiI: # [GAACNNNNNCTC] # 32 383 2330 # # PpuMI: # [RGGWCCY] # 667 2078 # # PsrI: # [GAACNNNNNNTAC] # 32 413 2300 # # PstI: # [CTGCAG] # 408 2337 # # PvuII: # [CAGCTG] # 605 2140 # # RsaI: # [GTAC] # 301 436 469 571 968 # # SapI: # [GCTCTTC] # 223 639 1883 # # ScrFI: # [CCNGG] # 214 399 829 1303 # # SduI: # [GDGCHC] # 261 2484 # # SecI*: # [CCNNGG] # 10 302 601 796 1036 # # SetI: # [ASST] # 5 9 13 13 14 16 # 18 24 27 27 30 32 # 40 42 44 46 48 50 # 51 52 60 64 65 69 # 74 87 115 122 127 128 # 147 179 191 198 214 304 # # SfaNI: # [GCATC] # 38 45 78 200 276 441 # 651 1016 # # SfeI*: # [CTRYAG] # 324 404 414 745 858 # # SmlI: # [CTYRAG] # 295 319 407 844 880 # # SspI: # [AATATT] # 55 65 112 564 697 1252 # # StyI: # [CCWWGG] # 312 601 796 1036 # # SwaI: # [ATTTAAAT] # 1137 1608 # # TaiI: # [ACGT] # 13 13 44 196 303 348 # 368 391 442 627 # # TaqI: # [TCGA] # 68 180 246 268 303 329 # 374 400 577 # # TatI: # [WGTACW] # 770 966 1009 # # TauI: # [GCSGC] # 187 758 1800 # # TfiI: # [GAWTC] # 336 430 1979 # # TseI: # [GCWGC] # 423 471 519 608 724 # # TsoI: # [TARCCA] # 10 195 346 385 1809 # # Tsp45I: # [GTSAC] # 1114 1631 # # Tsp4CI*: # [ACNGT] # 30 92 106 117 121 178 # 195 238 337 365 434 532 # # TspDTI: # [ATGAA] # 6 15 17 27 31 46 # 63 68 98 126 170 219 # 237 369 404 849 # # TspEI: # [AATT] # 7 9 9 9 10 10 # 11 11 15 27 34 37 # 61 67 98 102 129 140 # 151 157 169 202 208 209 # 214 282 367 # # TspGWI: # [ACGGA] # 22 189 286 423 565 1260 # # TspRI: # [CASTGNN] # 408 867 1470 # # VspI: # [ATTAAT] # 560 2185 # # XhoII: # [RGATCY] # 199 299 1005 1242 # # XmnI: # [GAANNNNTTC] # 172 1191 1382 # #--------------------------------------- #--------------------------------------- # Total_sequences: 1 # Total_length: 2745 # Reported_sequences: 1 # Reported_hitcount: 596 #---------------------------------------